RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
CCDC130-206ENST00000587019 CCDC180Q9P1Z9 1646 aa37.62■■■■□ 3.61
CCDC130-206ENST00000587019 ABCC9O60706 1549 aa37.26■■■■□ 3.55
CCDC130-206ENST00000587019 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
CCDC130-206ENST00000587019 NACADO15069 1562 aa35.45■■■■□ 3.27
CCDC130-206ENST00000587019 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
CCDC130-206ENST00000587019 MYO15BQ96JP2 1530 aa35.07■■■■□ 3.21
CCDC130-206ENST00000587019 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
CCDC130-206ENST00000587019 UNC13AQ9UPW8 1703 aa34.83■■■■□ 3.17
CCDC130-206ENST00000587019 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
CCDC130-206ENST00000587019 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
CCDC130-206ENST00000587019 DNAJC5BQ9UF47 199 aa34.58■■■■□ 3.13
CCDC130-206ENST00000587019 BICRAQ9NZM4 1560 aa34.56■■■■□ 3.12
CCDC130-206ENST00000587019 SCRIBQ14160 1630 aa34.25■■■■□ 3.07
CCDC130-206ENST00000587019 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
CCDC130-206ENST00000587019 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
CCDC130-206ENST00000587019 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
CCDC130-206ENST00000587019 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
CCDC130-206ENST00000587019 SMARCA4P51532 1647 aa32.7■■■□□ 2.83
CCDC130-206ENST00000587019 NCAPD3P42695 1498 aa32.68■■■□□ 2.82
CCDC130-206ENST00000587019 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
CCDC130-206ENST00000587019 SMARCA2P51531 1590 aa32.6■■■□□ 2.81
CCDC130-206ENST00000587019 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
CCDC130-206ENST00000587019 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
CCDC130-206ENST00000587019 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
CCDC130-206ENST00000587019 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
CCDC130-206ENST00000587019 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
CCDC130-206ENST00000587019 ERCC6Q03468 1493 aa32.17■■■□□ 2.74
CCDC130-206ENST00000587019 NESP48681 1621 aa32.07■■■□□ 2.72
CCDC130-206ENST00000587019 CUX2O14529 1486 aa32.05■■■□□ 2.72
CCDC130-206ENST00000587019 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
CCDC130-206ENST00000587019 WIZO95785 1651 aa31.95■■■□□ 2.7
CCDC130-206ENST00000587019 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
CCDC130-206ENST00000587019 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
CCDC130-206ENST00000587019 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
CCDC130-206ENST00000587019 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
CCDC130-206ENST00000587019 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
CCDC130-206ENST00000587019 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
CCDC130-206ENST00000587019 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
CCDC130-206ENST00000587019 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
CCDC130-206ENST00000587019 CFTRP13569 1480 aa31.4■■■□□ 2.62
CCDC130-206ENST00000587019 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
CCDC130-206ENST00000587019 WDR62O43379 1518 aa31.39■■■□□ 2.62
CCDC130-206ENST00000587019 FANCD2Q9BXW9 1451 aa31.36■■■□□ 2.61
CCDC130-206ENST00000587019 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
CCDC130-206ENST00000587019 CCDC88BA6NC98 1476 aa31.17■■■□□ 2.58
CCDC130-206ENST00000587019 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
CCDC130-206ENST00000587019 TOPBP1Q92547 1522 aa30.8■■■□□ 2.52
CCDC130-206ENST00000587019 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
CCDC130-206ENST00000587019 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
CCDC130-206ENST00000587019 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
CCDC130-206ENST00000587019 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
CCDC130-206ENST00000587019 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
CCDC130-206ENST00000587019 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
CCDC130-206ENST00000587019 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
CCDC130-206ENST00000587019 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
CCDC130-206ENST00000587019 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
CCDC130-206ENST00000587019 CUX1P39880 1505 aa30.37■■■□□ 2.45
CCDC130-206ENST00000587019 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.453e-6■■■■□ 20.5
CCDC130-206ENST00000587019 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
CCDC130-206ENST00000587019 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
CCDC130-206ENST00000587019 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
CCDC130-206ENST00000587019 SOGA1O94964 1423 aa30.31■■■□□ 2.44
CCDC130-206ENST00000587019 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
CCDC130-206ENST00000587019 CHD1O14646 1710 aa30.26■■■□□ 2.43
CCDC130-206ENST00000587019 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
CCDC130-206ENST00000587019 RIMBP3CA6NJZ7 1639 aa30.19■■■□□ 2.42
CCDC130-206ENST00000587019 RIMBP3BA6NNM3 1639 aa30.19■■■□□ 2.42
CCDC130-206ENST00000587019 RIMBP3Q9UFD9 1639 aa30.19■■■□□ 2.42
CCDC130-206ENST00000587019 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
CCDC130-206ENST00000587019 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
CCDC130-206ENST00000587019 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
CCDC130-206ENST00000587019 GRIN2BQ13224 1484 aa30.07■■■□□ 2.4
CCDC130-206ENST00000587019 FBLN2P98095 1184 aa30.07■■■□□ 2.4
CCDC130-206ENST00000587019 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
CCDC130-206ENST00000587019 PBRM1Q86U86 1689 aa30.03■■■□□ 2.4
CCDC130-206ENST00000587019 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
CCDC130-206ENST00000587019 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
CCDC130-206ENST00000587019 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
CCDC130-206ENST00000587019 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
CCDC130-206ENST00000587019 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
CCDC130-206ENST00000587019 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
CCDC130-206ENST00000587019 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
CCDC130-206ENST00000587019 CLASP1Q7Z460 1538 aa29.92■■■□□ 2.38
CCDC130-206ENST00000587019 CHMP7Q8WUX9 453 aaPredicted RBP29.91■■■□□ 2.38
CCDC130-206ENST00000587019 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
CCDC130-206ENST00000587019 ADAMTS12P58397 1594 aa29.77■■■□□ 2.36
CCDC130-206ENST00000587019 CYB5RLQ6IPT4 315 aa29.76■■■□□ 2.35
CCDC130-206ENST00000587019 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
CCDC130-206ENST00000587019 ERICH3Q5RHP9 1530 aa29.67■■■□□ 2.34
CCDC130-206ENST00000587019 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
CCDC130-206ENST00000587019 NUP160Q12769 1436 aa29.59■■■□□ 2.33
CCDC130-206ENST00000587019 CEP170Q5SW79 1584 aa29.59■■■□□ 2.33
CCDC130-206ENST00000587019 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
CCDC130-206ENST00000587019 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
CCDC130-206ENST00000587019 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
CCDC130-206ENST00000587019 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
CCDC130-206ENST00000587019 RUSC2Q8N2Y8 1516 aa29.35■■■□□ 2.29
CCDC130-206ENST00000587019 CUL7Q14999 1698 aa29.33■■■□□ 2.29
CCDC130-206ENST00000587019 IGF1RP08069 1367 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms