RNA–Protein interactions for RNA: ENST00000557247.1

KLHDC2-211, Transcript of kelch domain containing 2, humanhuman

TSL 5 BASIC

Gene KLHDC2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-211ENST00000557247 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
KLHDC2-211ENST00000557247 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
KLHDC2-211ENST00000557247 ABCC9O60706 1549 aa26.8■■□□□ 1.88
KLHDC2-211ENST00000557247 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
KLHDC2-211ENST00000557247 NACADO15069 1562 aa25.64■■□□□ 1.69
KLHDC2-211ENST00000557247 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
KLHDC2-211ENST00000557247 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
KLHDC2-211ENST00000557247 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
KLHDC2-211ENST00000557247 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
KLHDC2-211ENST00000557247 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
KLHDC2-211ENST00000557247 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
KLHDC2-211ENST00000557247 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
KLHDC2-211ENST00000557247 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
KLHDC2-211ENST00000557247 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
KLHDC2-211ENST00000557247 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
KLHDC2-211ENST00000557247 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
KLHDC2-211ENST00000557247 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
KLHDC2-211ENST00000557247 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
KLHDC2-211ENST00000557247 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
KLHDC2-211ENST00000557247 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
KLHDC2-211ENST00000557247 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
KLHDC2-211ENST00000557247 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
KLHDC2-211ENST00000557247 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
KLHDC2-211ENST00000557247 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
KLHDC2-211ENST00000557247 PEG3Q9GZU2 1588 aa23.54■■□□□ 1.36
KLHDC2-211ENST00000557247 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
KLHDC2-211ENST00000557247 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
KLHDC2-211ENST00000557247 WIZO95785 1651 aa23.33■■□□□ 1.33
KLHDC2-211ENST00000557247 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
KLHDC2-211ENST00000557247 NESP48681 1621 aa23.18■■□□□ 1.3
KLHDC2-211ENST00000557247 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
KLHDC2-211ENST00000557247 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
KLHDC2-211ENST00000557247 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
KLHDC2-211ENST00000557247 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
KLHDC2-211ENST00000557247 CUX2O14529 1486 aa22.89■■□□□ 1.25
KLHDC2-211ENST00000557247 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
KLHDC2-211ENST00000557247 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
KLHDC2-211ENST00000557247 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
KLHDC2-211ENST00000557247 CFTRP13569 1480 aa22.82■■□□□ 1.24
KLHDC2-211ENST00000557247 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
KLHDC2-211ENST00000557247 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
KLHDC2-211ENST00000557247 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
KLHDC2-211ENST00000557247 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
KLHDC2-211ENST00000557247 WDR62O43379 1518 aa22.63■■□□□ 1.21
KLHDC2-211ENST00000557247 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
KLHDC2-211ENST00000557247 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
KLHDC2-211ENST00000557247 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
KLHDC2-211ENST00000557247 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.18
KLHDC2-211ENST00000557247 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
KLHDC2-211ENST00000557247 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
KLHDC2-211ENST00000557247 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
KLHDC2-211ENST00000557247 IFT140Q96RY7 1462 aa22.21■■□□□ 1.15
KLHDC2-211ENST00000557247 ZNF608Q9ULD9 1512 aaPredicted RBP22.17■■□□□ 1.14
KLHDC2-211ENST00000557247 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
KLHDC2-211ENST00000557247 CUX1P39880 1505 aa22.14■■□□□ 1.13
KLHDC2-211ENST00000557247 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
KLHDC2-211ENST00000557247 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
KLHDC2-211ENST00000557247 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
KLHDC2-211ENST00000557247 SOGA1O94964 1423 aa22.04■■□□□ 1.12
KLHDC2-211ENST00000557247 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
KLHDC2-211ENST00000557247 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.124e-6■■■■■ 31
KLHDC2-211ENST00000557247 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
KLHDC2-211ENST00000557247 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
KLHDC2-211ENST00000557247 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
KLHDC2-211ENST00000557247 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
KLHDC2-211ENST00000557247 SYNJ1O43426 1573 aa21.89■■□□□ 1.1
KLHDC2-211ENST00000557247 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.1
KLHDC2-211ENST00000557247 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
KLHDC2-211ENST00000557247 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
KLHDC2-211ENST00000557247 CHD1O14646 1710 aa21.8■■□□□ 1.08
KLHDC2-211ENST00000557247 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
KLHDC2-211ENST00000557247 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
KLHDC2-211ENST00000557247 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
KLHDC2-211ENST00000557247 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
KLHDC2-211ENST00000557247 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
KLHDC2-211ENST00000557247 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
KLHDC2-211ENST00000557247 FBLN2P98095 1184 aa21.73■■□□□ 1.07
KLHDC2-211ENST00000557247 SYNJ2O15056 1496 aa21.66■■□□□ 1.06
KLHDC2-211ENST00000557247 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
KLHDC2-211ENST00000557247 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
KLHDC2-211ENST00000557247 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
KLHDC2-211ENST00000557247 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
KLHDC2-211ENST00000557247 ARHGEF11O15085 1522 aa21.58■■□□□ 1.05
KLHDC2-211ENST00000557247 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
KLHDC2-211ENST00000557247 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
KLHDC2-211ENST00000557247 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
KLHDC2-211ENST00000557247 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
KLHDC2-211ENST00000557247 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
KLHDC2-211ENST00000557247 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
KLHDC2-211ENST00000557247 NUP160Q12769 1436 aa21.45■■□□□ 1.02
KLHDC2-211ENST00000557247 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
KLHDC2-211ENST00000557247 IGF1RP08069 1367 aa21.44■■□□□ 1.02
KLHDC2-211ENST00000557247 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
KLHDC2-211ENST00000557247 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
KLHDC2-211ENST00000557247 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
KLHDC2-211ENST00000557247 CUL7Q14999 1698 aa21.33■■□□□ 1
KLHDC2-211ENST00000557247 ERCC6L2Q5T890 1561 aa21.3■■□□□ 1
KLHDC2-211ENST00000557247 SHROOM2Q13796 1616 aa21.3■■□□□ 1
KLHDC2-211ENST00000557247 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
KLHDC2-211ENST00000557247 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms