RNA–Protein interactions for RNA: ENST00000586619.1

VASP-203, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 2

Gene VASP, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-203ENST00000586619 NISCHQ9Y2I1 1504 aa47.28■■■■■ 5.16
VASP-203ENST00000586619 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
VASP-203ENST00000586619 ABCC9O60706 1549 aa42.06■■■■■ 4.32
VASP-203ENST00000586619 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
VASP-203ENST00000586619 NACADO15069 1562 aa39.93■■■■□ 3.98
VASP-203ENST00000586619 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
VASP-203ENST00000586619 MYO15BQ96JP2 1530 aa39.5■■■■□ 3.91
VASP-203ENST00000586619 DNAJC5BQ9UF47 199 aa39.32■■■■□ 3.89
VASP-203ENST00000586619 UNC13AQ9UPW8 1703 aa39.29■■■■□ 3.88
VASP-203ENST00000586619 ZCCHC6Q5VYS8 1495 aaKnown RBP39.24■■■■□ 3.87
VASP-203ENST00000586619 PABPN1Q86U42 306 aaKnown RBP eCLIP39.19■■■■□ 3.86
VASP-203ENST00000586619 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
VASP-203ENST00000586619 BICRAQ9NZM4 1560 aa39.04■■■■□ 3.84
VASP-203ENST00000586619 SCRIBQ14160 1630 aa38.54■■■■□ 3.76
VASP-203ENST00000586619 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
VASP-203ENST00000586619 CC2D2AQ9P2K1 1620 aa38.03■■■■□ 3.68
VASP-203ENST00000586619 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.67
VASP-203ENST00000586619 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
VASP-203ENST00000586619 NCAPD3P42695 1498 aa36.89■■■■□ 3.5
VASP-203ENST00000586619 SMARCA4P51532 1647 aa36.82■■■■□ 3.49
VASP-203ENST00000586619 ATAD2BQ9ULI0 1458 aa36.81■■■■□ 3.48
VASP-203ENST00000586619 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
VASP-203ENST00000586619 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
VASP-203ENST00000586619 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
VASP-203ENST00000586619 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
VASP-203ENST00000586619 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
VASP-203ENST00000586619 BAZ1BQ9UIG0 1483 aaKnown RBP36.42■■■■□ 3.42
VASP-203ENST00000586619 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
VASP-203ENST00000586619 NESP48681 1621 aa36.23■■■■□ 3.39
VASP-203ENST00000586619 CUX2O14529 1486 aa36.16■■■■□ 3.38
VASP-203ENST00000586619 WIZO95785 1651 aa36.01■■■■□ 3.36
VASP-203ENST00000586619 LAMC3Q9Y6N6 1575 aa36■■■■□ 3.35
VASP-203ENST00000586619 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
VASP-203ENST00000586619 THOC2Q8NI27 1593 aaKnown RBP35.83■■■■□ 3.33
VASP-203ENST00000586619 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
VASP-203ENST00000586619 KIF21AQ7Z4S6 1674 aa35.76■■■■□ 3.32
VASP-203ENST00000586619 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.31
VASP-203ENST00000586619 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
VASP-203ENST00000586619 TOP2AP11388 1531 aaKnown RBP35.56■■■■□ 3.28
VASP-203ENST00000586619 MRC2Q9UBG0 1479 aa35.45■■■■□ 3.27
VASP-203ENST00000586619 CFTRP13569 1480 aa35.41■■■■□ 3.26
VASP-203ENST00000586619 WDR62O43379 1518 aa35.37■■■■□ 3.25
VASP-203ENST00000586619 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
VASP-203ENST00000586619 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
VASP-203ENST00000586619 CCDC88BA6NC98 1476 aa35.16■■■■□ 3.22
VASP-203ENST00000586619 URB2Q14146 1524 aaKnown RBP35.07■■■■□ 3.21
VASP-203ENST00000586619 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
VASP-203ENST00000586619 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
VASP-203ENST00000586619 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
VASP-203ENST00000586619 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
VASP-203ENST00000586619 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
VASP-203ENST00000586619 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
VASP-203ENST00000586619 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
VASP-203ENST00000586619 TARBP1Q13395 1621 aaKnown RBP34.42■■■■□ 3.1
VASP-203ENST00000586619 EIF4G3O43432 1585 aaKnown RBP34.4■■■■□ 3.1
VASP-203ENST00000586619 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
VASP-203ENST00000586619 TRIM41Q8WV44 630 aa34.34■■■■□ 3.09
VASP-203ENST00000586619 AQRO60306 1485 aaKnown RBP eCLIP34.29■■■■□ 3.088e-8■■■■■ 51.6
VASP-203ENST00000586619 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
VASP-203ENST00000586619 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
VASP-203ENST00000586619 CUX1P39880 1505 aa34.23■■■■□ 3.07
VASP-203ENST00000586619 SOGA1O94964 1423 aa34.21■■■■□ 3.07
VASP-203ENST00000586619 FGD5Q6ZNL6 1462 aa34.19■■■■□ 3.06
VASP-203ENST00000586619 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
VASP-203ENST00000586619 CHD1O14646 1710 aa34.1■■■■□ 3.05
VASP-203ENST00000586619 RIMBP3CA6NJZ7 1639 aa34.09■■■■□ 3.05
VASP-203ENST00000586619 RIMBP3BA6NNM3 1639 aa34.09■■■■□ 3.05
VASP-203ENST00000586619 RIMBP3Q9UFD9 1639 aa34.09■■■■□ 3.05
VASP-203ENST00000586619 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
VASP-203ENST00000586619 ARHGEF11O15085 1522 aa34■■■■□ 3.03
VASP-203ENST00000586619 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
VASP-203ENST00000586619 FBLN2P98095 1184 aa33.94■■■■□ 3.02
VASP-203ENST00000586619 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
VASP-203ENST00000586619 MAGI1Q96QZ7 1491 aaPredicted RBP33.85■■■■□ 3.01
VASP-203ENST00000586619 ABCA10Q8WWZ4 1543 aa33.83■■■■□ 3.01
VASP-203ENST00000586619 GAPVD1Q14C86 1478 aa33.79■■■■□ 3
VASP-203ENST00000586619 PBRM1Q86U86 1689 aa33.77■■■■□ 3
VASP-203ENST00000586619 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
VASP-203ENST00000586619 CHMP7Q8WUX9 453 aaPredicted RBP33.75■■■□□ 2.99
VASP-203ENST00000586619 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
VASP-203ENST00000586619 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
VASP-203ENST00000586619 SYNJ2O15056 1496 aa33.74■■■□□ 2.99
VASP-203ENST00000586619 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
VASP-203ENST00000586619 SYNJ1O43426 1573 aa33.7■■■□□ 2.99
VASP-203ENST00000586619 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
VASP-203ENST00000586619 ARAP1Q96P48 1450 aa33.69■■■□□ 2.98
VASP-203ENST00000586619 CYB5RLQ6IPT4 315 aa33.69■■■□□ 2.98
VASP-203ENST00000586619 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
VASP-203ENST00000586619 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
VASP-203ENST00000586619 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
VASP-203ENST00000586619 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
VASP-203ENST00000586619 NUP160Q12769 1436 aa33.36■■■□□ 2.93
VASP-203ENST00000586619 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
VASP-203ENST00000586619 ERCC6L2Q5T890 1561 aa33.25■■■□□ 2.91
VASP-203ENST00000586619 TRHP20396 242 aaPredicted RBP33.19■■■□□ 2.9
VASP-203ENST00000586619 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
VASP-203ENST00000586619 IGF1RP08069 1367 aa33.05■■■□□ 2.88
VASP-203ENST00000586619 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
VASP-203ENST00000586619 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
VASP-203ENST00000586619 PRG4Q92954 1404 aaPredicted RBP32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms