Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ECHDC2-222ENST00000539680 5817 nt5.89□□□□□ -1.479e-8■■□□□ 11.5
PRPF8Q6P2Q9 AMPD2-213ENST00000524975 678 ntTSL 315.99■□□□□ 0.154e-13■■□□□ 11.5
PRPF8Q6P2Q9 VASP-203ENST00000586619 655 ntTSL 216.21■□□□□ 0.194e-8■■□□□ 11.5
PRPF8Q6P2Q9 MROH6-204ENST00000532704 424 ntTSL 211.17□□□□□ -0.621e-10■■□□□ 11.5
PRPF8Q6P2Q9 ZSWIM8-209ENST00000466568 466 ntTSL 28.96□□□□□ -0.972e-7■■□□□ 11.5
PRPF8Q6P2Q9 PABPC1L-209ENST00000465761 801 ntTSL 28.77□□□□□ -13e-10■■□□□ 11.5
PRPF8Q6P2Q9 BCAR1-222ENST00000569340 714 ntTSL 311.24□□□□□ -0.611e-9■■□□□ 11.5
PRPF8Q6P2Q9 TM9SF3-202ENST00000443638 868 ntTSL 31.67□□□□□ -2.143e-8■■□□□ 11.5
PRPF8Q6P2Q9 TM9SF3-204ENST00000475401 511 ntTSL 20.61□□□□□ -2.313e-8■■□□□ 11.5
PRPF8Q6P2Q9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.77■■□□□ 1.071e-9■■□□□ 11.5
PRPF8Q6P2Q9 DEAF1-207ENST00000527170 1623 ntTSL 1 (best)13.02□□□□□ -0.321e-6■■□□□ 11.5
PRPF8Q6P2Q9 MON1B-207ENST00000566455 2864 ntTSL 29.16□□□□□ -0.943e-8■■□□□ 11.5
PRPF8Q6P2Q9 SNORD18A-201ENST00000363753 72 ntBASIC0.21□□□□□ -2.382e-8■■□□□ 11.5
PRPF8Q6P2Q9 MYRF-206ENST00000537766 1392 ntTSL 320.87■□□□□ 0.933e-7■■□□□ 11.5
PRPF8Q6P2Q9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.76□□□□□ -0.052e-7■■□□□ 11.5
PRPF8Q6P2Q9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.15□□□□□ -0.142e-7■■□□□ 11.5
PRPF8Q6P2Q9 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC11.59□□□□□ -0.552e-7■■□□□ 11.5
PRPF8Q6P2Q9 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC11.18□□□□□ -0.622e-7■■□□□ 11.5
PRPF8Q6P2Q9 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-7■■□□□ 11.5
PRPF8Q6P2Q9 AC009779.3-201ENST00000551946 1024 ntTSL 210.35□□□□□ -0.752e-7■■□□□ 11.5
PRPF8Q6P2Q9 AC009779.3-203ENST00000257899 745 ntTSL 59.71□□□□□ -0.862e-7■■□□□ 11.5
PRPF8Q6P2Q9 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.062e-7■■□□□ 11.5
PRPF8Q6P2Q9 BLOC1S1-206ENST00000553100 421 ntTSL 28.21□□□□□ -1.092e-7■■□□□ 11.5
PRPF8Q6P2Q9 SUN2-211ENST00000455125 872 ntTSL 211.44□□□□□ -0.582e-10■■□□□ 11.5
PRPF8Q6P2Q9 TLK2-217ENST00000583843 767 ntTSL 57.32□□□□□ -1.245e-9■■□□□ 11.5
PRPF8Q6P2Q9 DMPK-207ENST00000593574 548 ntTSL 418.01■□□□□ 0.475e-6■■□□□ 11.5
PRPF8Q6P2Q9 DMPK-218ENST00000600370 723 ntTSL 512.53□□□□□ -0.45e-6■■□□□ 11.5
PRPF8Q6P2Q9 CNN3-206ENST00000487539 739 ntTSL 24.2□□□□□ -1.745e-6■■□□□ 11.5
PRPF8Q6P2Q9 FARP1-205ENST00000457029 602 ntTSL 57.23□□□□□ -1.259e-7■■□□□ 11.5
PRPF8Q6P2Q9 RBM19-205ENST00000552384 588 ntTSL 317.65■□□□□ 0.429e-15■■□□□ 11.5
PRPF8Q6P2Q9 GTF2I-213ENST00000613513 538 ntTSL 416.88■□□□□ 0.292e-29■■□□□ 11.5
PRPF8Q6P2Q9 YWHAE-206ENST00000496706 732 ntTSL 30.39□□□□□ -2.359e-14■■□□□ 11.5
PRPF8Q6P2Q9 WFS1-204ENST00000506588 587 ntTSL 212.13□□□□□ -0.472e-8■■□□□ 11.5
PRPF8Q6P2Q9 EXOC3L4-203ENST00000559661 665 ntTSL 515.44■□□□□ 0.063e-8■■□□□ 11.5
PRPF8Q6P2Q9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.343e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.283e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.283e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCSAP-204ENST00000483092 3492 ntTSL 1 (best)12.57□□□□□ -0.43e-6■■□□□ 11.5
PRPF8Q6P2Q9 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)11.48□□□□□ -0.573e-6■■□□□ 11.5
PRPF8Q6P2Q9 GPS1-223ENST00000584229 535 ntTSL 320.83■□□□□ 0.938e-22■■□□□ 11.5
PRPF8Q6P2Q9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.513e-7■■□□□ 11.5
PRPF8Q6P2Q9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.89■□□□□ 0.463e-7■■□□□ 11.5
PRPF8Q6P2Q9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.65■□□□□ 0.423e-7■■□□□ 11.5
PRPF8Q6P2Q9 URM1-201ENST00000372847 753 ntTSL 3 BASIC9.13□□□□□ -0.953e-7■■□□□ 11.5
PRPF8Q6P2Q9 MRPL37-204ENST00000487096 747 ntTSL 36.73□□□□□ -1.333e-7■■□□□ 11.5
PRPF8Q6P2Q9 MRPL37-205ENST00000490670 669 ntTSL 36.31□□□□□ -1.43e-7■■□□□ 11.5
PRPF8Q6P2Q9 TBC1D17-208ENST00000600354 1547 ntTSL 212.59□□□□□ -0.392e-6■■□□□ 11.5
PRPF8Q6P2Q9 ZFAND2B-209ENST00000422255 705 ntTSL 310.21□□□□□ -0.783e-6■■□□□ 11.5
PRPF8Q6P2Q9 IL4R-205ENST00000561946 611 ntTSL 39.95□□□□□ -0.822e-6■■□□□ 11.5
PRPF8Q6P2Q9 B2M-210ENST00000560681 572 ntTSL 413.59□□□□□ -0.239e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-207ENST00000559907 499 ntTSL 312.16□□□□□ -0.469e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-202ENST00000544417 933 ntTSL 5 BASIC10.02□□□□□ -0.89e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -19e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-206ENST00000559720 1220 ntTSL 58.29□□□□□ -1.089e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-212ENST00000561424 604 ntTSL 38.29□□□□□ -1.089e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-203ENST00000557901 407 ntTSL 1 (best)6.84□□□□□ -1.319e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.379e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-201ENST00000349264 732 ntTSL 34.98□□□□□ -1.619e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-205ENST00000559220 580 ntTSL 54.6□□□□□ -1.679e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-213ENST00000623550 2329 nt4.5□□□□□ -1.699e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-209ENST00000560556 472 ntTSL 32.75□□□□□ -1.979e-9■■□□□ 11.5
PRPF8Q6P2Q9 B2M-211ENST00000561139 717 ntTSL 31.39□□□□□ -2.199e-9■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.63□□□□□ -0.079e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.319e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.419e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.31□□□□□ -0.449e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.21□□□□□ -0.459e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC10.09□□□□□ -0.799e-7■■□□□ 11.5
PRPF8Q6P2Q9 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)6.43□□□□□ -1.381e-18■■□□□ 11.5
PRPF8Q6P2Q9 GMPR2-211ENST00000558748 657 ntTSL 314.22□□□□□ -0.131e-8■■□□□ 11.5
PRPF8Q6P2Q9 GMPR2-207ENST00000558007 469 ntTSL 214.21□□□□□ -0.131e-8■■□□□ 11.5
PRPF8Q6P2Q9 GMPR2-220ENST00000559479 573 ntTSL 36.83□□□□□ -1.321e-8■■□□□ 11.5
PRPF8Q6P2Q9 GMPR2-215ENST00000558932 231 ntTSL 34.78□□□□□ -1.641e-8■■□□□ 11.5
PRPF8Q6P2Q9 TCF25-215ENST00000565404 477 ntTSL 25.91□□□□□ -1.468e-7■■□□□ 11.5
PRPF8Q6P2Q9 CLN6-215ENST00000636674 2005 ntTSL 510.7□□□□□ -0.77e-7■■□□□ 11.4
PRPF8Q6P2Q9 CLN6-217ENST00000636964 3335 ntTSL 29.29□□□□□ -0.927e-7■■□□□ 11.4
PRPF8Q6P2Q9 PKD1-204ENST00000468674 490 ntTSL 514.37□□□□□ -0.113e-13■■□□□ 11.4
PRPF8Q6P2Q9 MYB-207ENST00000430686 1036 ntTSL 54.61□□□□□ -1.674e-8■■□□□ 11.4
PRPF8Q6P2Q9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.362e-7■■□□□ 11.4
PRPF8Q6P2Q9 DNMT3A-209ENST00000470983 589 ntTSL 312.73□□□□□ -0.374e-8■■□□□ 11.4
PRPF8Q6P2Q9 ETV4-210ENST00000590236 616 ntTSL 313.48□□□□□ -0.259e-8■■□□□ 11.4
PRPF8Q6P2Q9 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC10.82□□□□□ -0.681e-6■■□□□ 11.4
PRPF8Q6P2Q9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.731e-6■■□□□ 11.4
PRPF8Q6P2Q9 PRR3-206ENST00000498336 2005 ntTSL 310.11□□□□□ -0.791e-6■■□□□ 11.4
PRPF8Q6P2Q9 PRR3-204ENST00000481741 1944 ntTSL 28.91□□□□□ -0.981e-6■■□□□ 11.4
PRPF8Q6P2Q9 DXO-212ENST00000491327 1395 ntTSL 514.08□□□□□ -0.165e-11■■□□□ 11.4
PRPF8Q6P2Q9 DXO-215ENST00000498357 1625 ntTSL 1 (best)13.97□□□□□ -0.175e-11■■□□□ 11.4
PRPF8Q6P2Q9 DXO-214ENST00000495340 586 ntTSL 57.75□□□□□ -1.175e-11■■□□□ 11.4
PRPF8Q6P2Q9 CCDC130-206ENST00000587019 756 ntTSL 314.52□□□□□ -0.091e-10■■□□□ 11.4
PRPF8Q6P2Q9 CCDC130-203ENST00000585844 887 ntTSL 314.07□□□□□ -0.161e-10■■□□□ 11.4
PRPF8Q6P2Q9 TRAPPC2L-203ENST00000562125 722 ntTSL 210.95□□□□□ -0.662e-11■■□□□ 11.4
PRPF8Q6P2Q9 TRAPPC2L-205ENST00000563514 419 ntTSL 210.95□□□□□ -0.662e-11■■□□□ 11.4
PRPF8Q6P2Q9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.76□□□□□ -0.213e-7■■□□□ 11.4
PRPF8Q6P2Q9 LRRC61-204ENST00000471872 653 ntTSL 412.04□□□□□ -0.483e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.813e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.833e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC6.11□□□□□ -1.433e-7■■□□□ 11.4
PRPF8Q6P2Q9 FUS-213ENST00000570090 544 ntTSL 216.11■□□□□ 0.176e-15■■□□□ 11.4
PRPF8Q6P2Q9 PKDCC-207ENST00000485578 563 ntTSL 211.93□□□□□ -0.55e-15■■□□□ 11.4
PRPF8Q6P2Q9 PACSIN2-206ENST00000418133 622 ntTSL 511.41□□□□□ -0.582e-7■■□□□ 11.4
Retrieved 100 of 73,762 protein–RNA pairs in 981.4 ms