RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
PKDCC-207ENST00000485578 ABCC9O60706 1549 aa30.66■■■□□ 2.5
PKDCC-207ENST00000485578 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
PKDCC-207ENST00000485578 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
PKDCC-207ENST00000485578 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
PKDCC-207ENST00000485578 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
PKDCC-207ENST00000485578 NACADO15069 1562 aa28.75■■■□□ 2.19
PKDCC-207ENST00000485578 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
PKDCC-207ENST00000485578 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
PKDCC-207ENST00000485578 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
PKDCC-207ENST00000485578 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
PKDCC-207ENST00000485578 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
PKDCC-207ENST00000485578 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
PKDCC-207ENST00000485578 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
PKDCC-207ENST00000485578 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
PKDCC-207ENST00000485578 CECR2Q9BXF3 1484 aa27.69■■■□□ 2.02
PKDCC-207ENST00000485578 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
PKDCC-207ENST00000485578 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
PKDCC-207ENST00000485578 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
PKDCC-207ENST00000485578 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
PKDCC-207ENST00000485578 CUX2O14529 1486 aa26.64■■□□□ 1.86
PKDCC-207ENST00000485578 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
PKDCC-207ENST00000485578 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
PKDCC-207ENST00000485578 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
PKDCC-207ENST00000485578 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
PKDCC-207ENST00000485578 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
PKDCC-207ENST00000485578 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
PKDCC-207ENST00000485578 WIZO95785 1651 aa26.37■■□□□ 1.81
PKDCC-207ENST00000485578 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.8
PKDCC-207ENST00000485578 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
PKDCC-207ENST00000485578 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PKDCC-207ENST00000485578 NESP48681 1621 aa26.16■■□□□ 1.78
PKDCC-207ENST00000485578 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
PKDCC-207ENST00000485578 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
PKDCC-207ENST00000485578 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
PKDCC-207ENST00000485578 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
PKDCC-207ENST00000485578 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
PKDCC-207ENST00000485578 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
PKDCC-207ENST00000485578 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
PKDCC-207ENST00000485578 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
PKDCC-207ENST00000485578 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
PKDCC-207ENST00000485578 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
PKDCC-207ENST00000485578 WDR62O43379 1518 aa25.59■■□□□ 1.69
PKDCC-207ENST00000485578 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
PKDCC-207ENST00000485578 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
PKDCC-207ENST00000485578 PRDM2Q13029 1718 aa25.53■■□□□ 1.68
PKDCC-207ENST00000485578 CFTRP13569 1480 aa25.49■■□□□ 1.67
PKDCC-207ENST00000485578 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
PKDCC-207ENST00000485578 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
PKDCC-207ENST00000485578 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
PKDCC-207ENST00000485578 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
PKDCC-207ENST00000485578 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
PKDCC-207ENST00000485578 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
PKDCC-207ENST00000485578 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
PKDCC-207ENST00000485578 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
PKDCC-207ENST00000485578 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
PKDCC-207ENST00000485578 CUX1P39880 1505 aa24.92■■□□□ 1.58
PKDCC-207ENST00000485578 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
PKDCC-207ENST00000485578 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
PKDCC-207ENST00000485578 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PKDCC-207ENST00000485578 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
PKDCC-207ENST00000485578 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
PKDCC-207ENST00000485578 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
PKDCC-207ENST00000485578 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
PKDCC-207ENST00000485578 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
PKDCC-207ENST00000485578 CYB5RLQ6IPT4 315 aa24.79■■□□□ 1.56
PKDCC-207ENST00000485578 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
PKDCC-207ENST00000485578 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
PKDCC-207ENST00000485578 FBLN2P98095 1184 aa24.73■■□□□ 1.55
PKDCC-207ENST00000485578 CHD1O14646 1710 aa24.7■■□□□ 1.54
PKDCC-207ENST00000485578 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
PKDCC-207ENST00000485578 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
PKDCC-207ENST00000485578 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
PKDCC-207ENST00000485578 SOGA1O94964 1423 aa24.67■■□□□ 1.54
PKDCC-207ENST00000485578 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
PKDCC-207ENST00000485578 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
PKDCC-207ENST00000485578 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
PKDCC-207ENST00000485578 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
PKDCC-207ENST00000485578 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
PKDCC-207ENST00000485578 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
PKDCC-207ENST00000485578 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
PKDCC-207ENST00000485578 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
PKDCC-207ENST00000485578 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.51
PKDCC-207ENST00000485578 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
PKDCC-207ENST00000485578 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
PKDCC-207ENST00000485578 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
PKDCC-207ENST00000485578 CLASP1Q7Z460 1538 aa24.38■■□□□ 1.49
PKDCC-207ENST00000485578 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
PKDCC-207ENST00000485578 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
PKDCC-207ENST00000485578 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
PKDCC-207ENST00000485578 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
PKDCC-207ENST00000485578 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
PKDCC-207ENST00000485578 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
PKDCC-207ENST00000485578 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
PKDCC-207ENST00000485578 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
PKDCC-207ENST00000485578 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
PKDCC-207ENST00000485578 CUL7Q14999 1698 aa24■■□□□ 1.43
PKDCC-207ENST00000485578 IGF1RP08069 1367 aa23.99■■□□□ 1.43
PKDCC-207ENST00000485578 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
PKDCC-207ENST00000485578 NUP160Q12769 1436 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms