RNA–Protein interactions for RNA: ENST00000563514.1

TRAPPC2L-205, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 419 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-205ENST00000563514 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
TRAPPC2L-205ENST00000563514 ABCC9O60706 1549 aa28.39■■■□□ 2.14
TRAPPC2L-205ENST00000563514 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
TRAPPC2L-205ENST00000563514 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
TRAPPC2L-205ENST00000563514 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
TRAPPC2L-205ENST00000563514 NACADO15069 1562 aa26.71■■□□□ 1.87
TRAPPC2L-205ENST00000563514 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
TRAPPC2L-205ENST00000563514 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
TRAPPC2L-205ENST00000563514 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
TRAPPC2L-205ENST00000563514 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
TRAPPC2L-205ENST00000563514 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
TRAPPC2L-205ENST00000563514 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
TRAPPC2L-205ENST00000563514 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
TRAPPC2L-205ENST00000563514 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
TRAPPC2L-205ENST00000563514 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
TRAPPC2L-205ENST00000563514 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
TRAPPC2L-205ENST00000563514 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
TRAPPC2L-205ENST00000563514 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
TRAPPC2L-205ENST00000563514 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
TRAPPC2L-205ENST00000563514 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
TRAPPC2L-205ENST00000563514 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
TRAPPC2L-205ENST00000563514 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
TRAPPC2L-205ENST00000563514 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
TRAPPC2L-205ENST00000563514 CUX2O14529 1486 aa24.5■■□□□ 1.51
TRAPPC2L-205ENST00000563514 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
TRAPPC2L-205ENST00000563514 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
TRAPPC2L-205ENST00000563514 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC2L-205ENST00000563514 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
TRAPPC2L-205ENST00000563514 NESP48681 1621 aa24.35■■□□□ 1.49
TRAPPC2L-205ENST00000563514 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
TRAPPC2L-205ENST00000563514 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
TRAPPC2L-205ENST00000563514 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
TRAPPC2L-205ENST00000563514 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
TRAPPC2L-205ENST00000563514 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
TRAPPC2L-205ENST00000563514 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
TRAPPC2L-205ENST00000563514 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
TRAPPC2L-205ENST00000563514 WIZO95785 1651 aa23.86■■□□□ 1.41
TRAPPC2L-205ENST00000563514 MRC2Q9UBG0 1479 aa23.82■■□□□ 1.4
TRAPPC2L-205ENST00000563514 WDR62O43379 1518 aa23.74■■□□□ 1.39
TRAPPC2L-205ENST00000563514 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC2L-205ENST00000563514 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
TRAPPC2L-205ENST00000563514 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
TRAPPC2L-205ENST00000563514 CFTRP13569 1480 aa23.66■■□□□ 1.38
TRAPPC2L-205ENST00000563514 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
TRAPPC2L-205ENST00000563514 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
TRAPPC2L-205ENST00000563514 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
TRAPPC2L-205ENST00000563514 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
TRAPPC2L-205ENST00000563514 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
TRAPPC2L-205ENST00000563514 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
TRAPPC2L-205ENST00000563514 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC2L-205ENST00000563514 TOPBP1Q92547 1522 aa23.2■■□□□ 1.3
TRAPPC2L-205ENST00000563514 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
TRAPPC2L-205ENST00000563514 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
TRAPPC2L-205ENST00000563514 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
TRAPPC2L-205ENST00000563514 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRAPPC2L-205ENST00000563514 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
TRAPPC2L-205ENST00000563514 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
TRAPPC2L-205ENST00000563514 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
TRAPPC2L-205ENST00000563514 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
TRAPPC2L-205ENST00000563514 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
TRAPPC2L-205ENST00000563514 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC2L-205ENST00000563514 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
TRAPPC2L-205ENST00000563514 FBLN2P98095 1184 aa22.95■■□□□ 1.26
TRAPPC2L-205ENST00000563514 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
TRAPPC2L-205ENST00000563514 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
TRAPPC2L-205ENST00000563514 SOGA1O94964 1423 aa22.9■■□□□ 1.26
TRAPPC2L-205ENST00000563514 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
TRAPPC2L-205ENST00000563514 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
TRAPPC2L-205ENST00000563514 CHD1O14646 1710 aa22.8■■□□□ 1.24
TRAPPC2L-205ENST00000563514 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
TRAPPC2L-205ENST00000563514 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
TRAPPC2L-205ENST00000563514 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC2L-205ENST00000563514 CUX1P39880 1505 aa22.75■■□□□ 1.23
TRAPPC2L-205ENST00000563514 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC2L-205ENST00000563514 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
TRAPPC2L-205ENST00000563514 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
TRAPPC2L-205ENST00000563514 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC2L-205ENST00000563514 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
TRAPPC2L-205ENST00000563514 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
TRAPPC2L-205ENST00000563514 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
TRAPPC2L-205ENST00000563514 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
TRAPPC2L-205ENST00000563514 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
TRAPPC2L-205ENST00000563514 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
TRAPPC2L-205ENST00000563514 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
TRAPPC2L-205ENST00000563514 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
TRAPPC2L-205ENST00000563514 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
TRAPPC2L-205ENST00000563514 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
TRAPPC2L-205ENST00000563514 NUP160Q12769 1436 aa22.32■■□□□ 1.16
TRAPPC2L-205ENST00000563514 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
TRAPPC2L-205ENST00000563514 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
TRAPPC2L-205ENST00000563514 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
TRAPPC2L-205ENST00000563514 ERCC6L2Q5T890 1561 aa22.28■■□□□ 1.16
TRAPPC2L-205ENST00000563514 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
TRAPPC2L-205ENST00000563514 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
TRAPPC2L-205ENST00000563514 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
TRAPPC2L-205ENST00000563514 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
TRAPPC2L-205ENST00000563514 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
TRAPPC2L-205ENST00000563514 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.14
TRAPPC2L-205ENST00000563514 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
TRAPPC2L-205ENST00000563514 IGF1RP08069 1367 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms