RNA–Protein interactions for RNA: ENST00000404113.6

LPIN1-205, Transcript of lipin 1, humanhuman

TSL 1 (best)

Gene LPIN1, Length 4,005 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-205ENST00000404113 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
LPIN1-205ENST00000404113 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
LPIN1-205ENST00000404113 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
LPIN1-205ENST00000404113 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
LPIN1-205ENST00000404113 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
LPIN1-205ENST00000404113 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
LPIN1-205ENST00000404113 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
LPIN1-205ENST00000404113 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
LPIN1-205ENST00000404113 ABCC9O60706 1549 aa16.93■□□□□ 0.3
LPIN1-205ENST00000404113 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
LPIN1-205ENST00000404113 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
LPIN1-205ENST00000404113 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
LPIN1-205ENST00000404113 NACADO15069 1562 aa16.59■□□□□ 0.25
LPIN1-205ENST00000404113 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
LPIN1-205ENST00000404113 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
LPIN1-205ENST00000404113 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
LPIN1-205ENST00000404113 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
LPIN1-205ENST00000404113 WIZO95785 1651 aa16.4■□□□□ 0.22
LPIN1-205ENST00000404113 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.2
LPIN1-205ENST00000404113 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
LPIN1-205ENST00000404113 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
LPIN1-205ENST00000404113 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
LPIN1-205ENST00000404113 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
LPIN1-205ENST00000404113 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
LPIN1-205ENST00000404113 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
LPIN1-205ENST00000404113 TRIM41Q8WV44 630 aa16.02■□□□□ 0.15
LPIN1-205ENST00000404113 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
LPIN1-205ENST00000404113 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
LPIN1-205ENST00000404113 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
LPIN1-205ENST00000404113 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
LPIN1-205ENST00000404113 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
LPIN1-205ENST00000404113 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.14
LPIN1-205ENST00000404113 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.12
LPIN1-205ENST00000404113 HRCP23327 699 aa15.73■□□□□ 0.11
LPIN1-205ENST00000404113 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
LPIN1-205ENST00000404113 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
LPIN1-205ENST00000404113 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.1
LPIN1-205ENST00000404113 SOGA1O94964 1423 aa15.7■□□□□ 0.1
LPIN1-205ENST00000404113 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
LPIN1-205ENST00000404113 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
LPIN1-205ENST00000404113 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
LPIN1-205ENST00000404113 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
LPIN1-205ENST00000404113 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
LPIN1-205ENST00000404113 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
LPIN1-205ENST00000404113 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
LPIN1-205ENST00000404113 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
LPIN1-205ENST00000404113 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
LPIN1-205ENST00000404113 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
LPIN1-205ENST00000404113 CUX1P39880 1505 aa15.31■□□□□ 0.04
LPIN1-205ENST00000404113 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
LPIN1-205ENST00000404113 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
LPIN1-205ENST00000404113 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
LPIN1-205ENST00000404113 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.04
LPIN1-205ENST00000404113 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
LPIN1-205ENST00000404113 KIF21BO75037 1637 aa15.26■□□□□ 0.03
LPIN1-205ENST00000404113 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
LPIN1-205ENST00000404113 EEA1Q15075 1411 aa15.26■□□□□ 0.03
LPIN1-205ENST00000404113 CFTRP13569 1480 aa15.24■□□□□ 0.03
LPIN1-205ENST00000404113 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
LPIN1-205ENST00000404113 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
LPIN1-205ENST00000404113 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
LPIN1-205ENST00000404113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
LPIN1-205ENST00000404113 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
LPIN1-205ENST00000404113 CLIP1P30622 1438 aa15.12■□□□□ 0.01
LPIN1-205ENST00000404113 NESP48681 1621 aa15.11■□□□□ 0.01
LPIN1-205ENST00000404113 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
LPIN1-205ENST00000404113 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
LPIN1-205ENST00000404113 ARAP1Q96P48 1450 aa15.04■□□□□ -0
LPIN1-205ENST00000404113 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
LPIN1-205ENST00000404113 FGD5Q6ZNL6 1462 aa15.02□□□□□ -0.01
LPIN1-205ENST00000404113 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
LPIN1-205ENST00000404113 CUX2O14529 1486 aa14.98□□□□□ -0.01
LPIN1-205ENST00000404113 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
LPIN1-205ENST00000404113 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
LPIN1-205ENST00000404113 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
LPIN1-205ENST00000404113 IGF1RP08069 1367 aa14.95□□□□□ -0.02
LPIN1-205ENST00000404113 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
LPIN1-205ENST00000404113 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
LPIN1-205ENST00000404113 ARHGAP35Q9NRY4 1499 aa14.92□□□□□ -0.02
LPIN1-205ENST00000404113 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
LPIN1-205ENST00000404113 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
LPIN1-205ENST00000404113 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
LPIN1-205ENST00000404113 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
LPIN1-205ENST00000404113 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
LPIN1-205ENST00000404113 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
LPIN1-205ENST00000404113 KIF21AQ7Z4S6 1674 aa14.85□□□□□ -0.03
LPIN1-205ENST00000404113 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
LPIN1-205ENST00000404113 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
LPIN1-205ENST00000404113 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
LPIN1-205ENST00000404113 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
LPIN1-205ENST00000404113 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
LPIN1-205ENST00000404113 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
LPIN1-205ENST00000404113 PCF11O94913 1555 aaKnown RBP14.72□□□□□ -0.05
LPIN1-205ENST00000404113 ABCA5Q8WWZ7 1642 aa14.71□□□□□ -0.05
LPIN1-205ENST00000404113 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
LPIN1-205ENST00000404113 LRRIQ1Q96JM4 1722 aa14.69□□□□□ -0.06
LPIN1-205ENST00000404113 APLP2Q06481 763 aa14.68□□□□□ -0.06
LPIN1-205ENST00000404113 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
LPIN1-205ENST00000404113 CTTNBP2Q8WZ74 1663 aa14.67□□□□□ -0.06
LPIN1-205ENST00000404113 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms