Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 IRF3-208ENST00000594387 800 ntTSL 316.16■□□□□ 0.187e-7■■□□□ 14.5
SRSF1Q07955 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.85■□□□□ 0.137e-7■■□□□ 14.5
SRSF1Q07955 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 07e-7■■□□□ 14.5
SRSF1Q07955 IRF3-226ENST00000600453 700 ntTSL 314.75□□□□□ -0.057e-7■■□□□ 14.5
SRSF1Q07955 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.087e-7■■□□□ 14.5
SRSF1Q07955 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.44□□□□□ -0.17e-7■■□□□ 14.5
SRSF1Q07955 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.61□□□□□ -0.237e-7■■□□□ 14.5
SRSF1Q07955 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.47□□□□□ -0.257e-7■■□□□ 14.5
SRSF1Q07955 IRF3-212ENST00000596756 931 ntTSL 513.45□□□□□ -0.267e-7■■□□□ 14.5
SRSF1Q07955 IRF3-206ENST00000593818 924 ntTSL 212.84□□□□□ -0.357e-7■■□□□ 14.5
SRSF1Q07955 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.23□□□□□ -0.457e-7■■□□□ 14.5
SRSF1Q07955 IRF3-219ENST00000597636 2874 ntTSL 512.14□□□□□ -0.477e-7■■□□□ 14.5
SRSF1Q07955 IRF3-229ENST00000601373 680 ntTSL 212.05□□□□□ -0.487e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-219ENST00000635935 2000 ntTSL 522.58■■□□□ 1.213e-7■■□□□ 14.5
SRSF1Q07955 NECAB3-212ENST00000485976 1016 ntTSL 521.03■□□□□ 0.961e-10■■□□□ 14.5
SRSF1Q07955 NECAB3-207ENST00000478237 827 ntTSL 221.03■□□□□ 0.961e-10■■□□□ 14.5
SRSF1Q07955 KRT18P5-201ENST00000436075 1291 ntBASIC20.85■□□□□ 0.933e-7■■□□□ 14.5
SRSF1Q07955 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.07■□□□□ 0.643e-7■■□□□ 14.5
SRSF1Q07955 NECAB3-209ENST00000483813 1277 ntTSL 518.44■□□□□ 0.541e-10■■□□□ 14.5
SRSF1Q07955 NECAB3-217ENST00000606106 591 ntTSL 418.32■□□□□ 0.522e-10■■□□□ 14.5
SRSF1Q07955 PIGQ-208ENST00000443147 2054 ntTSL 217.01■□□□□ 0.313e-7■■□□□ 14.5
SRSF1Q07955 NECAB3-216ENST00000498353 597 ntTSL 316.65■□□□□ 0.262e-10■■□□□ 14.5
SRSF1Q07955 PPP1R3E-206ENST00000560913 932 ntTSL 216.59■□□□□ 0.252e-12■■□□□ 14.5
SRSF1Q07955 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.243e-7■■□□□ 14.5
SRSF1Q07955 MTERF2-205ENST00000550496 418 ntTSL 316.52■□□□□ 0.243e-7■■□□□ 14.5
SRSF1Q07955 SUN1-233ENST00000488628 626 ntTSL 416.36■□□□□ 0.212e-6■■□□□ 14.5
SRSF1Q07955 SUN1-231ENST00000480475 680 ntTSL 416.36■□□□□ 0.212e-6■■□□□ 14.5
SRSF1Q07955 MTERF2-204ENST00000548101 715 ntTSL 316.29■□□□□ 0.23e-7■■□□□ 14.5
SRSF1Q07955 NECAB3-204ENST00000463246 766 ntTSL 316.06■□□□□ 0.161e-10■■□□□ 14.5
SRSF1Q07955 NECAB3-208ENST00000480994 732 ntTSL 515.85■□□□□ 0.131e-10■■□□□ 14.5
SRSF1Q07955 PIGQ-205ENST00000420990 932 ntTSL 515.8■□□□□ 0.123e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-217ENST00000635205 936 ntTSL 515.74■□□□□ 0.113e-7■■□□□ 14.5
SRSF1Q07955 SNHG17-205ENST00000424235 764 ntTSL 215.5■□□□□ 0.072e-10■■□□□ 14.5
SRSF1Q07955 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.033e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-203ENST00000431430 572 ntTSL 415.19■□□□□ 0.023e-7■■□□□ 14.5
SRSF1Q07955 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.013e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-224ENST00000638143 563 ntTSL 514.75□□□□□ -0.053e-7■■□□□ 14.5
SRSF1Q07955 PPP1R3E-209ENST00000561437 690 ntTSL 214.75□□□□□ -0.052e-12■■□□□ 14.5
SRSF1Q07955 SUN1-225ENST00000464442 580 ntTSL 414.65□□□□□ -0.062e-6■■□□□ 14.5
SRSF1Q07955 PIGQ-222ENST00000637468 650 ntTSL 514.5□□□□□ -0.093e-7■■□□□ 14.5
SRSF1Q07955 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.23□□□□□ -0.132e-10■■□□□ 14.5
SRSF1Q07955 PIGQ-218ENST00000635909 2212 ntTSL 514.18□□□□□ -0.143e-7■■□□□ 14.5
SRSF1Q07955 NECAB3-218ENST00000606525 2010 ntTSL 214.02□□□□□ -0.161e-10■■□□□ 14.5
SRSF1Q07955 METTL3-209ENST00000542054 975 ntTSL 213.89□□□□□ -0.193e-7■■□□□ 14.5
SRSF1Q07955 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.66□□□□□ -0.222e-10■■□□□ 14.5
SRSF1Q07955 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.243e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.263e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-220ENST00000636005 1355 ntTSL 513.4□□□□□ -0.263e-7■■□□□ 14.5
SRSF1Q07955 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.272e-12■■□□□ 14.5
SRSF1Q07955 KLHL22-207ENST00000458248 742 ntTSL 313.21□□□□□ -0.293e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-205ENST00000444967 1045 ntTSL 313.17□□□□□ -0.33e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-211ENST00000480424 2202 ntTSL 213.12□□□□□ -0.313e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-209ENST00000479601 1389 ntTSL 512.81□□□□□ -0.363e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-204ENST00000443285 792 ntTSL 412.65□□□□□ -0.383e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.64□□□□□ -0.393e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-212ENST00000494929 550 ntTSL 412.57□□□□□ -0.43e-7■■□□□ 14.5
SRSF1Q07955 METTL3-214ENST00000545788 545 ntTSL 212.31□□□□□ -0.443e-7■■□□□ 14.5
SRSF1Q07955 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.442e-10■■□□□ 14.5
SRSF1Q07955 METTL3-202ENST00000367606 802 ntTSL 412.25□□□□□ -0.453e-7■■□□□ 14.5
SRSF1Q07955 PIGQ-221ENST00000636657 2841 ntTSL 512.2□□□□□ -0.463e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.95□□□□□ -0.53e-7■■□□□ 14.5
SRSF1Q07955 METTL3-205ENST00000536201 1592 ntTSL 211.86□□□□□ -0.513e-7■■□□□ 14.5
SRSF1Q07955 KLHL22-206ENST00000451553 724 ntTSL 311.83□□□□□ -0.523e-7■■□□□ 14.5
SRSF1Q07955 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.72□□□□□ -0.537e-10■■□□□ 14.5
SRSF1Q07955 PIGQ-213ENST00000540241 608 ntTSL 311.7□□□□□ -0.543e-7■■□□□ 14.5
SRSF1Q07955 MTERF2-203ENST00000547115 749 ntTSL 311.55□□□□□ -0.563e-7■■□□□ 14.5
SRSF1Q07955 PPP1R3E-204ENST00000559942 1187 ntTSL 1 (best)11.09□□□□□ -0.632e-12■■□□□ 14.5
SRSF1Q07955 BRD1-204ENST00000438393 3051 ntTSL 210.94□□□□□ -0.667e-10■■□□□ 14.5
SRSF1Q07955 CPED1-209ENST00000520801 553 ntTSL 410.94□□□□□ -0.663e-7■■□□□ 14.5
SRSF1Q07955 PSMD14-202ENST00000437630 577 ntTSL 510.74□□□□□ -0.692e-10■■□□□ 14.5
SRSF1Q07955 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.697e-10■■□□□ 14.5
SRSF1Q07955 METTL3-213ENST00000545319 563 ntTSL 410.58□□□□□ -0.723e-7■■□□□ 14.5
SRSF1Q07955 METTL3-207ENST00000538267 1553 ntTSL 210.42□□□□□ -0.743e-7■■□□□ 14.5
SRSF1Q07955 PPP1R3E-203ENST00000559314 2351 ntTSL 210.08□□□□□ -0.82e-12■■□□□ 14.5
SRSF1Q07955 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.853e-7■■□□□ 14.5
SRSF1Q07955 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.867e-10■■□□□ 14.5
SRSF1Q07955 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC9.66□□□□□ -0.867e-10■■□□□ 14.5
SRSF1Q07955 PSMD14-204ENST00000478123 478 ntTSL 29.48□□□□□ -0.892e-10■■□□□ 14.5
SRSF1Q07955 CPED1-208ENST00000495036 2198 ntTSL 1 (best)9.26□□□□□ -0.933e-7■■□□□ 14.5
SRSF1Q07955 PPP1R3E-202ENST00000558058 3222 ntTSL 38.74□□□□□ -1.012e-12■■□□□ 14.5
SRSF1Q07955 HNRNPU-202ENST00000366525 2851 ntTSL 57.73□□□□□ -1.173e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC7.28□□□□□ -1.243e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC6.87□□□□□ -1.313e-7■■□□□ 14.5
SRSF1Q07955 CPED1-204ENST00000428526 2219 ntTSL 26.85□□□□□ -1.313e-7■■□□□ 14.5
SRSF1Q07955 TAF1D-206ENST00000527068 1023 ntTSL 56.71□□□□□ -1.344e-14■■□□□ 14.5
SRSF1Q07955 HNRNPU-222ENST00000639880 4239 ntTSL 56.67□□□□□ -1.343e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-207ENST00000468690 5273 ntTSL 56.21□□□□□ -1.413e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-206ENST00000465881 883 ntTSL 56.01□□□□□ -1.453e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC5.94□□□□□ -1.463e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-213ENST00000638301 3650 ntTSL 55.06□□□□□ -1.63e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-220ENST00000639667 3940 ntTSL 25.05□□□□□ -1.63e-7■■□□□ 14.5
SRSF1Q07955 ZCCHC11-203ENST00000371541 4319 ntTSL 25.03□□□□□ -1.63e-7■■□□□ 14.5
SRSF1Q07955 ZCCHC11-212ENST00000481133 521 ntTSL 34.84□□□□□ -1.633e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-210ENST00000483966 1069 ntTSL 24.03□□□□□ -1.763e-7■■□□□ 14.5
SRSF1Q07955 HNRNPU-215ENST00000638589 2225 ntTSL 23.42□□□□□ -1.863e-7■■□□□ 14.5
SRSF1Q07955 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.764e-7■■□□□ 14.5
SRSF1Q07955 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.1■□□□□ 0.333e-8■■□□□ 14.5
SRSF1Q07955 FAM118A-204ENST00000427777 521 ntTSL 413.66□□□□□ -0.223e-8■■□□□ 14.5
SRSF1Q07955 FAM118A-211ENST00000477714 756 ntTSL 213.14□□□□□ -0.313e-8■■□□□ 14.5
SRSF1Q07955 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.754e-7■■□□□ 14.5
Retrieved 100 of 14,836 protein–RNA pairs in 65.8 ms