RNA–Protein interactions for RNA: ENST00000465881.2

HNRNPU-206, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 883 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-206ENST00000465881 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
HNRNPU-206ENST00000465881 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
HNRNPU-206ENST00000465881 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
HNRNPU-206ENST00000465881 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
HNRNPU-206ENST00000465881 FOXD1Q16676 465 aa19.43■□□□□ 0.7
HNRNPU-206ENST00000465881 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
HNRNPU-206ENST00000465881 ADRA2BP18089 450 aa18.36■□□□□ 0.53
HNRNPU-206ENST00000465881 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
HNRNPU-206ENST00000465881 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
HNRNPU-206ENST00000465881 MSH5O43196 834 aa18.21■□□□□ 0.51
HNRNPU-206ENST00000465881 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
HNRNPU-206ENST00000465881 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
HNRNPU-206ENST00000465881 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
HNRNPU-206ENST00000465881 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
HNRNPU-206ENST00000465881 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
HNRNPU-206ENST00000465881 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
HNRNPU-206ENST00000465881 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
HNRNPU-206ENST00000465881 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
HNRNPU-206ENST00000465881 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
HNRNPU-206ENST00000465881 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
HNRNPU-206ENST00000465881 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.16
HNRNPU-206ENST00000465881 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-206ENST00000465881 KCNA4P22459 653 aa15.88■□□□□ 0.13
HNRNPU-206ENST00000465881 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
HNRNPU-206ENST00000465881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.071e-14■■■□□ 15.7
HNRNPU-206ENST00000465881 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
HNRNPU-206ENST00000465881 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
HNRNPU-206ENST00000465881 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
HNRNPU-206ENST00000465881 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
HNRNPU-206ENST00000465881 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
HNRNPU-206ENST00000465881 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
HNRNPU-206ENST00000465881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
HNRNPU-206ENST00000465881 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
HNRNPU-206ENST00000465881 APLP2Q06481 763 aa14.93□□□□□ -0.02
HNRNPU-206ENST00000465881 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
HNRNPU-206ENST00000465881 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
HNRNPU-206ENST00000465881 CAPN15O75808 1086 aa14.81□□□□□ -0.04
HNRNPU-206ENST00000465881 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
HNRNPU-206ENST00000465881 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
HNRNPU-206ENST00000465881 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
HNRNPU-206ENST00000465881 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
HNRNPU-206ENST00000465881 DSG3P32926 999 aa14.59□□□□□ -0.07
HNRNPU-206ENST00000465881 ZBTB22O15209 634 aa14.53□□□□□ -0.08
HNRNPU-206ENST00000465881 ABCB7O75027 752 aa14.43□□□□□ -0.1
HNRNPU-206ENST00000465881 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
HNRNPU-206ENST00000465881 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
HNRNPU-206ENST00000465881 POLA2Q14181 598 aa14.3□□□□□ -0.12
HNRNPU-206ENST00000465881 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
HNRNPU-206ENST00000465881 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
HNRNPU-206ENST00000465881 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
HNRNPU-206ENST00000465881 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
HNRNPU-206ENST00000465881 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
HNRNPU-206ENST00000465881 FBLN2P98095 1184 aa13.93□□□□□ -0.18
HNRNPU-206ENST00000465881 ABCC9O60706 1549 aa13.86□□□□□ -0.19
HNRNPU-206ENST00000465881 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
HNRNPU-206ENST00000465881 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
HNRNPU-206ENST00000465881 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
HNRNPU-206ENST00000465881 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
HNRNPU-206ENST00000465881 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
HNRNPU-206ENST00000465881 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
HNRNPU-206ENST00000465881 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-206ENST00000465881 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
HNRNPU-206ENST00000465881 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
HNRNPU-206ENST00000465881 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
HNRNPU-206ENST00000465881 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
HNRNPU-206ENST00000465881 POTEHQ6S545 545 aa13.52□□□□□ -0.25
HNRNPU-206ENST00000465881 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
HNRNPU-206ENST00000465881 NACADO15069 1562 aa13.49□□□□□ -0.25
HNRNPU-206ENST00000465881 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
HNRNPU-206ENST00000465881 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
HNRNPU-206ENST00000465881 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
HNRNPU-206ENST00000465881 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
HNRNPU-206ENST00000465881 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
HNRNPU-206ENST00000465881 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
HNRNPU-206ENST00000465881 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
HNRNPU-206ENST00000465881 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
HNRNPU-206ENST00000465881 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
HNRNPU-206ENST00000465881 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.299e-11■□□□□ 8.2
HNRNPU-206ENST00000465881 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
HNRNPU-206ENST00000465881 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
HNRNPU-206ENST00000465881 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
HNRNPU-206ENST00000465881 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
HNRNPU-206ENST00000465881 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
HNRNPU-206ENST00000465881 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
HNRNPU-206ENST00000465881 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
HNRNPU-206ENST00000465881 HAX1O00165 279 aa12.98□□□□□ -0.33
HNRNPU-206ENST00000465881 PROM2Q8N271 834 aa12.95□□□□□ -0.34
HNRNPU-206ENST00000465881 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
HNRNPU-206ENST00000465881 FKBP8Q14318 412 aa12.93□□□□□ -0.34
HNRNPU-206ENST00000465881 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
HNRNPU-206ENST00000465881 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-206ENST00000465881 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
HNRNPU-206ENST00000465881 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
HNRNPU-206ENST00000465881 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
HNRNPU-206ENST00000465881 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
HNRNPU-206ENST00000465881 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
HNRNPU-206ENST00000465881 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
HNRNPU-206ENST00000465881 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
HNRNPU-206ENST00000465881 EVX2Q03828 476 aa12.68□□□□□ -0.38
HNRNPU-206ENST00000465881 MIER1Q8N108 512 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms