RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
SLC1A4-203ENST00000480594 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
SLC1A4-203ENST00000480594 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
SLC1A4-203ENST00000480594 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
SLC1A4-203ENST00000480594 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
SLC1A4-203ENST00000480594 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
SLC1A4-203ENST00000480594 APLP2Q06481 763 aa16.9■□□□□ 0.3
SLC1A4-203ENST00000480594 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
SLC1A4-203ENST00000480594 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
SLC1A4-203ENST00000480594 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
SLC1A4-203ENST00000480594 MYT1Q01538 1121 aa16.65■□□□□ 0.26
SLC1A4-203ENST00000480594 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
SLC1A4-203ENST00000480594 ERICH6Q7L0X2 663 aa16.58■□□□□ 0.24
SLC1A4-203ENST00000480594 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
SLC1A4-203ENST00000480594 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
SLC1A4-203ENST00000480594 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
SLC1A4-203ENST00000480594 NEFLP07196 543 aa16.31■□□□□ 0.2
SLC1A4-203ENST00000480594 HRCP23327 699 aa16.23■□□□□ 0.19
SLC1A4-203ENST00000480594 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
SLC1A4-203ENST00000480594 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
SLC1A4-203ENST00000480594 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
SLC1A4-203ENST00000480594 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
SLC1A4-203ENST00000480594 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
SLC1A4-203ENST00000480594 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
SLC1A4-203ENST00000480594 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
SLC1A4-203ENST00000480594 DAXXQ9UER7 740 aaPredicted RBP15.8■□□□□ 0.12
SLC1A4-203ENST00000480594 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
SLC1A4-203ENST00000480594 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.1
SLC1A4-203ENST00000480594 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
SLC1A4-203ENST00000480594 ITGAEP38570 1179 aa15.65■□□□□ 0.1
SLC1A4-203ENST00000480594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
SLC1A4-203ENST00000480594 RTL5Q5HYW3 569 aaPredicted RBP15.57■□□□□ 0.08
SLC1A4-203ENST00000480594 POLR3GLQ9BT43 218 aa15.56■□□□□ 0.08
SLC1A4-203ENST00000480594 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
SLC1A4-203ENST00000480594 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
SLC1A4-203ENST00000480594 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
SLC1A4-203ENST00000480594 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
SLC1A4-203ENST00000480594 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
SLC1A4-203ENST00000480594 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
SLC1A4-203ENST00000480594 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
SLC1A4-203ENST00000480594 ANP32CO43423 234 aa15.3■□□□□ 0.04
SLC1A4-203ENST00000480594 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
SLC1A4-203ENST00000480594 BCANQ96GW7 911 aa15.28■□□□□ 0.04
SLC1A4-203ENST00000480594 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
SLC1A4-203ENST00000480594 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
SLC1A4-203ENST00000480594 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
SLC1A4-203ENST00000480594 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
SLC1A4-203ENST00000480594 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
SLC1A4-203ENST00000480594 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
SLC1A4-203ENST00000480594 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
SLC1A4-203ENST00000480594 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
SLC1A4-203ENST00000480594 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
SLC1A4-203ENST00000480594 FKBP8Q14318 412 aa14.94□□□□□ -0.02
SLC1A4-203ENST00000480594 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
SLC1A4-203ENST00000480594 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
SLC1A4-203ENST00000480594 ABCC9O60706 1549 aa14.83□□□□□ -0.04
SLC1A4-203ENST00000480594 TONSLQ96HA7 1378 aa14.82□□□□□ -0.04
SLC1A4-203ENST00000480594 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
SLC1A4-203ENST00000480594 NEFMP07197 916 aa14.81□□□□□ -0.04
SLC1A4-203ENST00000480594 HNRNPUQ00839 825 aaKnown RBP eCLIP14.81□□□□□ -0.04
SLC1A4-203ENST00000480594 ANP32BQ92688 251 aaKnown RBP14.78□□□□□ -0.04
SLC1A4-203ENST00000480594 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.05
SLC1A4-203ENST00000480594 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
SLC1A4-203ENST00000480594 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
SLC1A4-203ENST00000480594 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
SLC1A4-203ENST00000480594 GLIPR1L2Q4G1C9 344 aa14.73□□□□□ -0.05
SLC1A4-203ENST00000480594 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
SLC1A4-203ENST00000480594 CCDC136Q96JN2 1154 aa14.7□□□□□ -0.06
SLC1A4-203ENST00000480594 MIER1Q8N108 512 aa14.67□□□□□ -0.06
SLC1A4-203ENST00000480594 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
SLC1A4-203ENST00000480594 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
SLC1A4-203ENST00000480594 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
SLC1A4-203ENST00000480594 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
SLC1A4-203ENST00000480594 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
SLC1A4-203ENST00000480594 NBR1Q14596 966 aa14.64□□□□□ -0.07
SLC1A4-203ENST00000480594 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
SLC1A4-203ENST00000480594 FBLN2P98095 1184 aa14.62□□□□□ -0.07
SLC1A4-203ENST00000480594 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
SLC1A4-203ENST00000480594 ARID3CA6NKF2 412 aa14.6□□□□□ -0.07
SLC1A4-203ENST00000480594 MRS2Q9HD23 443 aa14.59□□□□□ -0.07
SLC1A4-203ENST00000480594 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
SLC1A4-203ENST00000480594 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
SLC1A4-203ENST00000480594 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
SLC1A4-203ENST00000480594 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
SLC1A4-203ENST00000480594 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
SLC1A4-203ENST00000480594 SALL2Q9Y467 1007 aaPredicted RBP14.51□□□□□ -0.09
SLC1A4-203ENST00000480594 CLIP1P30622 1438 aa14.51□□□□□ -0.09
SLC1A4-203ENST00000480594 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
SLC1A4-203ENST00000480594 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
SLC1A4-203ENST00000480594 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
SLC1A4-203ENST00000480594 EEA1Q15075 1411 aa14.47□□□□□ -0.09
SLC1A4-203ENST00000480594 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
SLC1A4-203ENST00000480594 BECN1Q14457 450 aa14.44□□□□□ -0.1
SLC1A4-203ENST00000480594 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
SLC1A4-203ENST00000480594 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
SLC1A4-203ENST00000480594 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
SLC1A4-203ENST00000480594 ARXQ96QS3 562 aa14.4□□□□□ -0.1
SLC1A4-203ENST00000480594 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
SLC1A4-203ENST00000480594 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
SLC1A4-203ENST00000480594 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms