RNA–Protein interactions for RNA: ENST00000585844.1

CCDC130-203, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-203ENST00000585844 NISCHQ9Y2I1 1504 aa40.66■■■■■ 4.1
CCDC130-203ENST00000585844 ABCC9O60706 1549 aa37.02■■■■□ 3.52
CCDC130-203ENST00000585844 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
CCDC130-203ENST00000585844 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
CCDC130-203ENST00000585844 DNAJC5BQ9UF47 199 aa35.06■■■■□ 3.2
CCDC130-203ENST00000585844 NACADO15069 1562 aa34.77■■■■□ 3.16
CCDC130-203ENST00000585844 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
CCDC130-203ENST00000585844 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
CCDC130-203ENST00000585844 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
CCDC130-203ENST00000585844 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
CCDC130-203ENST00000585844 BICRAQ9NZM4 1560 aa34.07■■■■□ 3.05
CCDC130-203ENST00000585844 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
CCDC130-203ENST00000585844 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
CCDC130-203ENST00000585844 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
CCDC130-203ENST00000585844 CC2D2AQ9P2K1 1620 aa33.44■■■□□ 2.94
CCDC130-203ENST00000585844 CECR2Q9BXF3 1484 aa33.41■■■□□ 2.94
CCDC130-203ENST00000585844 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
CCDC130-203ENST00000585844 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
CCDC130-203ENST00000585844 DNAJC5Q9H3Z4 198 aa32.52■■■□□ 2.8
CCDC130-203ENST00000585844 CUX2O14529 1486 aa32.1■■■□□ 2.73
CCDC130-203ENST00000585844 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
CCDC130-203ENST00000585844 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
CCDC130-203ENST00000585844 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
CCDC130-203ENST00000585844 SMARCA2P51531 1590 aa31.84■■■□□ 2.69
CCDC130-203ENST00000585844 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
CCDC130-203ENST00000585844 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
CCDC130-203ENST00000585844 NESP48681 1621 aa31.68■■■□□ 2.66
CCDC130-203ENST00000585844 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
CCDC130-203ENST00000585844 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
CCDC130-203ENST00000585844 PEG3Q9GZU2 1588 aa31.52■■■□□ 2.64
CCDC130-203ENST00000585844 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
CCDC130-203ENST00000585844 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
CCDC130-203ENST00000585844 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
CCDC130-203ENST00000585844 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
CCDC130-203ENST00000585844 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
CCDC130-203ENST00000585844 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
CCDC130-203ENST00000585844 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.56
CCDC130-203ENST00000585844 WDR62O43379 1518 aa30.96■■■□□ 2.55
CCDC130-203ENST00000585844 WIZO95785 1651 aa30.92■■■□□ 2.54
CCDC130-203ENST00000585844 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
CCDC130-203ENST00000585844 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
CCDC130-203ENST00000585844 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
CCDC130-203ENST00000585844 CFTRP13569 1480 aa30.67■■■□□ 2.5
CCDC130-203ENST00000585844 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
CCDC130-203ENST00000585844 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
CCDC130-203ENST00000585844 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
CCDC130-203ENST00000585844 URB2Q14146 1524 aaKnown RBP30.5■■■□□ 2.47
CCDC130-203ENST00000585844 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
CCDC130-203ENST00000585844 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
CCDC130-203ENST00000585844 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
CCDC130-203ENST00000585844 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
CCDC130-203ENST00000585844 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
CCDC130-203ENST00000585844 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
CCDC130-203ENST00000585844 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
CCDC130-203ENST00000585844 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
CCDC130-203ENST00000585844 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
CCDC130-203ENST00000585844 ABCC8Q09428 1581 aa30.06■■■□□ 2.4
CCDC130-203ENST00000585844 EIF4G3O43432 1585 aaKnown RBP30.02■■■□□ 2.4
CCDC130-203ENST00000585844 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
CCDC130-203ENST00000585844 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
CCDC130-203ENST00000585844 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.373e-6■■■■□ 20.5
CCDC130-203ENST00000585844 CHD1O14646 1710 aa29.86■■■□□ 2.37
CCDC130-203ENST00000585844 CYB5RLQ6IPT4 315 aa29.86■■■□□ 2.37
CCDC130-203ENST00000585844 POLA1P09884 1462 aaPredicted RBP29.78■■■□□ 2.36
CCDC130-203ENST00000585844 FBLN2P98095 1184 aa29.75■■■□□ 2.35
CCDC130-203ENST00000585844 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
CCDC130-203ENST00000585844 TRHP20396 242 aaPredicted RBP29.66■■■□□ 2.34
CCDC130-203ENST00000585844 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
CCDC130-203ENST00000585844 SOGA1O94964 1423 aa29.63■■■□□ 2.33
CCDC130-203ENST00000585844 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
CCDC130-203ENST00000585844 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
CCDC130-203ENST00000585844 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
CCDC130-203ENST00000585844 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
CCDC130-203ENST00000585844 CLASP1Q7Z460 1538 aa29.52■■■□□ 2.32
CCDC130-203ENST00000585844 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
CCDC130-203ENST00000585844 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
CCDC130-203ENST00000585844 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
CCDC130-203ENST00000585844 CUX1P39880 1505 aa29.44■■■□□ 2.3
CCDC130-203ENST00000585844 GRIN2BQ13224 1484 aa29.43■■■□□ 2.3
CCDC130-203ENST00000585844 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
CCDC130-203ENST00000585844 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
CCDC130-203ENST00000585844 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
CCDC130-203ENST00000585844 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
CCDC130-203ENST00000585844 ABCA5Q8WWZ7 1642 aa29.18■■■□□ 2.26
CCDC130-203ENST00000585844 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
CCDC130-203ENST00000585844 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
CCDC130-203ENST00000585844 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.23
CCDC130-203ENST00000585844 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
CCDC130-203ENST00000585844 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
CCDC130-203ENST00000585844 NUP160Q12769 1436 aa28.97■■■□□ 2.23
CCDC130-203ENST00000585844 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
CCDC130-203ENST00000585844 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
CCDC130-203ENST00000585844 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
CCDC130-203ENST00000585844 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.22
CCDC130-203ENST00000585844 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
CCDC130-203ENST00000585844 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
CCDC130-203ENST00000585844 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
CCDC130-203ENST00000585844 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
CCDC130-203ENST00000585844 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
CCDC130-203ENST00000585844 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms