RNA–Protein interactions for RNA: ENST00000513732.2

GPBP1-207, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 3

Gene GPBP1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-207ENST00000513732 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
GPBP1-207ENST00000513732 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
GPBP1-207ENST00000513732 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
GPBP1-207ENST00000513732 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
GPBP1-207ENST00000513732 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
GPBP1-207ENST00000513732 FOXD1Q16676 465 aa19.95■□□□□ 0.78
GPBP1-207ENST00000513732 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
GPBP1-207ENST00000513732 ADRA2BP18089 450 aa19.67■□□□□ 0.74
GPBP1-207ENST00000513732 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
GPBP1-207ENST00000513732 KCNA4P22459 653 aa18.83■□□□□ 0.6
GPBP1-207ENST00000513732 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
GPBP1-207ENST00000513732 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
GPBP1-207ENST00000513732 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
GPBP1-207ENST00000513732 MSH5O43196 834 aa18.12■□□□□ 0.49
GPBP1-207ENST00000513732 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
GPBP1-207ENST00000513732 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
GPBP1-207ENST00000513732 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
GPBP1-207ENST00000513732 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
GPBP1-207ENST00000513732 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
GPBP1-207ENST00000513732 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
GPBP1-207ENST00000513732 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
GPBP1-207ENST00000513732 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
GPBP1-207ENST00000513732 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
GPBP1-207ENST00000513732 ZBTB22O15209 634 aa17.38■□□□□ 0.37
GPBP1-207ENST00000513732 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
GPBP1-207ENST00000513732 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
GPBP1-207ENST00000513732 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
GPBP1-207ENST00000513732 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
GPBP1-207ENST00000513732 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
GPBP1-207ENST00000513732 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
GPBP1-207ENST00000513732 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
GPBP1-207ENST00000513732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.23e-6■□□□□ 10.8
GPBP1-207ENST00000513732 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
GPBP1-207ENST00000513732 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
GPBP1-207ENST00000513732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
GPBP1-207ENST00000513732 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
GPBP1-207ENST00000513732 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
GPBP1-207ENST00000513732 FKBP8Q14318 412 aa15.94■□□□□ 0.14
GPBP1-207ENST00000513732 APLP2Q06481 763 aa15.79■□□□□ 0.12
GPBP1-207ENST00000513732 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
GPBP1-207ENST00000513732 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
GPBP1-207ENST00000513732 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
GPBP1-207ENST00000513732 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
GPBP1-207ENST00000513732 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
GPBP1-207ENST00000513732 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
GPBP1-207ENST00000513732 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
GPBP1-207ENST00000513732 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
GPBP1-207ENST00000513732 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
GPBP1-207ENST00000513732 CAPN15O75808 1086 aa15.39■□□□□ 0.05
GPBP1-207ENST00000513732 POLA2Q14181 598 aa15.38■□□□□ 0.05
GPBP1-207ENST00000513732 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
GPBP1-207ENST00000513732 FBLN2P98095 1184 aa15.33■□□□□ 0.04
GPBP1-207ENST00000513732 PROM2Q8N271 834 aa15.29■□□□□ 0.04
GPBP1-207ENST00000513732 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
GPBP1-207ENST00000513732 ABCB7O75027 752 aa15.18■□□□□ 0.02
GPBP1-207ENST00000513732 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
GPBP1-207ENST00000513732 DSG3P32926 999 aa15.07■□□□□ 0
GPBP1-207ENST00000513732 SLC24A1O60721 1099 aa15.03■□□□□ -0
GPBP1-207ENST00000513732 VASPP50552 380 aaPredicted RBP15.02■□□□□ -0
GPBP1-207ENST00000513732 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
GPBP1-207ENST00000513732 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
GPBP1-207ENST00000513732 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
GPBP1-207ENST00000513732 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
GPBP1-207ENST00000513732 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
GPBP1-207ENST00000513732 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
GPBP1-207ENST00000513732 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
GPBP1-207ENST00000513732 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
GPBP1-207ENST00000513732 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
GPBP1-207ENST00000513732 PKD2Q13563 968 aa14.62□□□□□ -0.07
GPBP1-207ENST00000513732 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
GPBP1-207ENST00000513732 KLHL34Q8N239 644 aa14.53□□□□□ -0.08
GPBP1-207ENST00000513732 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
GPBP1-207ENST00000513732 MIER1Q8N108 512 aa14.45□□□□□ -0.1
GPBP1-207ENST00000513732 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
GPBP1-207ENST00000513732 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
GPBP1-207ENST00000513732 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
GPBP1-207ENST00000513732 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
GPBP1-207ENST00000513732 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
GPBP1-207ENST00000513732 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
GPBP1-207ENST00000513732 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
GPBP1-207ENST00000513732 RGL2O15211 777 aa14.24□□□□□ -0.13
GPBP1-207ENST00000513732 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
GPBP1-207ENST00000513732 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
GPBP1-207ENST00000513732 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
GPBP1-207ENST00000513732 BBXQ8WY36 941 aaPredicted RBP14.16□□□□□ -0.14
GPBP1-207ENST00000513732 HAP1P54257 671 aaPredicted RBP14.14□□□□□ -0.15
GPBP1-207ENST00000513732 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
GPBP1-207ENST00000513732 NUBP1P53384 320 aa14.12□□□□□ -0.15
GPBP1-207ENST00000513732 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
GPBP1-207ENST00000513732 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
GPBP1-207ENST00000513732 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
GPBP1-207ENST00000513732 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
GPBP1-207ENST00000513732 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
GPBP1-207ENST00000513732 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
GPBP1-207ENST00000513732 GSE1Q14687 1217 aa14.06□□□□□ -0.16
GPBP1-207ENST00000513732 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
GPBP1-207ENST00000513732 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
GPBP1-207ENST00000513732 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
GPBP1-207ENST00000513732 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
GPBP1-207ENST00000513732 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms