RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
TRIO-209ENST00000507714 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
TRIO-209ENST00000507714 ABCC9O60706 1549 aa18.13■□□□□ 0.49
TRIO-209ENST00000507714 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
TRIO-209ENST00000507714 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
TRIO-209ENST00000507714 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
TRIO-209ENST00000507714 NACADO15069 1562 aa17.48■□□□□ 0.39
TRIO-209ENST00000507714 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
TRIO-209ENST00000507714 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
TRIO-209ENST00000507714 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
TRIO-209ENST00000507714 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
TRIO-209ENST00000507714 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRIO-209ENST00000507714 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
TRIO-209ENST00000507714 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
TRIO-209ENST00000507714 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
TRIO-209ENST00000507714 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
TRIO-209ENST00000507714 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
TRIO-209ENST00000507714 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
TRIO-209ENST00000507714 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
TRIO-209ENST00000507714 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
TRIO-209ENST00000507714 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
TRIO-209ENST00000507714 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
TRIO-209ENST00000507714 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
TRIO-209ENST00000507714 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
TRIO-209ENST00000507714 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
TRIO-209ENST00000507714 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
TRIO-209ENST00000507714 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
TRIO-209ENST00000507714 WIZO95785 1651 aa16.04■□□□□ 0.16
TRIO-209ENST00000507714 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
TRIO-209ENST00000507714 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
TRIO-209ENST00000507714 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
TRIO-209ENST00000507714 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
TRIO-209ENST00000507714 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.1
TRIO-209ENST00000507714 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
TRIO-209ENST00000507714 NESP48681 1621 aa15.65■□□□□ 0.1
TRIO-209ENST00000507714 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
TRIO-209ENST00000507714 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
TRIO-209ENST00000507714 CFTRP13569 1480 aa15.53■□□□□ 0.08
TRIO-209ENST00000507714 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
TRIO-209ENST00000507714 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
TRIO-209ENST00000507714 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
TRIO-209ENST00000507714 CUX2O14529 1486 aa15.48■□□□□ 0.07
TRIO-209ENST00000507714 FANCD2Q9BXW9 1451 aa15.47■□□□□ 0.07
TRIO-209ENST00000507714 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
TRIO-209ENST00000507714 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
TRIO-209ENST00000507714 WDR62O43379 1518 aa15.33■□□□□ 0.04
TRIO-209ENST00000507714 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
TRIO-209ENST00000507714 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
TRIO-209ENST00000507714 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
TRIO-209ENST00000507714 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
TRIO-209ENST00000507714 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
TRIO-209ENST00000507714 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
TRIO-209ENST00000507714 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
TRIO-209ENST00000507714 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
TRIO-209ENST00000507714 CUX1P39880 1505 aa15.16■□□□□ 0.02
TRIO-209ENST00000507714 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
TRIO-209ENST00000507714 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
TRIO-209ENST00000507714 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
TRIO-209ENST00000507714 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
TRIO-209ENST00000507714 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
TRIO-209ENST00000507714 SOGA1O94964 1423 aa15.06■□□□□ 0
TRIO-209ENST00000507714 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
TRIO-209ENST00000507714 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
TRIO-209ENST00000507714 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
TRIO-209ENST00000507714 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
TRIO-209ENST00000507714 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
TRIO-209ENST00000507714 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
TRIO-209ENST00000507714 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
TRIO-209ENST00000507714 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIO-209ENST00000507714 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
TRIO-209ENST00000507714 DNAJC5Q9H3Z4 198 aa14.91□□□□□ -0.02
TRIO-209ENST00000507714 EEA1Q15075 1411 aa14.91□□□□□ -0.02
TRIO-209ENST00000507714 FBLN2P98095 1184 aa14.89□□□□□ -0.03
TRIO-209ENST00000507714 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
TRIO-209ENST00000507714 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
TRIO-209ENST00000507714 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
TRIO-209ENST00000507714 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
TRIO-209ENST00000507714 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
TRIO-209ENST00000507714 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
TRIO-209ENST00000507714 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
TRIO-209ENST00000507714 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.03
TRIO-209ENST00000507714 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
TRIO-209ENST00000507714 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
TRIO-209ENST00000507714 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
TRIO-209ENST00000507714 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
TRIO-209ENST00000507714 CHD1O14646 1710 aa14.79□□□□□ -0.04
TRIO-209ENST00000507714 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
TRIO-209ENST00000507714 IGF1RP08069 1367 aa14.77□□□□□ -0.04
TRIO-209ENST00000507714 CUL7Q14999 1698 aa14.76□□□□□ -0.05
TRIO-209ENST00000507714 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
TRIO-209ENST00000507714 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
TRIO-209ENST00000507714 ADAMTS12P58397 1594 aa14.7□□□□□ -0.06
TRIO-209ENST00000507714 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
TRIO-209ENST00000507714 GRIN2AQ12879 1464 aa14.67□□□□□ -0.06
TRIO-209ENST00000507714 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
TRIO-209ENST00000507714 KIF21BO75037 1637 aa14.66□□□□□ -0.06
TRIO-209ENST00000507714 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
TRIO-209ENST00000507714 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
TRIO-209ENST00000507714 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
TRIO-209ENST00000507714 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms