RNA–Protein interactions for RNA: ENST00000553100.1

BLOC1S1-206, Transcript of biogenesis of lysosomal organelles complex 1 subunit 1, humanhuman

TSL 2

Gene BLOC1S1, Length 421 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S1-206ENST00000553100 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
BLOC1S1-206ENST00000553100 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
BLOC1S1-206ENST00000553100 ABCC9O60706 1549 aa20.95■□□□□ 0.94
BLOC1S1-206ENST00000553100 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
BLOC1S1-206ENST00000553100 NACADO15069 1562 aa20.09■□□□□ 0.81
BLOC1S1-206ENST00000553100 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
BLOC1S1-206ENST00000553100 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
BLOC1S1-206ENST00000553100 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
BLOC1S1-206ENST00000553100 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
BLOC1S1-206ENST00000553100 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
BLOC1S1-206ENST00000553100 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
BLOC1S1-206ENST00000553100 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
BLOC1S1-206ENST00000553100 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
BLOC1S1-206ENST00000553100 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
BLOC1S1-206ENST00000553100 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
BLOC1S1-206ENST00000553100 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
BLOC1S1-206ENST00000553100 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
BLOC1S1-206ENST00000553100 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
BLOC1S1-206ENST00000553100 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
BLOC1S1-206ENST00000553100 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
BLOC1S1-206ENST00000553100 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
BLOC1S1-206ENST00000553100 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
BLOC1S1-206ENST00000553100 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
BLOC1S1-206ENST00000553100 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
BLOC1S1-206ENST00000553100 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
BLOC1S1-206ENST00000553100 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
BLOC1S1-206ENST00000553100 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
BLOC1S1-206ENST00000553100 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
BLOC1S1-206ENST00000553100 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
BLOC1S1-206ENST00000553100 WIZO95785 1651 aa18.09■□□□□ 0.49
BLOC1S1-206ENST00000553100 CUX2O14529 1486 aa18.07■□□□□ 0.48
BLOC1S1-206ENST00000553100 NESP48681 1621 aa18.06■□□□□ 0.48
BLOC1S1-206ENST00000553100 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
BLOC1S1-206ENST00000553100 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
BLOC1S1-206ENST00000553100 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
BLOC1S1-206ENST00000553100 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
BLOC1S1-206ENST00000553100 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
BLOC1S1-206ENST00000553100 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
BLOC1S1-206ENST00000553100 CFTRP13569 1480 aa17.82■□□□□ 0.44
BLOC1S1-206ENST00000553100 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
BLOC1S1-206ENST00000553100 WDR62O43379 1518 aa17.75■□□□□ 0.43
BLOC1S1-206ENST00000553100 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
BLOC1S1-206ENST00000553100 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
BLOC1S1-206ENST00000553100 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
BLOC1S1-206ENST00000553100 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
BLOC1S1-206ENST00000553100 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
BLOC1S1-206ENST00000553100 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
BLOC1S1-206ENST00000553100 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
BLOC1S1-206ENST00000553100 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
BLOC1S1-206ENST00000553100 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
BLOC1S1-206ENST00000553100 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
BLOC1S1-206ENST00000553100 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
BLOC1S1-206ENST00000553100 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
BLOC1S1-206ENST00000553100 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
BLOC1S1-206ENST00000553100 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
BLOC1S1-206ENST00000553100 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
BLOC1S1-206ENST00000553100 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
BLOC1S1-206ENST00000553100 CUX1P39880 1505 aa17.21■□□□□ 0.34
BLOC1S1-206ENST00000553100 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
BLOC1S1-206ENST00000553100 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
BLOC1S1-206ENST00000553100 SOGA1O94964 1423 aa17.16■□□□□ 0.34
BLOC1S1-206ENST00000553100 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.332e-8■■■■■ 31.5
BLOC1S1-206ENST00000553100 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
BLOC1S1-206ENST00000553100 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
BLOC1S1-206ENST00000553100 CHD1O14646 1710 aa17.04■□□□□ 0.32
BLOC1S1-206ENST00000553100 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
BLOC1S1-206ENST00000553100 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
BLOC1S1-206ENST00000553100 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
BLOC1S1-206ENST00000553100 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
BLOC1S1-206ENST00000553100 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
BLOC1S1-206ENST00000553100 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
BLOC1S1-206ENST00000553100 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
BLOC1S1-206ENST00000553100 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
BLOC1S1-206ENST00000553100 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
BLOC1S1-206ENST00000553100 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
BLOC1S1-206ENST00000553100 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
BLOC1S1-206ENST00000553100 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
BLOC1S1-206ENST00000553100 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
BLOC1S1-206ENST00000553100 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
BLOC1S1-206ENST00000553100 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
BLOC1S1-206ENST00000553100 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
BLOC1S1-206ENST00000553100 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
BLOC1S1-206ENST00000553100 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
BLOC1S1-206ENST00000553100 FBLN2P98095 1184 aa16.91■□□□□ 0.3
BLOC1S1-206ENST00000553100 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
BLOC1S1-206ENST00000553100 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
BLOC1S1-206ENST00000553100 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
BLOC1S1-206ENST00000553100 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
BLOC1S1-206ENST00000553100 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
BLOC1S1-206ENST00000553100 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
BLOC1S1-206ENST00000553100 NUP160Q12769 1436 aa16.76■□□□□ 0.27
BLOC1S1-206ENST00000553100 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
BLOC1S1-206ENST00000553100 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
BLOC1S1-206ENST00000553100 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
BLOC1S1-206ENST00000553100 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
BLOC1S1-206ENST00000553100 CUL7Q14999 1698 aa16.65■□□□□ 0.26
BLOC1S1-206ENST00000553100 IGF1RP08069 1367 aa16.62■□□□□ 0.25
BLOC1S1-206ENST00000553100 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
BLOC1S1-206ENST00000553100 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
BLOC1S1-206ENST00000553100 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 324.2 ms