RNA–Protein interactions for RNA: ENST00000559659.1

NUSAP1-209, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 2

Gene NUSAP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-209ENST00000559659 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
NUSAP1-209ENST00000559659 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
NUSAP1-209ENST00000559659 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
NUSAP1-209ENST00000559659 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
NUSAP1-209ENST00000559659 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
NUSAP1-209ENST00000559659 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
NUSAP1-209ENST00000559659 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
NUSAP1-209ENST00000559659 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
NUSAP1-209ENST00000559659 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
NUSAP1-209ENST00000559659 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
NUSAP1-209ENST00000559659 ABCC9O60706 1549 aa15.13■□□□□ 0.01
NUSAP1-209ENST00000559659 NACADO15069 1562 aa15.06■□□□□ 0
NUSAP1-209ENST00000559659 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
NUSAP1-209ENST00000559659 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
NUSAP1-209ENST00000559659 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
NUSAP1-209ENST00000559659 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
NUSAP1-209ENST00000559659 FOXD1Q16676 465 aa14.7□□□□□ -0.06
NUSAP1-209ENST00000559659 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
NUSAP1-209ENST00000559659 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
NUSAP1-209ENST00000559659 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
NUSAP1-209ENST00000559659 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
NUSAP1-209ENST00000559659 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
NUSAP1-209ENST00000559659 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
NUSAP1-209ENST00000559659 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
NUSAP1-209ENST00000559659 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
NUSAP1-209ENST00000559659 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUSAP1-209ENST00000559659 WIZO95785 1651 aa14.11□□□□□ -0.15
NUSAP1-209ENST00000559659 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
NUSAP1-209ENST00000559659 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
NUSAP1-209ENST00000559659 MSH5O43196 834 aa14.03□□□□□ -0.16
NUSAP1-209ENST00000559659 SMARCA2P51531 1590 aa14.02□□□□□ -0.16
NUSAP1-209ENST00000559659 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
NUSAP1-209ENST00000559659 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
NUSAP1-209ENST00000559659 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
NUSAP1-209ENST00000559659 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
NUSAP1-209ENST00000559659 NCAPD3P42695 1498 aa13.81□□□□□ -0.2
NUSAP1-209ENST00000559659 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
NUSAP1-209ENST00000559659 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
NUSAP1-209ENST00000559659 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
NUSAP1-209ENST00000559659 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
NUSAP1-209ENST00000559659 CFTRP13569 1480 aa13.52□□□□□ -0.25
NUSAP1-209ENST00000559659 ABCC8Q09428 1581 aa13.51□□□□□ -0.25
NUSAP1-209ENST00000559659 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
NUSAP1-209ENST00000559659 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
NUSAP1-209ENST00000559659 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
NUSAP1-209ENST00000559659 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
NUSAP1-209ENST00000559659 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
NUSAP1-209ENST00000559659 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
NUSAP1-209ENST00000559659 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
NUSAP1-209ENST00000559659 EEA1Q15075 1411 aa13.36□□□□□ -0.27
NUSAP1-209ENST00000559659 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
NUSAP1-209ENST00000559659 CUX1P39880 1505 aa13.31□□□□□ -0.28
NUSAP1-209ENST00000559659 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
NUSAP1-209ENST00000559659 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
NUSAP1-209ENST00000559659 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
NUSAP1-209ENST00000559659 NESP48681 1621 aa13.27□□□□□ -0.29
NUSAP1-209ENST00000559659 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
NUSAP1-209ENST00000559659 SOGA1O94964 1423 aa13.2□□□□□ -0.3
NUSAP1-209ENST00000559659 KIF21BO75037 1637 aa13.19□□□□□ -0.3
NUSAP1-209ENST00000559659 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
NUSAP1-209ENST00000559659 FAM9AQ8IZU1 332 aaPredicted RBP13.18□□□□□ -0.3
NUSAP1-209ENST00000559659 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
NUSAP1-209ENST00000559659 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
NUSAP1-209ENST00000559659 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
NUSAP1-209ENST00000559659 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
NUSAP1-209ENST00000559659 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
NUSAP1-209ENST00000559659 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
NUSAP1-209ENST00000559659 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
NUSAP1-209ENST00000559659 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
NUSAP1-209ENST00000559659 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
NUSAP1-209ENST00000559659 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
NUSAP1-209ENST00000559659 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
NUSAP1-209ENST00000559659 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
NUSAP1-209ENST00000559659 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
NUSAP1-209ENST00000559659 LOC105371045A0A1W2PR82 267 aa13.09□□□□□ -0.31
NUSAP1-209ENST00000559659 CUX2O14529 1486 aa13.08□□□□□ -0.32
NUSAP1-209ENST00000559659 WDR62O43379 1518 aa13.07□□□□□ -0.32
NUSAP1-209ENST00000559659 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
NUSAP1-209ENST00000559659 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
NUSAP1-209ENST00000559659 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
NUSAP1-209ENST00000559659 CUL7Q14999 1698 aa13.03□□□□□ -0.32
NUSAP1-209ENST00000559659 ADRA2BP18089 450 aa13.03□□□□□ -0.32
NUSAP1-209ENST00000559659 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
NUSAP1-209ENST00000559659 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
NUSAP1-209ENST00000559659 TARBP1Q13395 1621 aaKnown RBP13□□□□□ -0.33
NUSAP1-209ENST00000559659 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
NUSAP1-209ENST00000559659 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
NUSAP1-209ENST00000559659 CEP162Q5TB80 1403 aa12.97□□□□□ -0.33
NUSAP1-209ENST00000559659 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
NUSAP1-209ENST00000559659 PBRM1Q86U86 1689 aa12.96□□□□□ -0.34
NUSAP1-209ENST00000559659 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
NUSAP1-209ENST00000559659 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
NUSAP1-209ENST00000559659 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
NUSAP1-209ENST00000559659 IGF1RP08069 1367 aa12.92□□□□□ -0.34
NUSAP1-209ENST00000559659 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
NUSAP1-209ENST00000559659 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
NUSAP1-209ENST00000559659 CLIP1P30622 1438 aa12.88□□□□□ -0.35
NUSAP1-209ENST00000559659 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
NUSAP1-209ENST00000559659 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
NUSAP1-209ENST00000559659 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms