RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
TGFBR3-203ENST00000417833 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
TGFBR3-203ENST00000417833 ABCC9O60706 1549 aa28.24■■■□□ 2.11
TGFBR3-203ENST00000417833 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
TGFBR3-203ENST00000417833 NACADO15069 1562 aa26.86■■□□□ 1.89
TGFBR3-203ENST00000417833 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
TGFBR3-203ENST00000417833 MYO15BQ96JP2 1530 aa26.76■■□□□ 1.87
TGFBR3-203ENST00000417833 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
TGFBR3-203ENST00000417833 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
TGFBR3-203ENST00000417833 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
TGFBR3-203ENST00000417833 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
TGFBR3-203ENST00000417833 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
TGFBR3-203ENST00000417833 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
TGFBR3-203ENST00000417833 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
TGFBR3-203ENST00000417833 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
TGFBR3-203ENST00000417833 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
TGFBR3-203ENST00000417833 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
TGFBR3-203ENST00000417833 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
TGFBR3-203ENST00000417833 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
TGFBR3-203ENST00000417833 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
TGFBR3-203ENST00000417833 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
TGFBR3-203ENST00000417833 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
TGFBR3-203ENST00000417833 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
TGFBR3-203ENST00000417833 CUX2O14529 1486 aa24.76■■□□□ 1.55
TGFBR3-203ENST00000417833 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
TGFBR3-203ENST00000417833 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
TGFBR3-203ENST00000417833 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
TGFBR3-203ENST00000417833 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
TGFBR3-203ENST00000417833 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
TGFBR3-203ENST00000417833 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
TGFBR3-203ENST00000417833 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
TGFBR3-203ENST00000417833 WIZO95785 1651 aa24.45■■□□□ 1.5
TGFBR3-203ENST00000417833 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
TGFBR3-203ENST00000417833 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
TGFBR3-203ENST00000417833 NESP48681 1621 aa24.1■■□□□ 1.45
TGFBR3-203ENST00000417833 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
TGFBR3-203ENST00000417833 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
TGFBR3-203ENST00000417833 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
TGFBR3-203ENST00000417833 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
TGFBR3-203ENST00000417833 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
TGFBR3-203ENST00000417833 CFTRP13569 1480 aa23.92■■□□□ 1.42
TGFBR3-203ENST00000417833 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.4
TGFBR3-203ENST00000417833 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
TGFBR3-203ENST00000417833 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
TGFBR3-203ENST00000417833 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
TGFBR3-203ENST00000417833 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
TGFBR3-203ENST00000417833 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
TGFBR3-203ENST00000417833 WDR62O43379 1518 aa23.6■■□□□ 1.37
TGFBR3-203ENST00000417833 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
TGFBR3-203ENST00000417833 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
TGFBR3-203ENST00000417833 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
TGFBR3-203ENST00000417833 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
TGFBR3-203ENST00000417833 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
TGFBR3-203ENST00000417833 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
TGFBR3-203ENST00000417833 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
TGFBR3-203ENST00000417833 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
TGFBR3-203ENST00000417833 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
TGFBR3-203ENST00000417833 CUX1P39880 1505 aa23.19■■□□□ 1.3
TGFBR3-203ENST00000417833 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
TGFBR3-203ENST00000417833 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
TGFBR3-203ENST00000417833 FGD5Q6ZNL6 1462 aa23.1■■□□□ 1.29
TGFBR3-203ENST00000417833 SOGA1O94964 1423 aa23.08■■□□□ 1.29
TGFBR3-203ENST00000417833 ARHGEF11O15085 1522 aa23.08■■□□□ 1.28
TGFBR3-203ENST00000417833 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
TGFBR3-203ENST00000417833 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
TGFBR3-203ENST00000417833 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
TGFBR3-203ENST00000417833 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
TGFBR3-203ENST00000417833 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
TGFBR3-203ENST00000417833 WDR97A6NE52 1622 aa23■■□□□ 1.27
TGFBR3-203ENST00000417833 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
TGFBR3-203ENST00000417833 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
TGFBR3-203ENST00000417833 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.273e-12■■■■■ 47.9
TGFBR3-203ENST00000417833 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
TGFBR3-203ENST00000417833 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
TGFBR3-203ENST00000417833 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
TGFBR3-203ENST00000417833 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
TGFBR3-203ENST00000417833 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
TGFBR3-203ENST00000417833 GRIN2BQ13224 1484 aa22.81■■□□□ 1.24
TGFBR3-203ENST00000417833 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
TGFBR3-203ENST00000417833 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
TGFBR3-203ENST00000417833 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
TGFBR3-203ENST00000417833 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
TGFBR3-203ENST00000417833 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
TGFBR3-203ENST00000417833 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
TGFBR3-203ENST00000417833 CHD1O14646 1710 aa22.7■■□□□ 1.22
TGFBR3-203ENST00000417833 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
TGFBR3-203ENST00000417833 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
TGFBR3-203ENST00000417833 FBLN2P98095 1184 aa22.64■■□□□ 1.21
TGFBR3-203ENST00000417833 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
TGFBR3-203ENST00000417833 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
TGFBR3-203ENST00000417833 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
TGFBR3-203ENST00000417833 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
TGFBR3-203ENST00000417833 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
TGFBR3-203ENST00000417833 IGF1RP08069 1367 aa22.5■■□□□ 1.19
TGFBR3-203ENST00000417833 CLASP1Q7Z460 1538 aa22.48■■□□□ 1.19
TGFBR3-203ENST00000417833 CUL7Q14999 1698 aa22.44■■□□□ 1.18
TGFBR3-203ENST00000417833 NUP160Q12769 1436 aa22.43■■□□□ 1.18
TGFBR3-203ENST00000417833 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
TGFBR3-203ENST00000417833 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
TGFBR3-203ENST00000417833 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms