RNA–Protein interactions for RNA: ENST00000564296.5

CDIPT-206, Transcript of CDP-diacylglycerol--inositol 3-phosphatidyltransferase, humanhuman

TSL 2

Gene CDIPT, Length 1,015 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIPT-206ENST00000564296 NISCHQ9Y2I1 1504 aa47.18■■■■■ 5.14
CDIPT-206ENST00000564296 CCDC180Q9P1Z9 1646 aa41.69■■■■■ 4.26
CDIPT-206ENST00000564296 ABCC9O60706 1549 aa40.57■■■■■ 4.09
CDIPT-206ENST00000564296 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
CDIPT-206ENST00000564296 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
CDIPT-206ENST00000564296 NACADO15069 1562 aa39.16■■■■□ 3.86
CDIPT-206ENST00000564296 RB1CC1Q8TDY2 1594 aa39.12■■■■□ 3.85
CDIPT-206ENST00000564296 MYO15BQ96JP2 1530 aa39.03■■■■□ 3.84
CDIPT-206ENST00000564296 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
CDIPT-206ENST00000564296 UNC13AQ9UPW8 1703 aa38.19■■■■□ 3.7
CDIPT-206ENST00000564296 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
CDIPT-206ENST00000564296 PABPN1Q86U42 306 aaKnown RBP eCLIP38.06■■■■□ 3.68
CDIPT-206ENST00000564296 DNAJC5BQ9UF47 199 aa37.97■■■■□ 3.67
CDIPT-206ENST00000564296 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
CDIPT-206ENST00000564296 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
CDIPT-206ENST00000564296 EIF4G1Q04637 1599 aaKnown RBP36.9■■■■□ 3.5
CDIPT-206ENST00000564296 CECR2Q9BXF3 1484 aa36.76■■■■□ 3.48
CDIPT-206ENST00000564296 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
CDIPT-206ENST00000564296 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
CDIPT-206ENST00000564296 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
CDIPT-206ENST00000564296 MROH2BQ7Z745 1585 aa36.39■■■■□ 3.42
CDIPT-206ENST00000564296 ATAD2BQ9ULI0 1458 aa36.25■■■■□ 3.39
CDIPT-206ENST00000564296 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
CDIPT-206ENST00000564296 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
CDIPT-206ENST00000564296 RSF1Q96T23 1441 aaPredicted RBP36.12■■■■□ 3.37
CDIPT-206ENST00000564296 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
CDIPT-206ENST00000564296 WIZO95785 1651 aa36■■■■□ 3.35
CDIPT-206ENST00000564296 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
CDIPT-206ENST00000564296 HMGXB3Q12766 1538 aa35.97■■■■□ 3.35
CDIPT-206ENST00000564296 SUPT5HO00267 1087 aaKnown RBP35.61■■■■□ 3.29
CDIPT-206ENST00000564296 TOP2AP11388 1531 aaKnown RBP35.61■■■■□ 3.29
CDIPT-206ENST00000564296 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
CDIPT-206ENST00000564296 NESP48681 1621 aa35.22■■■■□ 3.23
CDIPT-206ENST00000564296 CADPSQ9ULU8 1353 aa35.18■■■■□ 3.22
CDIPT-206ENST00000564296 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
CDIPT-206ENST00000564296 CFTRP13569 1480 aa35■■■■□ 3.19
CDIPT-206ENST00000564296 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
CDIPT-206ENST00000564296 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
CDIPT-206ENST00000564296 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
CDIPT-206ENST00000564296 CUX2O14529 1486 aa34.82■■■■□ 3.16
CDIPT-206ENST00000564296 FANCD2Q9BXW9 1451 aa34.74■■■■□ 3.15
CDIPT-206ENST00000564296 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
CDIPT-206ENST00000564296 PRDM2Q13029 1718 aa34.66■■■■□ 3.14
CDIPT-206ENST00000564296 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
CDIPT-206ENST00000564296 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
CDIPT-206ENST00000564296 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
CDIPT-206ENST00000564296 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
CDIPT-206ENST00000564296 WDR62O43379 1518 aa34.35■■■■□ 3.09
CDIPT-206ENST00000564296 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
CDIPT-206ENST00000564296 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
CDIPT-206ENST00000564296 DNMBPQ6XZF7 1577 aa34.18■■■■□ 3.06
CDIPT-206ENST00000564296 CUX1P39880 1505 aa34.1■■■■□ 3.05
CDIPT-206ENST00000564296 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
CDIPT-206ENST00000564296 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.03
CDIPT-206ENST00000564296 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
CDIPT-206ENST00000564296 IFT140Q96RY7 1462 aa33.91■■■■□ 3.02
CDIPT-206ENST00000564296 SYNJ1O43426 1573 aa33.9■■■■□ 3.02
CDIPT-206ENST00000564296 SOGA1O94964 1423 aa33.88■■■■□ 3.01
CDIPT-206ENST00000564296 TOP2BQ02880 1626 aa33.88■■■■□ 3.01
CDIPT-206ENST00000564296 RAD54L2Q9Y4B4 1467 aa33.85■■■■□ 3.01
CDIPT-206ENST00000564296 BIVM-ERCC5R4GMW8 1640 aa33.85■■■■□ 3.01
CDIPT-206ENST00000564296 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
CDIPT-206ENST00000564296 ZNF608Q9ULD9 1512 aaPredicted RBP33.75■■■□□ 2.99
CDIPT-206ENST00000564296 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
CDIPT-206ENST00000564296 AQRO60306 1485 aaKnown RBP eCLIP33.65■■■□□ 2.98
CDIPT-206ENST00000564296 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
CDIPT-206ENST00000564296 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
CDIPT-206ENST00000564296 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
CDIPT-206ENST00000564296 WDR97A6NE52 1622 aa33.54■■■□□ 2.96
CDIPT-206ENST00000564296 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
CDIPT-206ENST00000564296 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
CDIPT-206ENST00000564296 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
CDIPT-206ENST00000564296 GRIN2BQ13224 1484 aa33.39■■■□□ 2.94
CDIPT-206ENST00000564296 KIF27Q86VH2 1401 aa33.31■■■□□ 2.92
CDIPT-206ENST00000564296 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
CDIPT-206ENST00000564296 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
CDIPT-206ENST00000564296 FBLN2P98095 1184 aa33.24■■■□□ 2.91
CDIPT-206ENST00000564296 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
CDIPT-206ENST00000564296 MAGI1Q96QZ7 1491 aaPredicted RBP33.24■■■□□ 2.91
CDIPT-206ENST00000564296 ERICH3Q5RHP9 1530 aa33.2■■■□□ 2.91
CDIPT-206ENST00000564296 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
CDIPT-206ENST00000564296 IGF1RP08069 1367 aa33.17■■■□□ 2.9
CDIPT-206ENST00000564296 RUSC2Q8N2Y8 1516 aa33.16■■■□□ 2.9
CDIPT-206ENST00000564296 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
CDIPT-206ENST00000564296 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
CDIPT-206ENST00000564296 CHD1O14646 1710 aa33.08■■■□□ 2.89
CDIPT-206ENST00000564296 ADAMTS12P58397 1594 aa33.06■■■□□ 2.88
CDIPT-206ENST00000564296 CARMIL1Q5VZK9 1371 aa32.97■■■□□ 2.87
CDIPT-206ENST00000564296 GRIN2AQ12879 1464 aa32.95■■■□□ 2.87
CDIPT-206ENST00000564296 CUL7Q14999 1698 aa32.94■■■□□ 2.86
CDIPT-206ENST00000564296 FAM9AQ8IZU1 332 aaPredicted RBP32.92■■■□□ 2.86
CDIPT-206ENST00000564296 CSRNP3Q8WYN3 585 aa32.9■■■□□ 2.86
CDIPT-206ENST00000564296 EEA1Q15075 1411 aa32.9■■■□□ 2.86
CDIPT-206ENST00000564296 RIMBP3CA6NJZ7 1639 aa32.79■■■□□ 2.84
CDIPT-206ENST00000564296 RIMBP3BA6NNM3 1639 aa32.79■■■□□ 2.84
CDIPT-206ENST00000564296 RIMBP3Q9UFD9 1639 aa32.79■■■□□ 2.84
CDIPT-206ENST00000564296 RAPGEF2Q9Y4G8 1499 aa32.79■■■□□ 2.84
CDIPT-206ENST00000564296 NUP160Q12769 1436 aa32.78■■■□□ 2.84
CDIPT-206ENST00000564296 CEP170Q5SW79 1584 aa32.76■■■□□ 2.84
CDIPT-206ENST00000564296 PRXQ9BXM0 1461 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms