RNA–Protein interactions for RNA: ENST00000257899.3

AC009779.3-203, humanhuman

TSL 5

Gene AC009779.3, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009779.3-203ENST00000257899 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
AC009779.3-203ENST00000257899 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
AC009779.3-203ENST00000257899 ABCC9O60706 1549 aa24.81■■□□□ 1.56
AC009779.3-203ENST00000257899 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
AC009779.3-203ENST00000257899 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
AC009779.3-203ENST00000257899 NACADO15069 1562 aa23.53■■□□□ 1.36
AC009779.3-203ENST00000257899 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
AC009779.3-203ENST00000257899 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
AC009779.3-203ENST00000257899 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
AC009779.3-203ENST00000257899 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
AC009779.3-203ENST00000257899 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
AC009779.3-203ENST00000257899 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
AC009779.3-203ENST00000257899 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
AC009779.3-203ENST00000257899 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
AC009779.3-203ENST00000257899 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
AC009779.3-203ENST00000257899 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
AC009779.3-203ENST00000257899 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.18
AC009779.3-203ENST00000257899 CECR2Q9BXF3 1484 aa22.31■■□□□ 1.16
AC009779.3-203ENST00000257899 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
AC009779.3-203ENST00000257899 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
AC009779.3-203ENST00000257899 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
AC009779.3-203ENST00000257899 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
AC009779.3-203ENST00000257899 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
AC009779.3-203ENST00000257899 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
AC009779.3-203ENST00000257899 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
AC009779.3-203ENST00000257899 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
AC009779.3-203ENST00000257899 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
AC009779.3-203ENST00000257899 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
AC009779.3-203ENST00000257899 NESP48681 1621 aa21.32■■□□□ 1
AC009779.3-203ENST00000257899 CUX2O14529 1486 aa21.28■■□□□ 1
AC009779.3-203ENST00000257899 WIZO95785 1651 aa21.27■■□□□ 1
AC009779.3-203ENST00000257899 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
AC009779.3-203ENST00000257899 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
AC009779.3-203ENST00000257899 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
AC009779.3-203ENST00000257899 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
AC009779.3-203ENST00000257899 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
AC009779.3-203ENST00000257899 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
AC009779.3-203ENST00000257899 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
AC009779.3-203ENST00000257899 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
AC009779.3-203ENST00000257899 MRC2Q9UBG0 1479 aa20.92■□□□□ 0.94
AC009779.3-203ENST00000257899 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
AC009779.3-203ENST00000257899 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
AC009779.3-203ENST00000257899 WDR62O43379 1518 aa20.83■□□□□ 0.93
AC009779.3-203ENST00000257899 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
AC009779.3-203ENST00000257899 CFTRP13569 1480 aa20.81■□□□□ 0.92
AC009779.3-203ENST00000257899 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
AC009779.3-203ENST00000257899 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
AC009779.3-203ENST00000257899 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
AC009779.3-203ENST00000257899 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
AC009779.3-203ENST00000257899 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
AC009779.3-203ENST00000257899 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
AC009779.3-203ENST00000257899 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
AC009779.3-203ENST00000257899 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
AC009779.3-203ENST00000257899 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
AC009779.3-203ENST00000257899 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
AC009779.3-203ENST00000257899 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
AC009779.3-203ENST00000257899 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
AC009779.3-203ENST00000257899 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
AC009779.3-203ENST00000257899 CHD1O14646 1710 aa20.2■□□□□ 0.82
AC009779.3-203ENST00000257899 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.822e-8■■■■■ 31.5
AC009779.3-203ENST00000257899 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
AC009779.3-203ENST00000257899 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
AC009779.3-203ENST00000257899 SOGA1O94964 1423 aa20.17■□□□□ 0.82
AC009779.3-203ENST00000257899 CUX1P39880 1505 aa20.17■□□□□ 0.82
AC009779.3-203ENST00000257899 FBLN2P98095 1184 aa20.14■□□□□ 0.81
AC009779.3-203ENST00000257899 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
AC009779.3-203ENST00000257899 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
AC009779.3-203ENST00000257899 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
AC009779.3-203ENST00000257899 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
AC009779.3-203ENST00000257899 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
AC009779.3-203ENST00000257899 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
AC009779.3-203ENST00000257899 PBRM1Q86U86 1689 aa20.04■□□□□ 0.8
AC009779.3-203ENST00000257899 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
AC009779.3-203ENST00000257899 GRIN2BQ13224 1484 aa20■□□□□ 0.79
AC009779.3-203ENST00000257899 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
AC009779.3-203ENST00000257899 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
AC009779.3-203ENST00000257899 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
AC009779.3-203ENST00000257899 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
AC009779.3-203ENST00000257899 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
AC009779.3-203ENST00000257899 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
AC009779.3-203ENST00000257899 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
AC009779.3-203ENST00000257899 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
AC009779.3-203ENST00000257899 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
AC009779.3-203ENST00000257899 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
AC009779.3-203ENST00000257899 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
AC009779.3-203ENST00000257899 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
AC009779.3-203ENST00000257899 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
AC009779.3-203ENST00000257899 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
AC009779.3-203ENST00000257899 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
AC009779.3-203ENST00000257899 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
AC009779.3-203ENST00000257899 TRHP20396 242 aaPredicted RBP19.69■□□□□ 0.74
AC009779.3-203ENST00000257899 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
AC009779.3-203ENST00000257899 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
AC009779.3-203ENST00000257899 NUP160Q12769 1436 aa19.6■□□□□ 0.73
AC009779.3-203ENST00000257899 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
AC009779.3-203ENST00000257899 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
AC009779.3-203ENST00000257899 CUL7Q14999 1698 aa19.54■□□□□ 0.72
AC009779.3-203ENST00000257899 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
AC009779.3-203ENST00000257899 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
AC009779.3-203ENST00000257899 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms