RNA–Protein interactions for RNA: ENST00000490322.1

SMYD3-215, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-215ENST00000490322 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
SMYD3-215ENST00000490322 CHIC1Q5VXU3 224 aa12.12□□□□□ -0.47
SMYD3-215ENST00000490322 SENP3Q9H4L4 574 aaPredicted RBP11.15□□□□□ -0.62
SMYD3-215ENST00000490322 PHF23Q9BUL5 403 aaPredicted RBP10.93□□□□□ -0.66
SMYD3-215ENST00000490322 FOXD1Q16676 465 aa10.44□□□□□ -0.74
SMYD3-215ENST00000490322 POTEDQ86YR6 584 aa10.4□□□□□ -0.74
SMYD3-215ENST00000490322 MSH5O43196 834 aa9.92□□□□□ -0.82
SMYD3-215ENST00000490322 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
SMYD3-215ENST00000490322 PPP6R1Q9UPN7 881 aa9.46□□□□□ -0.9
SMYD3-215ENST00000490322 ADRA2BP18089 450 aa9.41□□□□□ -0.9
SMYD3-215ENST00000490322 PLPPR3Q6T4P5 718 aa9.34□□□□□ -0.91
SMYD3-215ENST00000490322 DMRT2Q9Y5R5 561 aa8.78□□□□□ -1
SMYD3-215ENST00000490322 CACNB1Q02641 598 aaPredicted RBP8.77□□□□□ -1.01
SMYD3-215ENST00000490322 MAPK8IP2Q13387 824 aaPredicted RBP8.76□□□□□ -1.01
SMYD3-215ENST00000490322 SCAF1Q9H7N4 1312 aaKnown RBP8.56□□□□□ -1.04
SMYD3-215ENST00000490322 DCAF8L1A6NGE4 600 aa8.46□□□□□ -1.06
SMYD3-215ENST00000490322 RNF39Q9H2S5 420 aa8.45□□□□□ -1.06
SMYD3-215ENST00000490322 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
SMYD3-215ENST00000490322 C1QBPQ07021 282 aaKnown RBP8.27□□□□□ -1.09
SMYD3-215ENST00000490322 PPP4R3CPQ6ZMV5 832 aa8.14□□□□□ -1.11
SMYD3-215ENST00000490322 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
SMYD3-215ENST00000490322 POTEHQ6S545 545 aa8.07□□□□□ -1.12
SMYD3-215ENST00000490322 CNKSR2Q8WXI2 1034 aa8.07□□□□□ -1.12
SMYD3-215ENST00000490322 DNAJC5BQ9UF47 199 aa8.05□□□□□ -1.12
SMYD3-215ENST00000490322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMYD3-215ENST00000490322 DSG3P32926 999 aa7.76□□□□□ -1.17
SMYD3-215ENST00000490322 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
SMYD3-215ENST00000490322 CAPN15O75808 1086 aa7.71□□□□□ -1.18
SMYD3-215ENST00000490322 U3KPZ7 1027 aaPredicted RBP7.7□□□□□ -1.18
SMYD3-215ENST00000490322 NCBP3Q53F19 620 aaKnown RBP7.69□□□□□ -1.18
SMYD3-215ENST00000490322 NPM3O75607 178 aaKnown RBP7.6□□□□□ -1.19
SMYD3-215ENST00000490322 ABCB7O75027 752 aa7.52□□□□□ -1.21
SMYD3-215ENST00000490322 TRHP20396 242 aaPredicted RBP7.49□□□□□ -1.21
SMYD3-215ENST00000490322 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
SMYD3-215ENST00000490322 CHRDL2Q6WN34 429 aa7.43□□□□□ -1.22
SMYD3-215ENST00000490322 APLP2Q06481 763 aa7.41□□□□□ -1.22
SMYD3-215ENST00000490322 RBM42Q9BTD8 480 aaKnown RBP7.41□□□□□ -1.22
SMYD3-215ENST00000490322 SP7Q8TDD2 431 aaPredicted RBP7.38□□□□□ -1.23
SMYD3-215ENST00000490322 SLC4A2P04920 1241 aa7.37□□□□□ -1.23
SMYD3-215ENST00000490322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
SMYD3-215ENST00000490322 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
SMYD3-215ENST00000490322 SAMD1Q6SPF0 538 aaPredicted RBP7.26□□□□□ -1.25
SMYD3-215ENST00000490322 POLA2Q14181 598 aa7.19□□□□□ -1.26
SMYD3-215ENST00000490322 PIP4P2Q8N4L2 257 aa7.17□□□□□ -1.26
SMYD3-215ENST00000490322 AKT1S1Q96B36 256 aa7.15□□□□□ -1.26
SMYD3-215ENST00000490322 HAX1O00165 279 aa7.13□□□□□ -1.27
SMYD3-215ENST00000490322 KCNA4P22459 653 aa7.1□□□□□ -1.27
SMYD3-215ENST00000490322 REM2Q8IYK8 340 aaPredicted RBP7.09□□□□□ -1.27
SMYD3-215ENST00000490322 PITPNM1O00562 1244 aa7.04□□□□□ -1.28
SMYD3-215ENST00000490322 MYCNP04198 464 aaPredicted RBP7.03□□□□□ -1.28
SMYD3-215ENST00000490322 FXR2P51116 673 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMYD3-215ENST00000490322 EVX2Q03828 476 aa7.03□□□□□ -1.28
SMYD3-215ENST00000490322 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
SMYD3-215ENST00000490322 ZBTB12Q9Y330 459 aaPredicted RBP7.01□□□□□ -1.29
SMYD3-215ENST00000490322 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
SMYD3-215ENST00000490322 LHX8Q68G74 356 aa6.9□□□□□ -1.3
SMYD3-215ENST00000490322 EHMT2Q96KQ7 1210 aa6.87□□□□□ -1.31
SMYD3-215ENST00000490322 PRKAR2AP13861 404 aaKnown RBP6.84□□□□□ -1.31
SMYD3-215ENST00000490322 C19orf67A6NJJ6 358 aa6.83□□□□□ -1.32
SMYD3-215ENST00000490322 GABBR2O75899 941 aa6.83□□□□□ -1.32
SMYD3-215ENST00000490322 PLSCR2Q9NRY7 297 aa6.83□□□□□ -1.32
SMYD3-215ENST00000490322 CLEC11AQ9Y240 323 aa6.76□□□□□ -1.33
SMYD3-215ENST00000490322 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
SMYD3-215ENST00000490322 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
SMYD3-215ENST00000490322 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
SMYD3-215ENST00000490322 SPDYE1Q8NFV5 336 aaPredicted RBP6.74□□□□□ -1.33
SMYD3-215ENST00000490322 FOXD4L1Q9NU39 408 aa6.74□□□□□ -1.33
SMYD3-215ENST00000490322 POTEIP0CG38 1075 aa6.69□□□□□ -1.34
SMYD3-215ENST00000490322 CHADLQ6NUI6 762 aa6.69□□□□□ -1.34
SMYD3-215ENST00000490322 FBLN2P98095 1184 aa6.65□□□□□ -1.34
SMYD3-215ENST00000490322 SSUH2Q9Y2M2 353 aa6.64□□□□□ -1.35
SMYD3-215ENST00000490322 SLC4A1APQ9BWU0 796 aaKnown RBP6.63□□□□□ -1.35
SMYD3-215ENST00000490322 CD44P16070 742 aaKnown RBP6.61□□□□□ -1.35
SMYD3-215ENST00000490322 ZNF692Q9BU19 519 aaPredicted RBP6.61□□□□□ -1.35
SMYD3-215ENST00000490322 MKRN4PQ13434 485 aaPredicted RBP6.58□□□□□ -1.36
SMYD3-215ENST00000490322 PRR29P0C7W0 189 aa6.57□□□□□ -1.36
SMYD3-215ENST00000490322 ATXN8OSP0DMR3 200 aa6.56□□□□□ -1.36
SMYD3-215ENST00000490322 CSRNP3Q8WYN3 585 aa6.56□□□□□ -1.36
SMYD3-215ENST00000490322 DCBLD2Q96PD2 775 aa6.56□□□□□ -1.36
SMYD3-215ENST00000490322 ZBTB22O15209 634 aa6.55□□□□□ -1.36
SMYD3-215ENST00000490322 POTEMA6NI47 508 aa6.53□□□□□ -1.36
SMYD3-215ENST00000490322 CLCN6P51797 869 aa6.53□□□□□ -1.36
SMYD3-215ENST00000490322 FARP1Q9Y4F1 1045 aaPredicted RBP6.53□□□□□ -1.36
SMYD3-215ENST00000490322 OTUD5Q96G74 571 aa6.52□□□□□ -1.37
SMYD3-215ENST00000490322 PABPN1Q86U42 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMYD3-215ENST00000490322 POTEGQ6S5H5 508 aa6.5□□□□□ -1.37
SMYD3-215ENST00000490322 ZNF579Q8NAF0 562 aaKnown RBP6.48□□□□□ -1.37
SMYD3-215ENST00000490322 POTEB2H3BUK9 544 aa6.46□□□□□ -1.38
SMYD3-215ENST00000490322 GALR2O43603 387 aaPredicted RBP6.44□□□□□ -1.38
SMYD3-215ENST00000490322 ZRANB1Q9UGI0 708 aa6.44□□□□□ -1.38
SMYD3-215ENST00000490322 PCDH10Q9P2E7 1040 aa6.4□□□□□ -1.38
SMYD3-215ENST00000490322 PELP1Q8IZL8 1130 aaKnown RBP6.35□□□□□ -1.39
SMYD3-215ENST00000490322 PHF12Q96QT6 1004 aa6.35□□□□□ -1.39
SMYD3-215ENST00000490322 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
SMYD3-215ENST00000490322 CREBZFQ9NS37 354 aa6.33□□□□□ -1.4
SMYD3-215ENST00000490322 POTEJP0CG39 1038 aa6.32□□□□□ -1.4
SMYD3-215ENST00000490322 METRNQ9UJH8 293 aa6.31□□□□□ -1.4
SMYD3-215ENST00000490322 PAK3O75914 559 aaPredicted RBP6.29□□□□□ -1.4
SMYD3-215ENST00000490322 MAMSTRQ6ZN01 415 aa6.27□□□□□ -1.41
SMYD3-215ENST00000490322 FAM163AQ96GL9 167 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms