RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-208ENST00000480994 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
NECAB3-208ENST00000480994 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
NECAB3-208ENST00000480994 ABCC9O60706 1549 aa36.6■■■■□ 3.45
NECAB3-208ENST00000480994 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
NECAB3-208ENST00000480994 NACADO15069 1562 aa35.21■■■■□ 3.23
NECAB3-208ENST00000480994 MYO15BQ96JP2 1530 aa34.98■■■■□ 3.19
NECAB3-208ENST00000480994 ZCCHC6Q5VYS8 1495 aaKnown RBP34.85■■■■□ 3.17
NECAB3-208ENST00000480994 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
NECAB3-208ENST00000480994 UNC13AQ9UPW8 1703 aa34.67■■■■□ 3.14
NECAB3-208ENST00000480994 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
NECAB3-208ENST00000480994 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
NECAB3-208ENST00000480994 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.047e-9■■□□□ 11.9
NECAB3-208ENST00000480994 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
NECAB3-208ENST00000480994 SHROOM4Q9ULL8 1493 aa33.96■■■■□ 3.03
NECAB3-208ENST00000480994 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
NECAB3-208ENST00000480994 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
NECAB3-208ENST00000480994 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
NECAB3-208ENST00000480994 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
NECAB3-208ENST00000480994 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
NECAB3-208ENST00000480994 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
NECAB3-208ENST00000480994 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
NECAB3-208ENST00000480994 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
NECAB3-208ENST00000480994 ATAD2BQ9ULI0 1458 aa32.37■■■□□ 2.77
NECAB3-208ENST00000480994 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
NECAB3-208ENST00000480994 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
NECAB3-208ENST00000480994 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
NECAB3-208ENST00000480994 BAZ1BQ9UIG0 1483 aaKnown RBP32.09■■■□□ 2.73
NECAB3-208ENST00000480994 WIZO95785 1651 aa31.9■■■□□ 2.7
NECAB3-208ENST00000480994 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
NECAB3-208ENST00000480994 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
NECAB3-208ENST00000480994 NESP48681 1621 aa31.64■■■□□ 2.65
NECAB3-208ENST00000480994 ERCC6Q03468 1493 aa31.59■■■□□ 2.65
NECAB3-208ENST00000480994 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
NECAB3-208ENST00000480994 CUX2O14529 1486 aa31.46■■■□□ 2.63
NECAB3-208ENST00000480994 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
NECAB3-208ENST00000480994 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
NECAB3-208ENST00000480994 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
NECAB3-208ENST00000480994 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
NECAB3-208ENST00000480994 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
NECAB3-208ENST00000480994 CFTRP13569 1480 aa31.22■■■□□ 2.59
NECAB3-208ENST00000480994 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
NECAB3-208ENST00000480994 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
NECAB3-208ENST00000480994 WDR62O43379 1518 aa31.07■■■□□ 2.56
NECAB3-208ENST00000480994 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
NECAB3-208ENST00000480994 FANCD2Q9BXW9 1451 aa31.06■■■□□ 2.56
NECAB3-208ENST00000480994 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
NECAB3-208ENST00000480994 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
NECAB3-208ENST00000480994 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
NECAB3-208ENST00000480994 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
NECAB3-208ENST00000480994 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
NECAB3-208ENST00000480994 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
NECAB3-208ENST00000480994 IFT140Q96RY7 1462 aa30.43■■■□□ 2.46
NECAB3-208ENST00000480994 TARBP1Q13395 1621 aaKnown RBP30.34■■■□□ 2.45
NECAB3-208ENST00000480994 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
NECAB3-208ENST00000480994 EIF4G3O43432 1585 aaKnown RBP30.27■■■□□ 2.44
NECAB3-208ENST00000480994 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
NECAB3-208ENST00000480994 CUX1P39880 1505 aa30.25■■■□□ 2.43
NECAB3-208ENST00000480994 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
NECAB3-208ENST00000480994 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
NECAB3-208ENST00000480994 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
NECAB3-208ENST00000480994 BIVM-ERCC5R4GMW8 1640 aa30.06■■■□□ 2.4
NECAB3-208ENST00000480994 SOGA1O94964 1423 aa30.05■■■□□ 2.4
NECAB3-208ENST00000480994 TOP2BQ02880 1626 aa30■■■□□ 2.39
NECAB3-208ENST00000480994 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.394e-8■■■■■ 28.5
NECAB3-208ENST00000480994 CHD1O14646 1710 aa29.98■■■□□ 2.39
NECAB3-208ENST00000480994 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
NECAB3-208ENST00000480994 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
NECAB3-208ENST00000480994 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
NECAB3-208ENST00000480994 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
NECAB3-208ENST00000480994 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
NECAB3-208ENST00000480994 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
NECAB3-208ENST00000480994 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
NECAB3-208ENST00000480994 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
NECAB3-208ENST00000480994 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
NECAB3-208ENST00000480994 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
NECAB3-208ENST00000480994 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
NECAB3-208ENST00000480994 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
NECAB3-208ENST00000480994 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
NECAB3-208ENST00000480994 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
NECAB3-208ENST00000480994 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
NECAB3-208ENST00000480994 FBLN2P98095 1184 aa29.53■■■□□ 2.32
NECAB3-208ENST00000480994 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
NECAB3-208ENST00000480994 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
NECAB3-208ENST00000480994 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
NECAB3-208ENST00000480994 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
NECAB3-208ENST00000480994 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
NECAB3-208ENST00000480994 NUP160Q12769 1436 aa29.35■■■□□ 2.29
NECAB3-208ENST00000480994 CUL7Q14999 1698 aa29.33■■■□□ 2.29
NECAB3-208ENST00000480994 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
NECAB3-208ENST00000480994 KIF27Q86VH2 1401 aa29.29■■■□□ 2.28
NECAB3-208ENST00000480994 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
NECAB3-208ENST00000480994 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
NECAB3-208ENST00000480994 IGF1RP08069 1367 aa29.16■■■□□ 2.26
NECAB3-208ENST00000480994 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
NECAB3-208ENST00000480994 ERCC6L2Q5T890 1561 aa29.08■■■□□ 2.25
NECAB3-208ENST00000480994 CARMIL1Q5VZK9 1371 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms