RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 NISCHQ9Y2I1 1504 aa13.24□□□□□ -0.29
HNRNPU-220ENST00000639667 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
HNRNPU-220ENST00000639667 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
HNRNPU-220ENST00000639667 ABCC9O60706 1549 aa11.47□□□□□ -0.57
HNRNPU-220ENST00000639667 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
HNRNPU-220ENST00000639667 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
HNRNPU-220ENST00000639667 SHROOM4Q9ULL8 1493 aa10.92□□□□□ -0.66
HNRNPU-220ENST00000639667 NACADO15069 1562 aa10.92□□□□□ -0.66
HNRNPU-220ENST00000639667 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
HNRNPU-220ENST00000639667 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
HNRNPU-220ENST00000639667 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
HNRNPU-220ENST00000639667 SCRIBQ14160 1630 aa10.78□□□□□ -0.68
HNRNPU-220ENST00000639667 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
HNRNPU-220ENST00000639667 BICRAQ9NZM4 1560 aa10.5□□□□□ -0.73
HNRNPU-220ENST00000639667 SUPT5HO00267 1087 aaKnown RBP10.43□□□□□ -0.74
HNRNPU-220ENST00000639667 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
HNRNPU-220ENST00000639667 DNAJC5BQ9UF47 199 aa10.36□□□□□ -0.75
HNRNPU-220ENST00000639667 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
HNRNPU-220ENST00000639667 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
HNRNPU-220ENST00000639667 MROH2BQ7Z745 1585 aa10.24□□□□□ -0.77
HNRNPU-220ENST00000639667 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
HNRNPU-220ENST00000639667 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.77
HNRNPU-220ENST00000639667 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
HNRNPU-220ENST00000639667 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
HNRNPU-220ENST00000639667 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-220ENST00000639667 SMARCA2P51531 1590 aa10.15□□□□□ -0.79
HNRNPU-220ENST00000639667 WIZO95785 1651 aa10.12□□□□□ -0.79
HNRNPU-220ENST00000639667 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
HNRNPU-220ENST00000639667 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
HNRNPU-220ENST00000639667 TOP2AP11388 1531 aaKnown RBP10□□□□□ -0.81
HNRNPU-220ENST00000639667 PEG3Q9GZU2 1588 aa9.98□□□□□ -0.81
HNRNPU-220ENST00000639667 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.82
HNRNPU-220ENST00000639667 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
HNRNPU-220ENST00000639667 NESP48681 1621 aa9.91□□□□□ -0.82
HNRNPU-220ENST00000639667 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
HNRNPU-220ENST00000639667 PDS5BQ9NTI5 1447 aa9.86□□□□□ -0.83
HNRNPU-220ENST00000639667 CFTRP13569 1480 aa9.8□□□□□ -0.84
HNRNPU-220ENST00000639667 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
HNRNPU-220ENST00000639667 LAMC3Q9Y6N6 1575 aa9.78□□□□□ -0.84
HNRNPU-220ENST00000639667 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.84
HNRNPU-220ENST00000639667 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
HNRNPU-220ENST00000639667 FAM9AQ8IZU1 332 aaPredicted RBP9.7□□□□□ -0.86
HNRNPU-220ENST00000639667 MRC2Q9UBG0 1479 aa9.69□□□□□ -0.86
HNRNPU-220ENST00000639667 WRNQ14191 1432 aaPredicted RBP eCLIP9.68□□□□□ -0.86
HNRNPU-220ENST00000639667 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
HNRNPU-220ENST00000639667 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
HNRNPU-220ENST00000639667 CHIC1Q5VXU3 224 aa9.67□□□□□ -0.86
HNRNPU-220ENST00000639667 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
HNRNPU-220ENST00000639667 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-220ENST00000639667 FBLN2P98095 1184 aa9.63□□□□□ -0.87
HNRNPU-220ENST00000639667 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
HNRNPU-220ENST00000639667 SOGA1O94964 1423 aa9.61□□□□□ -0.87
HNRNPU-220ENST00000639667 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
HNRNPU-220ENST00000639667 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
HNRNPU-220ENST00000639667 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
HNRNPU-220ENST00000639667 CUX1P39880 1505 aa9.58□□□□□ -0.88
HNRNPU-220ENST00000639667 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
HNRNPU-220ENST00000639667 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
HNRNPU-220ENST00000639667 CUX2O14529 1486 aa9.55□□□□□ -0.88
HNRNPU-220ENST00000639667 POLA1P09884 1462 aaPredicted RBP9.55□□□□□ -0.88
HNRNPU-220ENST00000639667 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
HNRNPU-220ENST00000639667 WDR62O43379 1518 aa9.55□□□□□ -0.88
HNRNPU-220ENST00000639667 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
HNRNPU-220ENST00000639667 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.884e-8■■■■■ 31.6
HNRNPU-220ENST00000639667 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
HNRNPU-220ENST00000639667 CHMP7Q8WUX9 453 aaPredicted RBP9.52□□□□□ -0.89
HNRNPU-220ENST00000639667 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
HNRNPU-220ENST00000639667 ZNF608Q9ULD9 1512 aaPredicted RBP9.5□□□□□ -0.89
HNRNPU-220ENST00000639667 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
HNRNPU-220ENST00000639667 KIF27Q86VH2 1401 aa9.49□□□□□ -0.89
HNRNPU-220ENST00000639667 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
HNRNPU-220ENST00000639667 UBTFP17480 764 aaKnown RBP9.47□□□□□ -0.89
HNRNPU-220ENST00000639667 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
HNRNPU-220ENST00000639667 TTBK1Q5TCY1 1321 aaPredicted RBP9.44□□□□□ -0.9
HNRNPU-220ENST00000639667 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
HNRNPU-220ENST00000639667 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
HNRNPU-220ENST00000639667 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
HNRNPU-220ENST00000639667 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
HNRNPU-220ENST00000639667 OSCARQ8IYS5 282 aa9.4□□□□□ -0.9
HNRNPU-220ENST00000639667 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
HNRNPU-220ENST00000639667 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
HNRNPU-220ENST00000639667 IGF1RP08069 1367 aa9.39□□□□□ -0.91
HNRNPU-220ENST00000639667 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-220ENST00000639667 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
HNRNPU-220ENST00000639667 EIF4G3O43432 1585 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-220ENST00000639667 EEA1Q15075 1411 aa9.35□□□□□ -0.91
HNRNPU-220ENST00000639667 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
HNRNPU-220ENST00000639667 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
HNRNPU-220ENST00000639667 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-220ENST00000639667 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
HNRNPU-220ENST00000639667 SYNJ2O15056 1496 aa9.31□□□□□ -0.92
HNRNPU-220ENST00000639667 RAPGEF2Q9Y4G8 1499 aa9.31□□□□□ -0.92
HNRNPU-220ENST00000639667 ERICH3Q5RHP9 1530 aa9.3□□□□□ -0.92
HNRNPU-220ENST00000639667 ABCA5Q8WWZ7 1642 aa9.3□□□□□ -0.92
HNRNPU-220ENST00000639667 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
HNRNPU-220ENST00000639667 PBRM1Q86U86 1689 aa9.27□□□□□ -0.92
HNRNPU-220ENST00000639667 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
HNRNPU-220ENST00000639667 GRIN2AQ12879 1464 aa9.27□□□□□ -0.93
HNRNPU-220ENST00000639667 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
HNRNPU-220ENST00000639667 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms