RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	NISCH	Q9Y2I1	1504 aa		42.43	■■■■■ 4.38
SUN1-233	ENST00000488628	CCDC180	Q9P1Z9	1646 aa		37.9	■■■■□ 3.66
SUN1-233	ENST00000488628	ABCC9	O60706	1549 aa		37.65	■■■■□ 3.62
SUN1-233	ENST00000488628	RB1CC1	Q8TDY2	1594 aa		35.9	■■■■□ 3.34
SUN1-233	ENST00000488628	NACAD	O15069	1562 aa		35.74	■■■■□ 3.31
SUN1-233	ENST00000488628	DCAF8L2	P0C7V8	631 aa		35.71	■■■■□ 3.31
SUN1-233	ENST00000488628	MYO15B	Q96JP2	1530 aa		35.32	■■■■□ 3.25
SUN1-233	ENST00000488628	UNC13A	Q9UPW8	1703 aa		35.24	■■■■□ 3.23
SUN1-233	ENST00000488628	ZCCHC6	Q5VYS8	1495 aa	Known RBP	35.22	■■■■□ 3.23
SUN1-233	ENST00000488628	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.13	■■■■□ 3.21
SUN1-233	ENST00000488628	DNAJC5B	Q9UF47	199 aa		35.09	■■■■□ 3.21
SUN1-233	ENST00000488628	DCAF1	Q9Y4B6	1507 aa		35.01	■■■■□ 3.2
SUN1-233	ENST00000488628	BICRA	Q9NZM4	1560 aa		34.94	■■■■□ 3.18
SUN1-233	ENST00000488628	SCRIB	Q14160	1630 aa		34.63	■■■■□ 3.13
SUN1-233	ENST00000488628	SHROOM4	Q9ULL8	1493 aa		34.33	■■■■□ 3.09
SUN1-233	ENST00000488628	CC2D2A	Q9P2K1	1620 aa		34.02	■■■■□ 3.04
SUN1-233	ENST00000488628	EIF4G1	Q04637	1599 aa	Known RBP	34.01	■■■■□ 3.03
SUN1-233	ENST00000488628	CECR2	Q9BXF3	1484 aa		33.83	■■■■□ 3.01
SUN1-233	ENST00000488628	SMARCA4	P51532	1647 aa		33.04	■■■□□ 2.88
SUN1-233	ENST00000488628	NCAPD3	P42695	1498 aa		33	■■■□□ 2.87
SUN1-233	ENST00000488628	ATAD2B	Q9ULI0	1458 aa		32.99	■■■□□ 2.87
SUN1-233	ENST00000488628	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.87	■■■□□ 2.85
SUN1-233	ENST00000488628	SMARCA2	P51531	1590 aa		32.86	■■■□□ 2.85
SUN1-233	ENST00000488628	HMGXB3	Q12766	1538 aa		32.77	■■■□□ 2.84
SUN1-233	ENST00000488628	MROH2B	Q7Z745	1585 aa		32.75	■■■□□ 2.83
SUN1-233	ENST00000488628	PEG3	Q9GZU2	1588 aa		32.69	■■■□□ 2.82
SUN1-233	ENST00000488628	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.66	■■■□□ 2.82
SUN1-233	ENST00000488628	NES	P48681	1621 aa		32.47	■■■□□ 2.79
SUN1-233	ENST00000488628	ERCC6	Q03468	1493 aa		32.41	■■■□□ 2.78
SUN1-233	ENST00000488628	WIZ	O95785	1651 aa		32.39	■■■□□ 2.78
SUN1-233	ENST00000488628	CUX2	O14529	1486 aa		32.22	■■■□□ 2.75
SUN1-233	ENST00000488628	LAMC3	Q9Y6N6	1575 aa		32.19	■■■□□ 2.74
SUN1-233	ENST00000488628	RSF1	Q96T23	1441 aa	Predicted RBP	32.17	■■■□□ 2.74
SUN1-233	ENST00000488628	KIF21A	Q7Z4S6	1674 aa		32.06	■■■□□ 2.72
SUN1-233	ENST00000488628	THOC2	Q8NI27	1593 aa	Known RBP	32.03	■■■□□ 2.72
SUN1-233	ENST00000488628	CADPS	Q9ULU8	1353 aa		32.02	■■■□□ 2.72
SUN1-233	ENST00000488628	PDS5B	Q9NTI5	1447 aa		31.98	■■■□□ 2.71
SUN1-233	ENST00000488628	TOP2A	P11388	1531 aa	Known RBP	31.93	■■■□□ 2.7
SUN1-233	ENST00000488628	DNAJC5	Q9H3Z4	198 aa		31.88	■■■□□ 2.69
SUN1-233	ENST00000488628	CFTR	P13569	1480 aa		31.73	■■■□□ 2.67
SUN1-233	ENST00000488628	MRC2	Q9UBG0	1479 aa		31.72	■■■□□ 2.67
SUN1-233	ENST00000488628	FANCD2	Q9BXW9	1451 aa		31.67	■■■□□ 2.66
SUN1-233	ENST00000488628	CEP164	Q9UPV0	1460 aa		31.65	■■■□□ 2.66
SUN1-233	ENST00000488628	WDR62	O43379	1518 aa		31.64	■■■□□ 2.66
SUN1-233	ENST00000488628	CCDC88B	A6NC98	1476 aa		31.6	■■■□□ 2.65
SUN1-233	ENST00000488628	PRDM2	Q13029	1718 aa		31.49	■■■□□ 2.63
SUN1-233	ENST00000488628	URB2	Q14146	1524 aa	Known RBP	31.43	■■■□□ 2.62
SUN1-233	ENST00000488628	TOPBP1	Q92547	1522 aa		31.13	■■■□□ 2.57
SUN1-233	ENST00000488628	DNMBP	Q6XZF7	1577 aa		31.02	■■■□□ 2.56
SUN1-233	ENST00000488628	SUPT5H	O00267	1087 aa	Known RBP	31.02	■■■□□ 2.56
SUN1-233	ENST00000488628	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31	■■■□□ 2.55
SUN1-233	ENST00000488628	IFT140	Q96RY7	1462 aa		31	■■■□□ 2.55
SUN1-233	ENST00000488628	ABCC8	Q09428	1581 aa		31	■■■□□ 2.55
SUN1-233	ENST00000488628	TARBP1	Q13395	1621 aa	Known RBP	30.84	■■■□□ 2.53
SUN1-233	ENST00000488628	OSCAR	Q8IYS5	282 aa		30.83	■■■□□ 2.53
SUN1-233	ENST00000488628	POLA1	P09884	1462 aa	Predicted RBP	30.82	■■■□□ 2.53
SUN1-233	ENST00000488628	EIF4G3	O43432	1585 aa	Known RBP	30.81	■■■□□ 2.52
SUN1-233	ENST00000488628	AQR	O60306	1485 aa	Known RBP eCLIP	30.76	■■■□□ 2.51	8e-11	■■■□□ 17.6
SUN1-233	ENST00000488628	RAD54L2	Q9Y4B4	1467 aa		30.75	■■■□□ 2.51
SUN1-233	ENST00000488628	CUX1	P39880	1505 aa		30.73	■■■□□ 2.51
SUN1-233	ENST00000488628	FGD5	Q6ZNL6	1462 aa		30.69	■■■□□ 2.5
SUN1-233	ENST00000488628	SOGA1	O94964	1423 aa		30.68	■■■□□ 2.5
SUN1-233	ENST00000488628	TRIM41	Q8WV44	630 aa		30.66	■■■□□ 2.5
SUN1-233	ENST00000488628	TDRD9	Q8NDG6	1382 aa	Known RBP	30.61	■■■□□ 2.49
SUN1-233	ENST00000488628	CHD1	O14646	1710 aa		30.56	■■■□□ 2.48
SUN1-233	ENST00000488628	WDR97	A6NE52	1622 aa		30.47	■■■□□ 2.47
SUN1-233	ENST00000488628	RIMBP3C	A6NJZ7	1639 aa		30.45	■■■□□ 2.47
SUN1-233	ENST00000488628	RIMBP3B	A6NNM3	1639 aa		30.45	■■■□□ 2.47
SUN1-233	ENST00000488628	RIMBP3	Q9UFD9	1639 aa		30.45	■■■□□ 2.47
SUN1-233	ENST00000488628	FBLN2	P98095	1184 aa		30.45	■■■□□ 2.47
SUN1-233	ENST00000488628	SNAPC4	Q5SXM2	1469 aa		30.42	■■■□□ 2.46
SUN1-233	ENST00000488628	ARHGEF11	O15085	1522 aa		30.36	■■■□□ 2.45
SUN1-233	ENST00000488628	GRIN2B	Q13224	1484 aa		30.35	■■■□□ 2.45
SUN1-233	ENST00000488628	ABCA10	Q8WWZ4	1543 aa		30.33	■■■□□ 2.45
SUN1-233	ENST00000488628	PBRM1	Q86U86	1689 aa		30.32	■■■□□ 2.44
SUN1-233	ENST00000488628	SYNJ1	O43426	1573 aa		30.32	■■■□□ 2.44
SUN1-233	ENST00000488628	BIVM-ERCC5	R4GMW8	1640 aa		30.31	■■■□□ 2.44
SUN1-233	ENST00000488628	GAPVD1	Q14C86	1478 aa		30.31	■■■□□ 2.44
SUN1-233	ENST00000488628	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.31	■■■□□ 2.44
SUN1-233	ENST00000488628	TOP2B	Q02880	1626 aa		30.3	■■■□□ 2.44
SUN1-233	ENST00000488628	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.3	■■■□□ 2.44
SUN1-233	ENST00000488628	ABCA5	Q8WWZ7	1642 aa		30.29	■■■□□ 2.44
SUN1-233	ENST00000488628	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.26	■■■□□ 2.43
SUN1-233	ENST00000488628	SYNJ2	O15056	1496 aa		30.21	■■■□□ 2.43
SUN1-233	ENST00000488628	CLASP1	Q7Z460	1538 aa		30.17	■■■□□ 2.42
SUN1-233	ENST00000488628	CYB5RL	Q6IPT4	315 aa		30.14	■■■□□ 2.42
SUN1-233	ENST00000488628	ARAP1	Q96P48	1450 aa		30.11	■■■□□ 2.41
SUN1-233	ENST00000488628	ADAMTS12	P58397	1594 aa		30.03	■■■□□ 2.4
SUN1-233	ENST00000488628	GRIN2A	Q12879	1464 aa		29.98	■■■□□ 2.39
SUN1-233	ENST00000488628	ERICH3	Q5RHP9	1530 aa		29.94	■■■□□ 2.38
SUN1-233	ENST00000488628	FHAD1	B1AJZ9	1412 aa		29.92	■■■□□ 2.38
SUN1-233	ENST00000488628	CEP170	Q5SW79	1584 aa		29.9	■■■□□ 2.38
SUN1-233	ENST00000488628	NUP160	Q12769	1436 aa		29.87	■■■□□ 2.37
SUN1-233	ENST00000488628	ERCC6L2	Q5T890	1561 aa		29.81	■■■□□ 2.36
SUN1-233	ENST00000488628	SHROOM2	Q13796	1616 aa		29.71	■■■□□ 2.35
SUN1-233	ENST00000488628	IGF1R	P08069	1367 aa		29.69	■■■□□ 2.34
SUN1-233	ENST00000488628	KIF27	Q86VH2	1401 aa		29.68	■■■□□ 2.34
SUN1-233	ENST00000488628	TRH	P20396	242 aa	Predicted RBP	29.66	■■■□□ 2.34
SUN1-233	ENST00000488628	RUSC2	Q8N2Y8	1516 aa		29.59	■■■□□ 2.33
SUN1-233	ENST00000488628	JPH4	Q96JJ6	628 aa		29.58	■■■□□ 2.33

Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms