RNA–Protein interactions for RNA: ENST00000481133.1

ZCCHC11-212, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 3

Gene ZCCHC11, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-212ENST00000481133 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
ZCCHC11-212ENST00000481133 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
ZCCHC11-212ENST00000481133 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
ZCCHC11-212ENST00000481133 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
ZCCHC11-212ENST00000481133 FOXD1Q16676 465 aa22.05■■□□□ 1.12
ZCCHC11-212ENST00000481133 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
ZCCHC11-212ENST00000481133 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
ZCCHC11-212ENST00000481133 ADRA2BP18089 450 aa20.69■□□□□ 0.9
ZCCHC11-212ENST00000481133 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
ZCCHC11-212ENST00000481133 MSH5O43196 834 aa20.68■□□□□ 0.9
ZCCHC11-212ENST00000481133 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
ZCCHC11-212ENST00000481133 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
ZCCHC11-212ENST00000481133 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
ZCCHC11-212ENST00000481133 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
ZCCHC11-212ENST00000481133 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
ZCCHC11-212ENST00000481133 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
ZCCHC11-212ENST00000481133 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
ZCCHC11-212ENST00000481133 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
ZCCHC11-212ENST00000481133 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
ZCCHC11-212ENST00000481133 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
ZCCHC11-212ENST00000481133 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
ZCCHC11-212ENST00000481133 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
ZCCHC11-212ENST00000481133 KCNA4P22459 653 aa17.65■□□□□ 0.42
ZCCHC11-212ENST00000481133 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
ZCCHC11-212ENST00000481133 CACNB1Q02641 598 aaPredicted RBP17.55■□□□□ 0.4
ZCCHC11-212ENST00000481133 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
ZCCHC11-212ENST00000481133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZCCHC11-212ENST00000481133 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
ZCCHC11-212ENST00000481133 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
ZCCHC11-212ENST00000481133 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
ZCCHC11-212ENST00000481133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
ZCCHC11-212ENST00000481133 APLP2Q06481 763 aa16.75■□□□□ 0.27
ZCCHC11-212ENST00000481133 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
ZCCHC11-212ENST00000481133 CAPN15O75808 1086 aa16.67■□□□□ 0.26
ZCCHC11-212ENST00000481133 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
ZCCHC11-212ENST00000481133 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
ZCCHC11-212ENST00000481133 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
ZCCHC11-212ENST00000481133 DSG3P32926 999 aa16.54■□□□□ 0.24
ZCCHC11-212ENST00000481133 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
ZCCHC11-212ENST00000481133 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
ZCCHC11-212ENST00000481133 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
ZCCHC11-212ENST00000481133 ABCB7O75027 752 aa16.25■□□□□ 0.19
ZCCHC11-212ENST00000481133 ZBTB22O15209 634 aa16.2■□□□□ 0.18
ZCCHC11-212ENST00000481133 POLA2Q14181 598 aa16.06■□□□□ 0.16
ZCCHC11-212ENST00000481133 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
ZCCHC11-212ENST00000481133 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
ZCCHC11-212ENST00000481133 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
ZCCHC11-212ENST00000481133 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
ZCCHC11-212ENST00000481133 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
ZCCHC11-212ENST00000481133 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
ZCCHC11-212ENST00000481133 FBLN2P98095 1184 aa15.54■□□□□ 0.08
ZCCHC11-212ENST00000481133 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
ZCCHC11-212ENST00000481133 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
ZCCHC11-212ENST00000481133 POTEHQ6S545 545 aa15.51■□□□□ 0.07
ZCCHC11-212ENST00000481133 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
ZCCHC11-212ENST00000481133 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
ZCCHC11-212ENST00000481133 SPDYE2Q495Y8 402 aa15.37■□□□□ 0.05
ZCCHC11-212ENST00000481133 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
ZCCHC11-212ENST00000481133 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
ZCCHC11-212ENST00000481133 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
ZCCHC11-212ENST00000481133 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
ZCCHC11-212ENST00000481133 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
ZCCHC11-212ENST00000481133 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
ZCCHC11-212ENST00000481133 SPDYE1Q8NFV5 336 aaPredicted RBP15.04■□□□□ -0
ZCCHC11-212ENST00000481133 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
ZCCHC11-212ENST00000481133 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
ZCCHC11-212ENST00000481133 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
ZCCHC11-212ENST00000481133 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
ZCCHC11-212ENST00000481133 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
ZCCHC11-212ENST00000481133 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
ZCCHC11-212ENST00000481133 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
ZCCHC11-212ENST00000481133 HAX1O00165 279 aa14.69□□□□□ -0.06
ZCCHC11-212ENST00000481133 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
ZCCHC11-212ENST00000481133 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
ZCCHC11-212ENST00000481133 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
ZCCHC11-212ENST00000481133 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
ZCCHC11-212ENST00000481133 PROM2Q8N271 834 aa14.5□□□□□ -0.09
ZCCHC11-212ENST00000481133 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
ZCCHC11-212ENST00000481133 EVX2Q03828 476 aa14.44□□□□□ -0.1
ZCCHC11-212ENST00000481133 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
ZCCHC11-212ENST00000481133 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
ZCCHC11-212ENST00000481133 CLCN6P51797 869 aa14.25□□□□□ -0.13
ZCCHC11-212ENST00000481133 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
ZCCHC11-212ENST00000481133 FKBP8Q14318 412 aa14.22□□□□□ -0.13
ZCCHC11-212ENST00000481133 GABBR2O75899 941 aa14.21□□□□□ -0.13
ZCCHC11-212ENST00000481133 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
ZCCHC11-212ENST00000481133 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
ZCCHC11-212ENST00000481133 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
ZCCHC11-212ENST00000481133 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
ZCCHC11-212ENST00000481133 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
ZCCHC11-212ENST00000481133 MIER1Q8N108 512 aa14.07□□□□□ -0.16
ZCCHC11-212ENST00000481133 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
ZCCHC11-212ENST00000481133 FBXO3Q9UK99 471 aa14□□□□□ -0.17
ZCCHC11-212ENST00000481133 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
ZCCHC11-212ENST00000481133 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
ZCCHC11-212ENST00000481133 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
ZCCHC11-212ENST00000481133 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
ZCCHC11-212ENST00000481133 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
ZCCHC11-212ENST00000481133 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
ZCCHC11-212ENST00000481133 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms