RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 NISCHQ9Y2I1 1504 aa32.89■■■□□ 2.86
CCDC12-211ENST00000604367 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
CCDC12-211ENST00000604367 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
CCDC12-211ENST00000604367 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
CCDC12-211ENST00000604367 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
CCDC12-211ENST00000604367 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
CCDC12-211ENST00000604367 ABCC9O60706 1549 aa26.71■■□□□ 1.87
CCDC12-211ENST00000604367 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
CCDC12-211ENST00000604367 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
CCDC12-211ENST00000604367 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
CCDC12-211ENST00000604367 NACADO15069 1562 aa26.33■■□□□ 1.8
CCDC12-211ENST00000604367 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
CCDC12-211ENST00000604367 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
CCDC12-211ENST00000604367 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
CCDC12-211ENST00000604367 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
CCDC12-211ENST00000604367 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
CCDC12-211ENST00000604367 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
CCDC12-211ENST00000604367 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
CCDC12-211ENST00000604367 WIZO95785 1651 aa25.35■■□□□ 1.65
CCDC12-211ENST00000604367 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.65
CCDC12-211ENST00000604367 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
CCDC12-211ENST00000604367 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
CCDC12-211ENST00000604367 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
CCDC12-211ENST00000604367 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
CCDC12-211ENST00000604367 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
CCDC12-211ENST00000604367 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
CCDC12-211ENST00000604367 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
CCDC12-211ENST00000604367 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
CCDC12-211ENST00000604367 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
CCDC12-211ENST00000604367 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
CCDC12-211ENST00000604367 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
CCDC12-211ENST00000604367 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
CCDC12-211ENST00000604367 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
CCDC12-211ENST00000604367 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
CCDC12-211ENST00000604367 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
CCDC12-211ENST00000604367 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
CCDC12-211ENST00000604367 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
CCDC12-211ENST00000604367 SOGA1O94964 1423 aa24.18■■□□□ 1.46
CCDC12-211ENST00000604367 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
CCDC12-211ENST00000604367 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
CCDC12-211ENST00000604367 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
CCDC12-211ENST00000604367 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.44
CCDC12-211ENST00000604367 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
CCDC12-211ENST00000604367 EEA1Q15075 1411 aa23.99■■□□□ 1.43
CCDC12-211ENST00000604367 CFTRP13569 1480 aa23.96■■□□□ 1.43
CCDC12-211ENST00000604367 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
CCDC12-211ENST00000604367 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
CCDC12-211ENST00000604367 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
CCDC12-211ENST00000604367 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
CCDC12-211ENST00000604367 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
CCDC12-211ENST00000604367 CUX1P39880 1505 aa23.8■■□□□ 1.4
CCDC12-211ENST00000604367 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
CCDC12-211ENST00000604367 GOLGA3Q08378 1498 aa23.78■■□□□ 1.4
CCDC12-211ENST00000604367 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
CCDC12-211ENST00000604367 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
CCDC12-211ENST00000604367 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
CCDC12-211ENST00000604367 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
CCDC12-211ENST00000604367 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
CCDC12-211ENST00000604367 HRCP23327 699 aa23.7■■□□□ 1.38
CCDC12-211ENST00000604367 KIF21BO75037 1637 aa23.68■■□□□ 1.38
CCDC12-211ENST00000604367 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
CCDC12-211ENST00000604367 NESP48681 1621 aa23.59■■□□□ 1.37
CCDC12-211ENST00000604367 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
CCDC12-211ENST00000604367 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
CCDC12-211ENST00000604367 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
CCDC12-211ENST00000604367 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
CCDC12-211ENST00000604367 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
CCDC12-211ENST00000604367 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
CCDC12-211ENST00000604367 CLIP1P30622 1438 aa23.48■■□□□ 1.35
CCDC12-211ENST00000604367 CUX2O14529 1486 aa23.46■■□□□ 1.35
CCDC12-211ENST00000604367 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
CCDC12-211ENST00000604367 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
CCDC12-211ENST00000604367 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
CCDC12-211ENST00000604367 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
CCDC12-211ENST00000604367 IGF1RP08069 1367 aa23.34■■□□□ 1.33
CCDC12-211ENST00000604367 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
CCDC12-211ENST00000604367 POLA1P09884 1462 aaPredicted RBP23.31■■□□□ 1.32
CCDC12-211ENST00000604367 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
CCDC12-211ENST00000604367 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
CCDC12-211ENST00000604367 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
CCDC12-211ENST00000604367 CARMIL1Q5VZK9 1371 aa23.24■■□□□ 1.31
CCDC12-211ENST00000604367 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
CCDC12-211ENST00000604367 ABCA10Q8WWZ4 1543 aa23.21■■□□□ 1.31
CCDC12-211ENST00000604367 APLP2Q06481 763 aa23.19■■□□□ 1.3
CCDC12-211ENST00000604367 ARAP1Q96P48 1450 aa23.16■■□□□ 1.3
CCDC12-211ENST00000604367 ARHGAP35Q9NRY4 1499 aa23.09■■□□□ 1.29
CCDC12-211ENST00000604367 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
CCDC12-211ENST00000604367 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
CCDC12-211ENST00000604367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
CCDC12-211ENST00000604367 WDR97A6NE52 1622 aa23.05■■□□□ 1.28
CCDC12-211ENST00000604367 CUL7Q14999 1698 aa22.99■■□□□ 1.27
CCDC12-211ENST00000604367 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
CCDC12-211ENST00000604367 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
CCDC12-211ENST00000604367 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
CCDC12-211ENST00000604367 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
CCDC12-211ENST00000604367 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
CCDC12-211ENST00000604367 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
CCDC12-211ENST00000604367 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
CCDC12-211ENST00000604367 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
CCDC12-211ENST00000604367 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-9■■■■□ 26.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms