Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.164e-6■■■□□ 15.9
LARP4Q71RC2 CDC37-209ENST00000591248 1377 ntTSL 514.06□□□□□ -0.165e-7■■■□□ 15.9
LARP4Q71RC2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.584e-10■■■□□ 15.9
LARP4Q71RC2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.495e-10■■■□□ 15.8
LARP4Q71RC2 APMAP-202ENST00000451442 2117 ntTSL 513.22□□□□□ -0.295e-10■■■□□ 15.8
LARP4Q71RC2 ARHGDIA-210ENST00000582520 245 ntTSL 38.34□□□□□ -1.073e-7■■■□□ 15.8
LARP4Q71RC2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.98■□□□□ 0.951e-6■■■□□ 15.8
LARP4Q71RC2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■■□□ 15.8
LARP4Q71RC2 LSM4-206ENST00000600289 1113 ntTSL 214.84□□□□□ -0.031e-6■■■□□ 15.8
LARP4Q71RC2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.23■■■□□ 2.115e-11■■■□□ 15.8
LARP4Q71RC2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.045e-11■■■□□ 15.8
LARP4Q71RC2 CDIPT-203ENST00000562041 1129 ntTSL 322.1■■□□□ 1.139e-8■■■□□ 15.8
LARP4Q71RC2 MGAT4B-205ENST00000518778 1568 ntTSL 1 (best)20.82■□□□□ 0.929e-8■■■□□ 15.8
LARP4Q71RC2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.879e-8■■■□□ 15.8
LARP4Q71RC2 MGAT4B-216ENST00000520969 1096 ntTSL 320.23■□□□□ 0.839e-8■■■□□ 15.8
LARP4Q71RC2 KLHDC2-207ENST00000555443 1756 ntTSL 220.08■□□□□ 0.819e-8■■■□□ 15.8
LARP4Q71RC2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.769e-8■■■□□ 15.8
LARP4Q71RC2 KLHDC2-208ENST00000555739 1696 ntTSL 519.47■□□□□ 0.719e-8■■■□□ 15.8
LARP4Q71RC2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.659e-8■■■□□ 15.8
LARP4Q71RC2 MGAT4B-209ENST00000519836 1686 ntTSL 1 (best)19.1■□□□□ 0.659e-8■■■□□ 15.8
LARP4Q71RC2 CDIPT-206ENST00000564296 1015 ntTSL 218.49■□□□□ 0.559e-8■■■□□ 15.8
LARP4Q71RC2 DHX38-202ENST00000562774 500 ntTSL 418.47■□□□□ 0.559e-8■■■□□ 15.8
LARP4Q71RC2 HNRNPM-208ENST00000597270 1147 ntTSL 218.42■□□□□ 0.549e-8■■■□□ 15.8
LARP4Q71RC2 COPE-204ENST00000593827 601 ntTSL 318.37■□□□□ 0.539e-8■■■□□ 15.8
LARP4Q71RC2 DHX38-214ENST00000579387 2258 ntTSL 517.54■□□□□ 0.49e-8■■■□□ 15.8
LARP4Q71RC2 HNRNPM-204ENST00000594907 1078 ntTSL 517.4■□□□□ 0.389e-8■■■□□ 15.8
LARP4Q71RC2 HNRNPM-213ENST00000600092 1086 ntTSL 216.98■□□□□ 0.319e-8■■■□□ 15.8
LARP4Q71RC2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.279e-8■■■□□ 15.8
LARP4Q71RC2 DHX38-210ENST00000567142 892 ntTSL 216.65■□□□□ 0.269e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.179e-8■■■□□ 15.8
LARP4Q71RC2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.94■□□□□ 0.149e-8■■■□□ 15.8
LARP4Q71RC2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.119e-8■■■□□ 15.8
LARP4Q71RC2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.6■□□□□ 0.099e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-203ENST00000460341 565 ntTSL 415.43■□□□□ 0.069e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-214ENST00000480194 455 ntTSL 514.94□□□□□ -0.029e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.029e-8■■■□□ 15.8
LARP4Q71RC2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.139e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.91□□□□□ -0.189e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.91□□□□□ -0.189e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)13.74□□□□□ -0.219e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-216ENST00000486421 505 ntTSL 513.61□□□□□ -0.239e-8■■■□□ 15.8
LARP4Q71RC2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.239e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.259e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-209ENST00000473166 752 ntTSL 313.43□□□□□ -0.269e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.329e-8■■■□□ 15.8
LARP4Q71RC2 ACY1-219ENST00000637102 1488 ntTSL 312.82□□□□□ -0.369e-8■■■□□ 15.8
LARP4Q71RC2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.429e-8■■■□□ 15.8
LARP4Q71RC2 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.439e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.33□□□□□ -0.449e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-218ENST00000491103 871 ntTSL 512.21□□□□□ -0.459e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.16□□□□□ -0.469e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC12.05□□□□□ -0.489e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-211ENST00000473807 559 ntTSL 411.45□□□□□ -0.589e-8■■■□□ 15.8
LARP4Q71RC2 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC11.36□□□□□ -0.599e-8■■■□□ 15.8
LARP4Q71RC2 CHKA-203ENST00000525155 1201 ntTSL 511.33□□□□□ -0.69e-8■■■□□ 15.8
LARP4Q71RC2 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC11.3□□□□□ -0.69e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-213ENST00000478732 344 ntTSL 511.16□□□□□ -0.629e-8■■■□□ 15.8
LARP4Q71RC2 IST1-205ENST00000439924 1841 ntTSL 510.92□□□□□ -0.669e-8■■■□□ 15.8
LARP4Q71RC2 IST1-206ENST00000456820 2031 ntTSL 510.34□□□□□ -0.759e-8■■■□□ 15.8
LARP4Q71RC2 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC10.11□□□□□ -0.799e-8■■■□□ 15.8
LARP4Q71RC2 TMEM109-203ENST00000540280 724 ntTSL 39.91□□□□□ -0.822e-14■■■□□ 15.8
LARP4Q71RC2 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.849e-8■■■□□ 15.8
LARP4Q71RC2 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.875e-11■■■□□ 15.8
LARP4Q71RC2 TMEM14B-205ENST00000463100 502 ntTSL 49.6□□□□□ -0.879e-8■■■□□ 15.8
LARP4Q71RC2 CHKA-207ENST00000533728 662 ntTSL 29.58□□□□□ -0.889e-8■■■□□ 15.8
LARP4Q71RC2 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.96□□□□□ -0.989e-8■■■□□ 15.8
LARP4Q71RC2 HNRNPM-210ENST00000598367 298 ntTSL 58.61□□□□□ -1.039e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-208ENST00000469123 662 ntTSL 57.93□□□□□ -1.149e-8■■■□□ 15.8
LARP4Q71RC2 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.8□□□□□ -1.169e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.459e-8■■■□□ 15.8
LARP4Q71RC2 TMEM14B-207ENST00000467229 483 ntTSL 35.7□□□□□ -1.59e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-204ENST00000465167 517 ntTSL 55.69□□□□□ -1.59e-8■■■□□ 15.8
LARP4Q71RC2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.559e-8■■■□□ 15.8
LARP4Q71RC2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.559e-8■■■□□ 15.8
LARP4Q71RC2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.592e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.332e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.69■□□□□ 0.262e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.252e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.1■□□□□ 0.172e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.012e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.042e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.5□□□□□ -0.092e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.342e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.63□□□□□ -0.392e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.482e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.74□□□□□ -0.532e-6■■■□□ 15.8
LARP4Q71RC2 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC11.37□□□□□ -0.592e-6■■■□□ 15.8
LARP4Q71RC2 NDUFAB1-204ENST00000567761 520 ntTSL 35.42□□□□□ -1.547e-7■■■□□ 15.8
LARP4Q71RC2 MDH2-202ENST00000424167 681 ntTSL 211.29□□□□□ -0.62e-7■■■□□ 15.8
LARP4Q71RC2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.231e-323■■■□□ 15.8
LARP4Q71RC2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.181e-323■■■□□ 15.8
LARP4Q71RC2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-9■■■□□ 15.8
LARP4Q71RC2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.04□□□□□ -0.323e-9■■■□□ 15.8
LARP4Q71RC2 OAZ1-208ENST00000592727 726 ntTSL 214.01□□□□□ -0.171e-13■■■□□ 15.8
LARP4Q71RC2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.236e-8■■■□□ 15.8
LARP4Q71RC2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.94□□□□□ -0.026e-8■■■□□ 15.8
LARP4Q71RC2 SLC1A4-203ENST00000480594 5789 ntTSL 210.37□□□□□ -0.756e-8■■■□□ 15.8
LARP4Q71RC2 C9orf16-204ENST00000492588 1570 ntTSL 517.11■□□□□ 0.331e-9■■■□□ 15.8
LARP4Q71RC2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.221e-9■■■□□ 15.8
LARP4Q71RC2 C9orf16-202ENST00000486420 434 ntTSL 511.53□□□□□ -0.561e-9■■■□□ 15.8
Retrieved 100 of 15,922 protein–RNA pairs in 299.1 ms