RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
DNMT3A-209ENST00000470983 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
DNMT3A-209ENST00000470983 ABCC9O60706 1549 aa32.63■■■□□ 2.81
DNMT3A-209ENST00000470983 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
DNMT3A-209ENST00000470983 NACADO15069 1562 aa30.8■■■□□ 2.52
DNMT3A-209ENST00000470983 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
DNMT3A-209ENST00000470983 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
DNMT3A-209ENST00000470983 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
DNMT3A-209ENST00000470983 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
DNMT3A-209ENST00000470983 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
DNMT3A-209ENST00000470983 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
DNMT3A-209ENST00000470983 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
DNMT3A-209ENST00000470983 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
DNMT3A-209ENST00000470983 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
DNMT3A-209ENST00000470983 SHROOM4Q9ULL8 1493 aa29.85■■■□□ 2.37
DNMT3A-209ENST00000470983 CECR2Q9BXF3 1484 aa29.49■■■□□ 2.31
DNMT3A-209ENST00000470983 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
DNMT3A-209ENST00000470983 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
DNMT3A-209ENST00000470983 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.18
DNMT3A-209ENST00000470983 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
DNMT3A-209ENST00000470983 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
DNMT3A-209ENST00000470983 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
DNMT3A-209ENST00000470983 CUX2O14529 1486 aa28.37■■■□□ 2.13
DNMT3A-209ENST00000470983 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
DNMT3A-209ENST00000470983 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
DNMT3A-209ENST00000470983 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
DNMT3A-209ENST00000470983 SMARCA2P51531 1590 aa28.27■■■□□ 2.12
DNMT3A-209ENST00000470983 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
DNMT3A-209ENST00000470983 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
DNMT3A-209ENST00000470983 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
DNMT3A-209ENST00000470983 WIZO95785 1651 aa28.04■■■□□ 2.08
DNMT3A-209ENST00000470983 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
DNMT3A-209ENST00000470983 NESP48681 1621 aa27.89■■■□□ 2.05
DNMT3A-209ENST00000470983 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
DNMT3A-209ENST00000470983 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
DNMT3A-209ENST00000470983 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
DNMT3A-209ENST00000470983 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
DNMT3A-209ENST00000470983 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
DNMT3A-209ENST00000470983 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
DNMT3A-209ENST00000470983 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
DNMT3A-209ENST00000470983 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
DNMT3A-209ENST00000470983 WDR62O43379 1518 aa27.32■■□□□ 1.96
DNMT3A-209ENST00000470983 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
DNMT3A-209ENST00000470983 CFTRP13569 1480 aa27.28■■□□□ 1.96
DNMT3A-209ENST00000470983 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
DNMT3A-209ENST00000470983 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
DNMT3A-209ENST00000470983 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
DNMT3A-209ENST00000470983 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
DNMT3A-209ENST00000470983 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
DNMT3A-209ENST00000470983 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
DNMT3A-209ENST00000470983 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
DNMT3A-209ENST00000470983 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
DNMT3A-209ENST00000470983 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
DNMT3A-209ENST00000470983 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
DNMT3A-209ENST00000470983 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
DNMT3A-209ENST00000470983 CUX1P39880 1505 aa26.55■■□□□ 1.84
DNMT3A-209ENST00000470983 RIMBP3CA6NJZ7 1639 aa26.52■■□□□ 1.84
DNMT3A-209ENST00000470983 RIMBP3BA6NNM3 1639 aa26.52■■□□□ 1.84
DNMT3A-209ENST00000470983 RIMBP3Q9UFD9 1639 aa26.52■■□□□ 1.84
DNMT3A-209ENST00000470983 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
DNMT3A-209ENST00000470983 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
DNMT3A-209ENST00000470983 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
DNMT3A-209ENST00000470983 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
DNMT3A-209ENST00000470983 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
DNMT3A-209ENST00000470983 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
DNMT3A-209ENST00000470983 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
DNMT3A-209ENST00000470983 FBLN2P98095 1184 aa26.4■■□□□ 1.82
DNMT3A-209ENST00000470983 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
DNMT3A-209ENST00000470983 SOGA1O94964 1423 aa26.38■■□□□ 1.81
DNMT3A-209ENST00000470983 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
DNMT3A-209ENST00000470983 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
DNMT3A-209ENST00000470983 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
DNMT3A-209ENST00000470983 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
DNMT3A-209ENST00000470983 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
DNMT3A-209ENST00000470983 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
DNMT3A-209ENST00000470983 TRHP20396 242 aaPredicted RBP26.26■■□□□ 1.79
DNMT3A-209ENST00000470983 CHMP7Q8WUX9 453 aaPredicted RBP26.23■■□□□ 1.79
DNMT3A-209ENST00000470983 CHD1O14646 1710 aa26.22■■□□□ 1.79
DNMT3A-209ENST00000470983 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
DNMT3A-209ENST00000470983 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
DNMT3A-209ENST00000470983 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
DNMT3A-209ENST00000470983 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
DNMT3A-209ENST00000470983 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
DNMT3A-209ENST00000470983 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
DNMT3A-209ENST00000470983 ABCA5Q8WWZ7 1642 aa26.12■■□□□ 1.77
DNMT3A-209ENST00000470983 GAPVD1Q14C86 1478 aa26.08■■□□□ 1.77
DNMT3A-209ENST00000470983 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
DNMT3A-209ENST00000470983 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
DNMT3A-209ENST00000470983 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
DNMT3A-209ENST00000470983 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
DNMT3A-209ENST00000470983 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
DNMT3A-209ENST00000470983 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
DNMT3A-209ENST00000470983 GRIN2AQ12879 1464 aa25.76■■□□□ 1.71
DNMT3A-209ENST00000470983 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
DNMT3A-209ENST00000470983 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
DNMT3A-209ENST00000470983 NUP160Q12769 1436 aa25.66■■□□□ 1.7
DNMT3A-209ENST00000470983 CUL7Q14999 1698 aa25.65■■□□□ 1.7
DNMT3A-209ENST00000470983 IGF1RP08069 1367 aa25.65■■□□□ 1.7
DNMT3A-209ENST00000470983 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
DNMT3A-209ENST00000470983 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms