RNA–Protein interactions for RNA: ENST00000561139.1

B2M-211, Transcript of beta-2-microglobulin, humanhuman

TSL 3

Gene B2M, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B2M-211ENST00000561139 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
B2M-211ENST00000561139 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
B2M-211ENST00000561139 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
B2M-211ENST00000561139 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
B2M-211ENST00000561139 FOXD1Q16676 465 aa23.73■■□□□ 1.39
B2M-211ENST00000561139 POTEDQ86YR6 584 aa22.95■■□□□ 1.26
B2M-211ENST00000561139 MSH5O43196 834 aa22.34■■□□□ 1.17
B2M-211ENST00000561139 PIAS4Q8N2W9 510 aaPredicted RBP21.94■■□□□ 1.1
B2M-211ENST00000561139 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
B2M-211ENST00000561139 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
B2M-211ENST00000561139 ADRA2BP18089 450 aa21.6■■□□□ 1.05
B2M-211ENST00000561139 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
B2M-211ENST00000561139 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
B2M-211ENST00000561139 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
B2M-211ENST00000561139 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
B2M-211ENST00000561139 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
B2M-211ENST00000561139 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
B2M-211ENST00000561139 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
B2M-211ENST00000561139 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
B2M-211ENST00000561139 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
B2M-211ENST00000561139 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
B2M-211ENST00000561139 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
B2M-211ENST00000561139 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
B2M-211ENST00000561139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
B2M-211ENST00000561139 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
B2M-211ENST00000561139 POTEHQ6S545 545 aa17.82■□□□□ 0.44
B2M-211ENST00000561139 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
B2M-211ENST00000561139 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
B2M-211ENST00000561139 DSG3P32926 999 aa17.66■□□□□ 0.42
B2M-211ENST00000561139 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
B2M-211ENST00000561139 CAPN15O75808 1086 aa17.52■□□□□ 0.4
B2M-211ENST00000561139 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
B2M-211ENST00000561139 ABCB7O75027 752 aa17.11■□□□□ 0.33
B2M-211ENST00000561139 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
B2M-211ENST00000561139 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
B2M-211ENST00000561139 APLP2Q06481 763 aa16.95■□□□□ 0.3
B2M-211ENST00000561139 KCNA4P22459 653 aa16.9■□□□□ 0.3
B2M-211ENST00000561139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
B2M-211ENST00000561139 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
B2M-211ENST00000561139 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
B2M-211ENST00000561139 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
B2M-211ENST00000561139 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
B2M-211ENST00000561139 POLA2Q14181 598 aa16.53■□□□□ 0.24
B2M-211ENST00000561139 SP7Q8TDD2 431 aaPredicted RBP16.41■□□□□ 0.22
B2M-211ENST00000561139 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
B2M-211ENST00000561139 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
B2M-211ENST00000561139 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
B2M-211ENST00000561139 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
B2M-211ENST00000561139 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
B2M-211ENST00000561139 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
B2M-211ENST00000561139 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
B2M-211ENST00000561139 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
B2M-211ENST00000561139 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
B2M-211ENST00000561139 HAX1O00165 279 aa15.99■□□□□ 0.15
B2M-211ENST00000561139 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
B2M-211ENST00000561139 EVX2Q03828 476 aa15.9■□□□□ 0.14
B2M-211ENST00000561139 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
B2M-211ENST00000561139 ZBTB22O15209 634 aa15.59■□□□□ 0.09
B2M-211ENST00000561139 SPDYE2BA6NHP3 402 aa15.58■□□□□ 0.08
B2M-211ENST00000561139 SPDYE6P0CI01 402 aa15.58■□□□□ 0.08
B2M-211ENST00000561139 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
B2M-211ENST00000561139 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
B2M-211ENST00000561139 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
B2M-211ENST00000561139 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
B2M-211ENST00000561139 GABBR2O75899 941 aa15.44■□□□□ 0.06
B2M-211ENST00000561139 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
B2M-211ENST00000561139 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
B2M-211ENST00000561139 FBLN2P98095 1184 aa15.41■□□□□ 0.06
B2M-211ENST00000561139 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
B2M-211ENST00000561139 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
B2M-211ENST00000561139 LHX8Q68G74 356 aa15.37■□□□□ 0.05
B2M-211ENST00000561139 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
B2M-211ENST00000561139 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
B2M-211ENST00000561139 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
B2M-211ENST00000561139 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
B2M-211ENST00000561139 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
B2M-211ENST00000561139 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
B2M-211ENST00000561139 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
B2M-211ENST00000561139 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
B2M-211ENST00000561139 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
B2M-211ENST00000561139 CLCN6P51797 869 aa14.89□□□□□ -0.03
B2M-211ENST00000561139 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
B2M-211ENST00000561139 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
B2M-211ENST00000561139 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
B2M-211ENST00000561139 OTUD5Q96G74 571 aa14.7□□□□□ -0.06
B2M-211ENST00000561139 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
B2M-211ENST00000561139 GALR2O43603 387 aaPredicted RBP14.68□□□□□ -0.06
B2M-211ENST00000561139 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
B2M-211ENST00000561139 CREBZFQ9NS37 354 aa14.67□□□□□ -0.06
B2M-211ENST00000561139 POTEMA6NI47 508 aa14.5□□□□□ -0.09
B2M-211ENST00000561139 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
B2M-211ENST00000561139 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
B2M-211ENST00000561139 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
B2M-211ENST00000561139 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
B2M-211ENST00000561139 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
B2M-211ENST00000561139 POTEJP0CG39 1038 aa14.38□□□□□ -0.11
B2M-211ENST00000561139 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
B2M-211ENST00000561139 ASTLQ6HA08 431 aaPredicted RBP14.33□□□□□ -0.12
B2M-211ENST00000561139 METRNQ9UJH8 293 aa14.3□□□□□ -0.12
B2M-211ENST00000561139 ATMINO43313 823 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms