RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-215ENST00000638589 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
HNRNPU-215ENST00000638589 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
HNRNPU-215ENST00000638589 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-215ENST00000638589 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
HNRNPU-215ENST00000638589 FOXD1Q16676 465 aa13.92□□□□□ -0.18
HNRNPU-215ENST00000638589 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
HNRNPU-215ENST00000638589 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
HNRNPU-215ENST00000638589 ADRA2BP18089 450 aa13.61□□□□□ -0.23
HNRNPU-215ENST00000638589 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
HNRNPU-215ENST00000638589 MSH5O43196 834 aa12.45□□□□□ -0.42
HNRNPU-215ENST00000638589 KCNA4P22459 653 aa12.41□□□□□ -0.42
HNRNPU-215ENST00000638589 MAPK8IP2Q13387 824 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-215ENST00000638589 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
HNRNPU-215ENST00000638589 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
HNRNPU-215ENST00000638589 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
HNRNPU-215ENST00000638589 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
HNRNPU-215ENST00000638589 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
HNRNPU-215ENST00000638589 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
HNRNPU-215ENST00000638589 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
HNRNPU-215ENST00000638589 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
HNRNPU-215ENST00000638589 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
HNRNPU-215ENST00000638589 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
HNRNPU-215ENST00000638589 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
HNRNPU-215ENST00000638589 ZBTB22O15209 634 aa11.52□□□□□ -0.56
HNRNPU-215ENST00000638589 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
HNRNPU-215ENST00000638589 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
HNRNPU-215ENST00000638589 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
HNRNPU-215ENST00000638589 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
HNRNPU-215ENST00000638589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.631e-14■■■□□ 15.7
HNRNPU-215ENST00000638589 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
HNRNPU-215ENST00000638589 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
HNRNPU-215ENST00000638589 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
HNRNPU-215ENST00000638589 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
HNRNPU-215ENST00000638589 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
HNRNPU-215ENST00000638589 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
HNRNPU-215ENST00000638589 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
HNRNPU-215ENST00000638589 CAPN15O75808 1086 aa10.66□□□□□ -0.7
HNRNPU-215ENST00000638589 ABCB7O75027 752 aa10.62□□□□□ -0.71
HNRNPU-215ENST00000638589 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
HNRNPU-215ENST00000638589 C1QBPQ07021 282 aaKnown RBP10.57□□□□□ -0.72
HNRNPU-215ENST00000638589 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
HNRNPU-215ENST00000638589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
HNRNPU-215ENST00000638589 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
HNRNPU-215ENST00000638589 POLA2Q14181 598 aa10.52□□□□□ -0.73
HNRNPU-215ENST00000638589 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
HNRNPU-215ENST00000638589 ATXN8OSP0DMR3 200 aa10.5□□□□□ -0.73
HNRNPU-215ENST00000638589 DSG3P32926 999 aa10.44□□□□□ -0.74
HNRNPU-215ENST00000638589 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
HNRNPU-215ENST00000638589 FKBP8Q14318 412 aa10.29□□□□□ -0.76
HNRNPU-215ENST00000638589 APLP2Q06481 763 aa10.24□□□□□ -0.77
HNRNPU-215ENST00000638589 OSCARQ8IYS5 282 aa10.21□□□□□ -0.78
HNRNPU-215ENST00000638589 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
HNRNPU-215ENST00000638589 FBLN2P98095 1184 aa10.05□□□□□ -0.8
HNRNPU-215ENST00000638589 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
HNRNPU-215ENST00000638589 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
HNRNPU-215ENST00000638589 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
HNRNPU-215ENST00000638589 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
HNRNPU-215ENST00000638589 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
HNRNPU-215ENST00000638589 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
HNRNPU-215ENST00000638589 SPDYE2Q495Y8 402 aa9.8□□□□□ -0.84
HNRNPU-215ENST00000638589 PROM2Q8N271 834 aa9.79□□□□□ -0.84
HNRNPU-215ENST00000638589 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
HNRNPU-215ENST00000638589 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-215ENST00000638589 PITPNM1O00562 1244 aa9.66□□□□□ -0.86
HNRNPU-215ENST00000638589 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
HNRNPU-215ENST00000638589 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-215ENST00000638589 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
HNRNPU-215ENST00000638589 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-215ENST00000638589 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
HNRNPU-215ENST00000638589 AKT1S1Q96B36 256 aa9.62□□□□□ -0.87
HNRNPU-215ENST00000638589 MIER1Q8N108 512 aa9.56□□□□□ -0.88
HNRNPU-215ENST00000638589 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.88
HNRNPU-215ENST00000638589 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
HNRNPU-215ENST00000638589 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
HNRNPU-215ENST00000638589 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
HNRNPU-215ENST00000638589 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
HNRNPU-215ENST00000638589 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
HNRNPU-215ENST00000638589 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
HNRNPU-215ENST00000638589 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
HNRNPU-215ENST00000638589 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
HNRNPU-215ENST00000638589 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.91
HNRNPU-215ENST00000638589 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
HNRNPU-215ENST00000638589 PKD2Q13563 968 aa9.36□□□□□ -0.91
HNRNPU-215ENST00000638589 RASEFQ8IZ41 740 aa9.34□□□□□ -0.91
HNRNPU-215ENST00000638589 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.929e-11■□□□□ 8.2
HNRNPU-215ENST00000638589 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
HNRNPU-215ENST00000638589 NUBP1P53384 320 aa9.29□□□□□ -0.92
HNRNPU-215ENST00000638589 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-215ENST00000638589 FARP1Q9Y4F1 1045 aaPredicted RBP9.29□□□□□ -0.92
HNRNPU-215ENST00000638589 EVX2Q03828 476 aa9.28□□□□□ -0.92
HNRNPU-215ENST00000638589 SPOCK2Q92563 424 aa9.27□□□□□ -0.93
HNRNPU-215ENST00000638589 AMER1Q5JTC6 1135 aaPredicted RBP9.24□□□□□ -0.93
HNRNPU-215ENST00000638589 PYGBP11216 843 aa9.23□□□□□ -0.93
HNRNPU-215ENST00000638589 RGL2O15211 777 aa9.23□□□□□ -0.93
HNRNPU-215ENST00000638589 RNF25Q96BH1 459 aaPredicted RBP9.21□□□□□ -0.93
HNRNPU-215ENST00000638589 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.94
HNRNPU-215ENST00000638589 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
HNRNPU-215ENST00000638589 PLEKHG5O94827 1062 aa9.2□□□□□ -0.94
HNRNPU-215ENST00000638589 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-215ENST00000638589 PHF12Q96QT6 1004 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms