RNA–Protein interactions for RNA: ENST00000490300.1

CCDC22-202, Transcript of coiled-coil domain containing 22, humanhuman

TSL 3

Gene CCDC22, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-202ENST00000490300 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
CCDC22-202ENST00000490300 CCDC180Q9P1Z9 1646 aa28.96■■■□□ 2.23
CCDC22-202ENST00000490300 ABCC9O60706 1549 aa28.85■■■□□ 2.21
CCDC22-202ENST00000490300 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
CCDC22-202ENST00000490300 NACADO15069 1562 aa27.3■■□□□ 1.96
CCDC22-202ENST00000490300 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
CCDC22-202ENST00000490300 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
CCDC22-202ENST00000490300 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
CCDC22-202ENST00000490300 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
CCDC22-202ENST00000490300 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
CCDC22-202ENST00000490300 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
CCDC22-202ENST00000490300 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
CCDC22-202ENST00000490300 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
CCDC22-202ENST00000490300 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
CCDC22-202ENST00000490300 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
CCDC22-202ENST00000490300 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
CCDC22-202ENST00000490300 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
CCDC22-202ENST00000490300 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
CCDC22-202ENST00000490300 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
CCDC22-202ENST00000490300 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
CCDC22-202ENST00000490300 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
CCDC22-202ENST00000490300 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
CCDC22-202ENST00000490300 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
CCDC22-202ENST00000490300 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
CCDC22-202ENST00000490300 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
CCDC22-202ENST00000490300 CUX2O14529 1486 aa24.87■■□□□ 1.57
CCDC22-202ENST00000490300 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
CCDC22-202ENST00000490300 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
CCDC22-202ENST00000490300 NESP48681 1621 aa24.84■■□□□ 1.57
CCDC22-202ENST00000490300 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
CCDC22-202ENST00000490300 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
CCDC22-202ENST00000490300 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
CCDC22-202ENST00000490300 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
CCDC22-202ENST00000490300 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
CCDC22-202ENST00000490300 WIZO95785 1651 aa24.56■■□□□ 1.52
CCDC22-202ENST00000490300 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
CCDC22-202ENST00000490300 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
CCDC22-202ENST00000490300 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
CCDC22-202ENST00000490300 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
CCDC22-202ENST00000490300 WDR62O43379 1518 aa24.27■■□□□ 1.48
CCDC22-202ENST00000490300 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
CCDC22-202ENST00000490300 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
CCDC22-202ENST00000490300 CFTRP13569 1480 aa24.15■■□□□ 1.46
CCDC22-202ENST00000490300 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
CCDC22-202ENST00000490300 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
CCDC22-202ENST00000490300 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
CCDC22-202ENST00000490300 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
CCDC22-202ENST00000490300 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
CCDC22-202ENST00000490300 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
CCDC22-202ENST00000490300 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
CCDC22-202ENST00000490300 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
CCDC22-202ENST00000490300 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
CCDC22-202ENST00000490300 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
CCDC22-202ENST00000490300 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
CCDC22-202ENST00000490300 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
CCDC22-202ENST00000490300 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
CCDC22-202ENST00000490300 RIMBP3CA6NJZ7 1639 aa23.49■■□□□ 1.35
CCDC22-202ENST00000490300 RIMBP3BA6NNM3 1639 aa23.49■■□□□ 1.35
CCDC22-202ENST00000490300 RIMBP3Q9UFD9 1639 aa23.49■■□□□ 1.35
CCDC22-202ENST00000490300 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
CCDC22-202ENST00000490300 CHD1O14646 1710 aa23.45■■□□□ 1.34
CCDC22-202ENST00000490300 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.346e-8■□□□□ 10.7
CCDC22-202ENST00000490300 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CCDC22-202ENST00000490300 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
CCDC22-202ENST00000490300 CUX1P39880 1505 aa23.33■■□□□ 1.33
CCDC22-202ENST00000490300 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
CCDC22-202ENST00000490300 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
CCDC22-202ENST00000490300 SOGA1O94964 1423 aa23.26■■□□□ 1.31
CCDC22-202ENST00000490300 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
CCDC22-202ENST00000490300 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
CCDC22-202ENST00000490300 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
CCDC22-202ENST00000490300 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
CCDC22-202ENST00000490300 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
CCDC22-202ENST00000490300 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
CCDC22-202ENST00000490300 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
CCDC22-202ENST00000490300 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
CCDC22-202ENST00000490300 FBLN2P98095 1184 aa23.09■■□□□ 1.29
CCDC22-202ENST00000490300 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
CCDC22-202ENST00000490300 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
CCDC22-202ENST00000490300 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
CCDC22-202ENST00000490300 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
CCDC22-202ENST00000490300 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
CCDC22-202ENST00000490300 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
CCDC22-202ENST00000490300 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
CCDC22-202ENST00000490300 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
CCDC22-202ENST00000490300 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
CCDC22-202ENST00000490300 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
CCDC22-202ENST00000490300 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
CCDC22-202ENST00000490300 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
CCDC22-202ENST00000490300 CEP170Q5SW79 1584 aa22.83■■□□□ 1.25
CCDC22-202ENST00000490300 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
CCDC22-202ENST00000490300 NUP160Q12769 1436 aa22.79■■□□□ 1.24
CCDC22-202ENST00000490300 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
CCDC22-202ENST00000490300 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
CCDC22-202ENST00000490300 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
CCDC22-202ENST00000490300 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
CCDC22-202ENST00000490300 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
CCDC22-202ENST00000490300 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
CCDC22-202ENST00000490300 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
CCDC22-202ENST00000490300 CUL7Q14999 1698 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms