RNA–Protein interactions for RNA: ENST00000471872.1

LRRC61-204, Transcript of leucine rich repeat containing 61, humanhuman

TSL 4

Gene LRRC61, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC61-204ENST00000471872 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
LRRC61-204ENST00000471872 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.52
LRRC61-204ENST00000471872 ABCC9O60706 1549 aa29.59■■■□□ 2.33
LRRC61-204ENST00000471872 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
LRRC61-204ENST00000471872 NACADO15069 1562 aa28.74■■■□□ 2.19
LRRC61-204ENST00000471872 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
LRRC61-204ENST00000471872 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
LRRC61-204ENST00000471872 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
LRRC61-204ENST00000471872 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
LRRC61-204ENST00000471872 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
LRRC61-204ENST00000471872 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
LRRC61-204ENST00000471872 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
LRRC61-204ENST00000471872 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
LRRC61-204ENST00000471872 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
LRRC61-204ENST00000471872 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
LRRC61-204ENST00000471872 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
LRRC61-204ENST00000471872 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
LRRC61-204ENST00000471872 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
LRRC61-204ENST00000471872 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
LRRC61-204ENST00000471872 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
LRRC61-204ENST00000471872 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
LRRC61-204ENST00000471872 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
LRRC61-204ENST00000471872 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
LRRC61-204ENST00000471872 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
LRRC61-204ENST00000471872 WIZO95785 1651 aa26.43■■□□□ 1.82
LRRC61-204ENST00000471872 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
LRRC61-204ENST00000471872 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
LRRC61-204ENST00000471872 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
LRRC61-204ENST00000471872 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
LRRC61-204ENST00000471872 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
LRRC61-204ENST00000471872 SUPT5HO00267 1087 aaKnown RBP25.87■■□□□ 1.73
LRRC61-204ENST00000471872 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
LRRC61-204ENST00000471872 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
LRRC61-204ENST00000471872 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
LRRC61-204ENST00000471872 NESP48681 1621 aa25.7■■□□□ 1.7
LRRC61-204ENST00000471872 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
LRRC61-204ENST00000471872 CFTRP13569 1480 aa25.6■■□□□ 1.69
LRRC61-204ENST00000471872 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
LRRC61-204ENST00000471872 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
LRRC61-204ENST00000471872 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
LRRC61-204ENST00000471872 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
LRRC61-204ENST00000471872 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
LRRC61-204ENST00000471872 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
LRRC61-204ENST00000471872 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
LRRC61-204ENST00000471872 WDR62O43379 1518 aa25.21■■□□□ 1.63
LRRC61-204ENST00000471872 CUX2O14529 1486 aa25.17■■□□□ 1.62
LRRC61-204ENST00000471872 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
LRRC61-204ENST00000471872 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
LRRC61-204ENST00000471872 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
LRRC61-204ENST00000471872 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
LRRC61-204ENST00000471872 CUX1P39880 1505 aa24.96■■□□□ 1.59
LRRC61-204ENST00000471872 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
LRRC61-204ENST00000471872 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
LRRC61-204ENST00000471872 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
LRRC61-204ENST00000471872 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
LRRC61-204ENST00000471872 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
LRRC61-204ENST00000471872 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
LRRC61-204ENST00000471872 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
LRRC61-204ENST00000471872 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
LRRC61-204ENST00000471872 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
LRRC61-204ENST00000471872 SOGA1O94964 1423 aa24.7■■□□□ 1.55
LRRC61-204ENST00000471872 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
LRRC61-204ENST00000471872 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
LRRC61-204ENST00000471872 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
LRRC61-204ENST00000471872 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
LRRC61-204ENST00000471872 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
LRRC61-204ENST00000471872 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
LRRC61-204ENST00000471872 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.519e-7■■■■□ 21
LRRC61-204ENST00000471872 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
LRRC61-204ENST00000471872 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
LRRC61-204ENST00000471872 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
LRRC61-204ENST00000471872 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
LRRC61-204ENST00000471872 CHD1O14646 1710 aa24.37■■□□□ 1.49
LRRC61-204ENST00000471872 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
LRRC61-204ENST00000471872 MAGI1Q96QZ7 1491 aaPredicted RBP24.36■■□□□ 1.49
LRRC61-204ENST00000471872 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
LRRC61-204ENST00000471872 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
LRRC61-204ENST00000471872 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
LRRC61-204ENST00000471872 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
LRRC61-204ENST00000471872 CUL7Q14999 1698 aa24.28■■□□□ 1.48
LRRC61-204ENST00000471872 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
LRRC61-204ENST00000471872 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
LRRC61-204ENST00000471872 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
LRRC61-204ENST00000471872 IGF1RP08069 1367 aa24.14■■□□□ 1.45
LRRC61-204ENST00000471872 EEA1Q15075 1411 aa24.13■■□□□ 1.45
LRRC61-204ENST00000471872 FBLN2P98095 1184 aa24.12■■□□□ 1.45
LRRC61-204ENST00000471872 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
LRRC61-204ENST00000471872 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
LRRC61-204ENST00000471872 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
LRRC61-204ENST00000471872 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
LRRC61-204ENST00000471872 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
LRRC61-204ENST00000471872 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
LRRC61-204ENST00000471872 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
LRRC61-204ENST00000471872 NUP160Q12769 1436 aa23.98■■□□□ 1.43
LRRC61-204ENST00000471872 PRXQ9BXM0 1461 aa23.95■■□□□ 1.42
LRRC61-204ENST00000471872 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.42
LRRC61-204ENST00000471872 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
LRRC61-204ENST00000471872 KIF21BO75037 1637 aa23.92■■□□□ 1.42
LRRC61-204ENST00000471872 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
LRRC61-204ENST00000471872 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms