RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-205ENST00000420665 NISCHQ9Y2I1 1504 aa58.57■■■■■ 6.97
LRRFIP1-205ENST00000420665 CCDC180Q9P1Z9 1646 aa52.11■■■■■ 5.93
LRRFIP1-205ENST00000420665 ABCC9O60706 1549 aa51.01■■■■■ 5.76
LRRFIP1-205ENST00000420665 RB1CC1Q8TDY2 1594 aa49.05■■■■■ 5.44
LRRFIP1-205ENST00000420665 NACADO15069 1562 aa48.97■■■■■ 5.43
LRRFIP1-205ENST00000420665 DCAF8L2P0C7V8 631 aa48.89■■■■■ 5.42
LRRFIP1-205ENST00000420665 ZCCHC6Q5VYS8 1495 aaKnown RBP48.8■■■■■ 5.4
LRRFIP1-205ENST00000420665 MYO15BQ96JP2 1530 aa48.65■■■■■ 5.38
LRRFIP1-205ENST00000420665 DCAF1Q9Y4B6 1507 aa48.44■■■■■ 5.35
LRRFIP1-205ENST00000420665 UNC13AQ9UPW8 1703 aa47.94■■■■■ 5.26
LRRFIP1-205ENST00000420665 PABPN1Q86U42 306 aaKnown RBP eCLIP47.62■■■■■ 5.21
LRRFIP1-205ENST00000420665 SCRIBQ14160 1630 aa47.57■■■■■ 5.21
LRRFIP1-205ENST00000420665 BICRAQ9NZM4 1560 aa47.57■■■■■ 5.21
LRRFIP1-205ENST00000420665 SHROOM4Q9ULL8 1493 aa47.06■■■■■ 5.12
LRRFIP1-205ENST00000420665 DNAJC5BQ9UF47 199 aa46.77■■■■■ 5.08
LRRFIP1-205ENST00000420665 EIF4G1Q04637 1599 aaKnown RBP46.32■■■■■ 5.01
LRRFIP1-205ENST00000420665 CC2D2AQ9P2K1 1620 aa46.14■■■■■ 4.98
LRRFIP1-205ENST00000420665 CECR2Q9BXF3 1484 aa45.82■■■■■ 4.93
LRRFIP1-205ENST00000420665 SMARCA4P51532 1647 aa45.48■■■■■ 4.87
LRRFIP1-205ENST00000420665 BAZ1AQ9NRL2 1556 aaPredicted RBP45.41■■■■■ 4.86
LRRFIP1-205ENST00000420665 ATAD2BQ9ULI0 1458 aa45.21■■■■■ 4.83
LRRFIP1-205ENST00000420665 NCAPD3P42695 1498 aa45.17■■■■■ 4.82
LRRFIP1-205ENST00000420665 SMARCA2P51531 1590 aa45.16■■■■■ 4.82
LRRFIP1-205ENST00000420665 MROH2BQ7Z745 1585 aa45.15■■■■■ 4.82
LRRFIP1-205ENST00000420665 PEG3Q9GZU2 1588 aa45.01■■■■■ 4.8
LRRFIP1-205ENST00000420665 HMGXB3Q12766 1538 aa44.99■■■■■ 4.79
LRRFIP1-205ENST00000420665 BAZ1BQ9UIG0 1483 aaKnown RBP44.85■■■■■ 4.77
LRRFIP1-205ENST00000420665 WIZO95785 1651 aa44.67■■■■■ 4.74
LRRFIP1-205ENST00000420665 RSF1Q96T23 1441 aaPredicted RBP44.6■■■■■ 4.73
LRRFIP1-205ENST00000420665 TOP2AP11388 1531 aaKnown RBP44.2■■■■■ 4.67
LRRFIP1-205ENST00000420665 NESP48681 1621 aa44.13■■■■■ 4.66
LRRFIP1-205ENST00000420665 LAMC3Q9Y6N6 1575 aa44.01■■■■■ 4.64
LRRFIP1-205ENST00000420665 ERCC6Q03468 1493 aa43.97■■■■■ 4.63
LRRFIP1-205ENST00000420665 CADPSQ9ULU8 1353 aa43.84■■■■■ 4.61
LRRFIP1-205ENST00000420665 PDS5BQ9NTI5 1447 aa43.69■■■■■ 4.58
LRRFIP1-205ENST00000420665 CCDC88BA6NC98 1476 aa43.64■■■■■ 4.58
LRRFIP1-205ENST00000420665 KIF21AQ7Z4S6 1674 aa43.62■■■■■ 4.57
LRRFIP1-205ENST00000420665 CFTRP13569 1480 aa43.6■■■■■ 4.57
LRRFIP1-205ENST00000420665 CUX2O14529 1486 aa43.5■■■■■ 4.55
LRRFIP1-205ENST00000420665 THOC2Q8NI27 1593 aaKnown RBP43.5■■■■■ 4.55
LRRFIP1-205ENST00000420665 SUPT5HO00267 1087 aaKnown RBP43.43■■■■■ 4.54
LRRFIP1-205ENST00000420665 FANCD2Q9BXW9 1451 aa43.38■■■■■ 4.53
LRRFIP1-205ENST00000420665 CEP164Q9UPV0 1460 aa43.34■■■■■ 4.53
LRRFIP1-205ENST00000420665 PRDM2Q13029 1718 aa43.3■■■■■ 4.52
LRRFIP1-205ENST00000420665 MRC2Q9UBG0 1479 aa43.28■■■■■ 4.52
LRRFIP1-205ENST00000420665 WDR62O43379 1518 aa43.15■■■■■ 4.5
LRRFIP1-205ENST00000420665 URB2Q14146 1524 aaKnown RBP42.96■■■■■ 4.47
LRRFIP1-205ENST00000420665 TOPBP1Q92547 1522 aa42.68■■■■■ 4.42
LRRFIP1-205ENST00000420665 DNMBPQ6XZF7 1577 aa42.65■■■■■ 4.42
LRRFIP1-205ENST00000420665 ABCC8Q09428 1581 aa42.64■■■■■ 4.42
LRRFIP1-205ENST00000420665 IFT140Q96RY7 1462 aa42.41■■■■■ 4.38
LRRFIP1-205ENST00000420665 CUX1P39880 1505 aa42.37■■■■■ 4.37
LRRFIP1-205ENST00000420665 POLA1P09884 1462 aaPredicted RBP42.33■■■■■ 4.37
LRRFIP1-205ENST00000420665 ZNF608Q9ULD9 1512 aaPredicted RBP42.24■■■■■ 4.35
LRRFIP1-205ENST00000420665 TARBP1Q13395 1621 aaKnown RBP42.23■■■■■ 4.35
LRRFIP1-205ENST00000420665 FGD5Q6ZNL6 1462 aa42.23■■■■■ 4.35
LRRFIP1-205ENST00000420665 RAD54L2Q9Y4B4 1467 aa42.13■■■■■ 4.34
LRRFIP1-205ENST00000420665 DNAJC5Q9H3Z4 198 aa42.13■■■■■ 4.33
LRRFIP1-205ENST00000420665 SOGA1O94964 1423 aa42.12■■■■■ 4.33
LRRFIP1-205ENST00000420665 EIF4G3O43432 1585 aaKnown RBP42.11■■■■■ 4.33
LRRFIP1-205ENST00000420665 WRNQ14191 1432 aaPredicted RBP eCLIP42.07■■■■■ 4.33
LRRFIP1-205ENST00000420665 SYNJ1O43426 1573 aa42■■■■■ 4.31
LRRFIP1-205ENST00000420665 TOP2BQ02880 1626 aa41.99■■■■■ 4.31
LRRFIP1-205ENST00000420665 BIVM-ERCC5R4GMW8 1640 aa41.99■■■■■ 4.31
LRRFIP1-205ENST00000420665 AQRO60306 1485 aaKnown RBP eCLIP41.98■■■■■ 4.311e-7■■■■■ 27.6
LRRFIP1-205ENST00000420665 WDR97A6NE52 1622 aa41.9■■■■■ 4.3
LRRFIP1-205ENST00000420665 TDRD9Q8NDG6 1382 aaKnown RBP41.89■■■■■ 4.3
LRRFIP1-205ENST00000420665 ABCA10Q8WWZ4 1543 aa41.79■■■■■ 4.28
LRRFIP1-205ENST00000420665 ABCA5Q8WWZ7 1642 aa41.67■■■■■ 4.26
LRRFIP1-205ENST00000420665 GRIN2BQ13224 1484 aa41.65■■■■■ 4.26
LRRFIP1-205ENST00000420665 GAPVD1Q14C86 1478 aa41.65■■■■■ 4.26
LRRFIP1-205ENST00000420665 OSCARQ8IYS5 282 aa41.63■■■■■ 4.25
LRRFIP1-205ENST00000420665 SNAPC4Q5SXM2 1469 aa41.63■■■■■ 4.25
LRRFIP1-205ENST00000420665 PBRM1Q86U86 1689 aa41.6■■■■■ 4.25
LRRFIP1-205ENST00000420665 CHD1O14646 1710 aa41.57■■■■■ 4.25
LRRFIP1-205ENST00000420665 MAGI1Q96QZ7 1491 aaPredicted RBP41.55■■■■■ 4.24
LRRFIP1-205ENST00000420665 FBLN2P98095 1184 aa41.46■■■■■ 4.23
LRRFIP1-205ENST00000420665 SYNJ2O15056 1496 aa41.4■■■■■ 4.22
LRRFIP1-205ENST00000420665 CHMP7Q8WUX9 453 aaPredicted RBP41.33■■■■■ 4.21
LRRFIP1-205ENST00000420665 ERICH3Q5RHP9 1530 aa41.3■■■■■ 4.2
LRRFIP1-205ENST00000420665 ADAMTS12P58397 1594 aa41.29■■■■■ 4.2
LRRFIP1-205ENST00000420665 KIF27Q86VH2 1401 aa41.18■■■■■ 4.18
LRRFIP1-205ENST00000420665 FHAD1B1AJZ9 1412 aa41.16■■■■■ 4.18
LRRFIP1-205ENST00000420665 GRIN2AQ12879 1464 aa41.13■■■■■ 4.17
LRRFIP1-205ENST00000420665 CLASP1Q7Z460 1538 aa41.11■■■■■ 4.17
LRRFIP1-205ENST00000420665 RIMBP3CA6NJZ7 1639 aa41.05■■■■■ 4.16
LRRFIP1-205ENST00000420665 RIMBP3BA6NNM3 1639 aa41.05■■■■■ 4.16
LRRFIP1-205ENST00000420665 RIMBP3Q9UFD9 1639 aa41.05■■■■■ 4.16
LRRFIP1-205ENST00000420665 ARHGEF11O15085 1522 aa41.03■■■■■ 4.16
LRRFIP1-205ENST00000420665 TRIM41Q8WV44 630 aa41■■■■■ 4.15
LRRFIP1-205ENST00000420665 IGF1RP08069 1367 aa40.99■■■■■ 4.15
LRRFIP1-205ENST00000420665 CEP170Q5SW79 1584 aa40.95■■■■■ 4.15
LRRFIP1-205ENST00000420665 CUL7Q14999 1698 aa40.94■■■■■ 4.15
LRRFIP1-205ENST00000420665 NUP160Q12769 1436 aa40.94■■■■■ 4.14
LRRFIP1-205ENST00000420665 RUSC2Q8N2Y8 1516 aa40.8■■■■■ 4.12
LRRFIP1-205ENST00000420665 CARMIL1Q5VZK9 1371 aa40.75■■■■■ 4.11
LRRFIP1-205ENST00000420665 ARAP1Q96P48 1450 aa40.71■■■■■ 4.11
LRRFIP1-205ENST00000420665 SHROOM2Q13796 1616 aa40.64■■■■■ 4.1
LRRFIP1-205ENST00000420665 CYB5RLQ6IPT4 315 aa40.6■■■■■ 4.09
LRRFIP1-205ENST00000420665 ERCC6L2Q5T890 1561 aa40.55■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms