RNA–Protein interactions for RNA: ENST00000555443.5

KLHDC2-207, Transcript of kelch domain containing 2, humanhuman

TSL 2

Gene KLHDC2, Length 1,756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-207ENST00000555443 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
KLHDC2-207ENST00000555443 CCDC180Q9P1Z9 1646 aa40.39■■■■■ 4.06
KLHDC2-207ENST00000555443 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
KLHDC2-207ENST00000555443 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
KLHDC2-207ENST00000555443 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
KLHDC2-207ENST00000555443 ABCC9O60706 1549 aa37.94■■■■□ 3.66
KLHDC2-207ENST00000555443 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
KLHDC2-207ENST00000555443 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
KLHDC2-207ENST00000555443 NACADO15069 1562 aa37.56■■■■□ 3.6
KLHDC2-207ENST00000555443 RB1CC1Q8TDY2 1594 aa37.19■■■■□ 3.54
KLHDC2-207ENST00000555443 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
KLHDC2-207ENST00000555443 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
KLHDC2-207ENST00000555443 SUPT5HO00267 1087 aaKnown RBP36.35■■■■□ 3.41
KLHDC2-207ENST00000555443 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
KLHDC2-207ENST00000555443 RSF1Q96T23 1441 aaPredicted RBP35.93■■■■□ 3.34
KLHDC2-207ENST00000555443 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
KLHDC2-207ENST00000555443 BAZ1AQ9NRL2 1556 aaPredicted RBP35.76■■■■□ 3.31
KLHDC2-207ENST00000555443 PABPN1Q86U42 306 aaKnown RBP eCLIP35.75■■■■□ 3.31
KLHDC2-207ENST00000555443 MROH2BQ7Z745 1585 aa35.74■■■■□ 3.31
KLHDC2-207ENST00000555443 SMARCA4P51532 1647 aa35.58■■■■□ 3.29
KLHDC2-207ENST00000555443 WIZO95785 1651 aa35.47■■■■□ 3.27
KLHDC2-207ENST00000555443 PEG3Q9GZU2 1588 aa35.18■■■■□ 3.22
KLHDC2-207ENST00000555443 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
KLHDC2-207ENST00000555443 SMARCA2P51531 1590 aa34.96■■■■□ 3.19
KLHDC2-207ENST00000555443 EIF4G1Q04637 1599 aaKnown RBP34.95■■■■□ 3.19
KLHDC2-207ENST00000555443 ATAD2BQ9ULI0 1458 aa34.93■■■■□ 3.18
KLHDC2-207ENST00000555443 CHIC1Q5VXU3 224 aa34.92■■■■□ 3.18
KLHDC2-207ENST00000555443 BAZ1BQ9UIG0 1483 aaKnown RBP34.75■■■■□ 3.15
KLHDC2-207ENST00000555443 CCDC88BA6NC98 1476 aa34.74■■■■□ 3.15
KLHDC2-207ENST00000555443 HMGXB3Q12766 1538 aa34.63■■■■□ 3.13
KLHDC2-207ENST00000555443 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
KLHDC2-207ENST00000555443 CC2D2AQ9P2K1 1620 aa34.4■■■■□ 3.1
KLHDC2-207ENST00000555443 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
KLHDC2-207ENST00000555443 ABCC8Q09428 1581 aa34.02■■■■□ 3.04
KLHDC2-207ENST00000555443 CFTRP13569 1480 aa33.89■■■■□ 3.02
KLHDC2-207ENST00000555443 PRDM2Q13029 1718 aa33.84■■■■□ 3.01
KLHDC2-207ENST00000555443 WRNQ14191 1432 aaPredicted RBP eCLIP33.82■■■■□ 3
KLHDC2-207ENST00000555443 CADPSQ9ULU8 1353 aa33.73■■■□□ 2.99
KLHDC2-207ENST00000555443 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
KLHDC2-207ENST00000555443 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
KLHDC2-207ENST00000555443 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
KLHDC2-207ENST00000555443 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
KLHDC2-207ENST00000555443 FAM9AQ8IZU1 332 aaPredicted RBP33.52■■■□□ 2.96
KLHDC2-207ENST00000555443 LAMC3Q9Y6N6 1575 aa33.46■■■□□ 2.95
KLHDC2-207ENST00000555443 EEA1Q15075 1411 aa33.45■■■□□ 2.95
KLHDC2-207ENST00000555443 CUX1P39880 1505 aa33.43■■■□□ 2.94
KLHDC2-207ENST00000555443 SOGA1O94964 1423 aa33.4■■■□□ 2.94
KLHDC2-207ENST00000555443 DNAJC5BQ9UF47 199 aa33.37■■■□□ 2.93
KLHDC2-207ENST00000555443 FANCD2Q9BXW9 1451 aa33.36■■■□□ 2.93
KLHDC2-207ENST00000555443 NESP48681 1621 aa33.35■■■□□ 2.93
KLHDC2-207ENST00000555443 RUSC2Q8N2Y8 1516 aa33.26■■■□□ 2.91
KLHDC2-207ENST00000555443 CSRNP3Q8WYN3 585 aa33.18■■■□□ 2.9
KLHDC2-207ENST00000555443 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
KLHDC2-207ENST00000555443 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
KLHDC2-207ENST00000555443 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
KLHDC2-207ENST00000555443 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
KLHDC2-207ENST00000555443 KIF21AQ7Z4S6 1674 aa33.03■■■□□ 2.88
KLHDC2-207ENST00000555443 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
KLHDC2-207ENST00000555443 KIF21BO75037 1637 aa33.02■■■□□ 2.88
KLHDC2-207ENST00000555443 EHMT2Q96KQ7 1210 aa32.98■■■□□ 2.87
KLHDC2-207ENST00000555443 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
KLHDC2-207ENST00000555443 KIF27Q86VH2 1401 aa32.96■■■□□ 2.87
KLHDC2-207ENST00000555443 URB2Q14146 1524 aaKnown RBP32.93■■■□□ 2.86
KLHDC2-207ENST00000555443 TNIKQ9UKE5 1360 aa32.88■■■□□ 2.85
KLHDC2-207ENST00000555443 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
KLHDC2-207ENST00000555443 CUX2O14529 1486 aa32.83■■■□□ 2.85
KLHDC2-207ENST00000555443 PRXQ9BXM0 1461 aa32.78■■■□□ 2.84
KLHDC2-207ENST00000555443 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
KLHDC2-207ENST00000555443 ABCA10Q8WWZ4 1543 aa32.78■■■□□ 2.84
KLHDC2-207ENST00000555443 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
KLHDC2-207ENST00000555443 RAPGEF2Q9Y4G8 1499 aa32.73■■■□□ 2.83
KLHDC2-207ENST00000555443 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
KLHDC2-207ENST00000555443 RAD54L2Q9Y4B4 1467 aa32.72■■■□□ 2.83
KLHDC2-207ENST00000555443 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
KLHDC2-207ENST00000555443 CEP162Q5TB80 1403 aa32.69■■■□□ 2.82
KLHDC2-207ENST00000555443 IGF1RP08069 1367 aa32.64■■■□□ 2.82
KLHDC2-207ENST00000555443 WDR62O43379 1518 aa32.57■■■□□ 2.81
KLHDC2-207ENST00000555443 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
KLHDC2-207ENST00000555443 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
KLHDC2-207ENST00000555443 ABCA5Q8WWZ7 1642 aa32.52■■■□□ 2.8
KLHDC2-207ENST00000555443 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
KLHDC2-207ENST00000555443 CUL7Q14999 1698 aa32.46■■■□□ 2.79
KLHDC2-207ENST00000555443 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.79
KLHDC2-207ENST00000555443 CLIP1P30622 1438 aa32.41■■■□□ 2.78
KLHDC2-207ENST00000555443 GAPVD1Q14C86 1478 aa32.4■■■□□ 2.78
KLHDC2-207ENST00000555443 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
KLHDC2-207ENST00000555443 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
KLHDC2-207ENST00000555443 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
KLHDC2-207ENST00000555443 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
KLHDC2-207ENST00000555443 TRIM26Q12899 539 aaPredicted RBP32.16■■■□□ 2.74
KLHDC2-207ENST00000555443 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.744e-6■■■■■ 31
KLHDC2-207ENST00000555443 GRIN2BQ13224 1484 aa32.14■■■□□ 2.74
KLHDC2-207ENST00000555443 CTTNBP2Q8WZ74 1663 aa32.13■■■□□ 2.73
KLHDC2-207ENST00000555443 ZNF608Q9ULD9 1512 aaPredicted RBP32.12■■■□□ 2.73
KLHDC2-207ENST00000555443 PCGF6Q9BYE7 350 aa32.11■■■□□ 2.73
KLHDC2-207ENST00000555443 ARAP1Q96P48 1450 aa32.09■■■□□ 2.73
KLHDC2-207ENST00000555443 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.73
KLHDC2-207ENST00000555443 ADAMTS12P58397 1594 aa32.07■■■□□ 2.73
KLHDC2-207ENST00000555443 RANGAP1P46060 587 aaPredicted RBP32.07■■■□□ 2.72
KLHDC2-207ENST00000555443 FHAD1B1AJZ9 1412 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms