Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ACP6-206ENST00000609196 1874 ntTSL 310.39□□□□□ -0.752e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-208ENST00000613673 4564 ntTSL 1 (best)10.08□□□□□ -0.82e-10■■□□□ 12.3
PRPF8Q6P2Q9 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.852e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-204ENST00000493129 543 ntTSL 59.37□□□□□ -0.912e-10■■□□□ 12.3
PRPF8Q6P2Q9 HM13-216ENST00000479096 598 ntTSL 39.22□□□□□ -0.932e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-207ENST00000611629 562 ntTSL 49.13□□□□□ -0.952e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.062e-10■■□□□ 12.3
PRPF8Q6P2Q9 AC096887.1-201ENST00000607495 823 ntAPPRIS ALT2 TSL 57.44□□□□□ -1.222e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-209ENST00000614551 672 ntTSL 36.68□□□□□ -1.342e-10■■□□□ 12.3
PRPF8Q6P2Q9 MCTS2P-201ENST00000394552 546 ntBASIC1.3□□□□□ -2.22e-10■■□□□ 12.3
PRPF8Q6P2Q9 C5orf24-205ENST00000507390 269 ntTSL 20.1□□□□□ -2.392e-10■■□□□ 12.3
PRPF8Q6P2Q9 snoU18.1-201ENST00000629629 71 ntBASIC-2.5□□□□□ -2.812e-10■■□□□ 12.3
PRPF8Q6P2Q9 SNORD18B-201ENST00000365659 72 ntBASIC-2.54□□□□□ -2.822e-10■■□□□ 12.3
PRPF8Q6P2Q9 CSNK1E-212ENST00000494610 539 ntTSL 210.44□□□□□ -0.742e-14■■□□□ 12.3
PRPF8Q6P2Q9 FAM117A-202ENST00000503573 776 ntTSL 59.18□□□□□ -0.943e-8■■□□□ 12.3
PRPF8Q6P2Q9 TEAD4-208ENST00000544666 567 ntTSL 510.46□□□□□ -0.745e-7■■□□□ 12.3
PRPF8Q6P2Q9 FOXK2-204ENST00000527313 779 ntTSL 317.6■□□□□ 0.411e-10■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-203ENST00000424959 946 ntTSL 516.14■□□□□ 0.173e-7■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.01■□□□□ 0.153e-7■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.5■□□□□ 0.073e-7■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-206ENST00000495589 935 ntTSL 514.16□□□□□ -0.143e-7■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.143e-7■■□□□ 12.3
PRPF8Q6P2Q9 FOXK2-207ENST00000570585 756 ntTSL 312.02□□□□□ -0.491e-10■■□□□ 12.3
PRPF8Q6P2Q9 MTX1-204ENST00000481771 2579 ntTSL 211.52□□□□□ -0.573e-7■■□□□ 12.3
PRPF8Q6P2Q9 AGRN-208ENST00000479707 584 ntTSL 315.81■□□□□ 0.125e-8■■□□□ 12.3
PRPF8Q6P2Q9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-7■■□□□ 12.3
PRPF8Q6P2Q9 HLF-202ENST00000430986 1385 ntTSL 2 BASIC11.2□□□□□ -0.622e-7■■□□□ 12.3
PRPF8Q6P2Q9 HLF-208ENST00000573945 2977 ntTSL 5 BASIC7.72□□□□□ -1.172e-7■■□□□ 12.3
PRPF8Q6P2Q9 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.15□□□□□ -1.427e-7■■□□□ 12.3
PRPF8Q6P2Q9 TRMU-210ENST00000470831 1860 ntTSL 212.99□□□□□ -0.333e-7■■□□□ 12.3
PRPF8Q6P2Q9 PPP1R10-205ENST00000476704 559 ntTSL 37.43□□□□□ -1.227e-7■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.915e-12■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-203ENST00000571351 1678 ntTSL 216.83■□□□□ 0.295e-12■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-205ENST00000574699 583 ntTSL 216.61■□□□□ 0.255e-12■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.61■□□□□ 0.255e-12■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.91□□□□□ -0.345e-12■■□□□ 12.3
PRPF8Q6P2Q9 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC11.48□□□□□ -0.575e-12■■□□□ 12.3
PRPF8Q6P2Q9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.6□□□□□ -0.073e-7■■□□□ 12.3
PRPF8Q6P2Q9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.33□□□□□ -0.283e-7■■□□□ 12.3
PRPF8Q6P2Q9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.383e-7■■□□□ 12.3
PRPF8Q6P2Q9 FADS1-210ENST00000496123 693 ntTSL 59.37□□□□□ -0.913e-7■■□□□ 12.3
PRPF8Q6P2Q9 HES6-209ENST00000450098 530 ntTSL 329.04■■■□□ 2.242e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.4■■□□□ 1.822e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.61■■□□□ 1.052e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-208ENST00000436051 512 ntTSL 320.65■□□□□ 0.92e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.38■□□□□ 0.852e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.612e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.71■□□□□ 0.592e-8■■□□□ 12.3
PRPF8Q6P2Q9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.542e-8■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-220ENST00000559354 547 ntTSL 412.12□□□□□ -0.472e-15■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-209ENST00000557952 444 ntTSL 59.35□□□□□ -0.912e-15■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-230ENST00000560459 587 ntTSL 49.32□□□□□ -0.922e-15■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-219ENST00000559288 575 ntTSL 47.29□□□□□ -1.242e-15■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-211ENST00000558408 592 ntTSL 25.93□□□□□ -1.462e-15■■□□□ 12.3
PRPF8Q6P2Q9 CSNK1E-215ENST00000612795 885 ntTSL 215.42■□□□□ 0.065e-7■■□□□ 12.3
PRPF8Q6P2Q9 DEF8-214ENST00000564379 2354 ntTSL 215.7■□□□□ 0.13e-7■■□□□ 12.3
PRPF8Q6P2Q9 DEF8-207ENST00000562163 473 ntTSL 413.06□□□□□ -0.323e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-209ENST00000581411 900 ntAPPRIS ALT2 TSL 323.98■■□□□ 1.434e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.324e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-208ENST00000580183 824 ntAPPRIS ALT2 TSL 515.56■□□□□ 0.084e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-210ENST00000582829 805 ntAPPRIS ALT2 TSL 515.36■□□□□ 0.054e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-205ENST00000578749 1050 ntAPPRIS ALT2 TSL 314.7□□□□□ -0.064e-7■■□□□ 12.3
PRPF8Q6P2Q9 TP53I13-203ENST00000577934 664 ntTSL 313.97□□□□□ -0.174e-7■■□□□ 12.3
PRPF8Q6P2Q9 SFXN3-205ENST00000470252 2541 ntTSL 29.7□□□□□ -0.864e-7■■□□□ 12.3
PRPF8Q6P2Q9 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.54□□□□□ -1.844e-7■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.691e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-207ENST00000473699 1027 ntTSL 312.97□□□□□ -0.331e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-211ENST00000484320 1148 ntTSL 511.91□□□□□ -0.51e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-209ENST00000480176 1040 ntTSL 210.9□□□□□ -0.671e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-206ENST00000472898 711 ntTSL 28.72□□□□□ -1.011e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-218ENST00000532074 1008 ntTSL 58.72□□□□□ -1.011e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-213ENST00000496742 825 ntTSL 3 BASIC7.62□□□□□ -1.191e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-203ENST00000466905 666 ntTSL 57.56□□□□□ -1.21e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-208ENST00000474377 639 ntTSL 57.43□□□□□ -1.221e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.241e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7□□□□□ -1.291e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-216ENST00000531790 476 ntTSL 56.39□□□□□ -1.391e-6■■□□□ 12.3
PRPF8Q6P2Q9 SSR2-202ENST00000368311 5166 ntTSL 1 (best)5.85□□□□□ -1.471e-6■■□□□ 12.3
PRPF8Q6P2Q9 FLOT1-211ENST00000484693 1001 ntTSL 216.66■□□□□ 0.262e-9■■□□□ 12.3
PRPF8Q6P2Q9 PPIL2-207ENST00000462188 1735 ntTSL 213.41□□□□□ -0.265e-10■■□□□ 12.3
PRPF8Q6P2Q9 GNB1-205ENST00000461893 2438 ntTSL 211.8□□□□□ -0.522e-7■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.4■□□□□ 0.381e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-222ENST00000637667 874 ntTSL 1 (best)17.39■□□□□ 0.371e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.08■□□□□ 0.321e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.281e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-224ENST00000638076 2323 ntTSL 1 (best)16.46■□□□□ 0.221e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-213ENST00000636212 1053 ntTSL 516.11■□□□□ 0.171e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.11■□□□□ 0.171e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.96■□□□□ 0.151e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-220ENST00000637450 868 ntTSL 315.96■□□□□ 0.151e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.82■□□□□ 0.121e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-210ENST00000635747 1181 ntTSL 515.56■□□□□ 0.081e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.24□□□□□ -0.131e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-218ENST00000637223 652 ntTSL 514.16□□□□□ -0.141e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-208ENST00000567060 945 ntTSL 213.95□□□□□ -0.181e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-219ENST00000637329 1204 ntTSL 512.27□□□□□ -0.441e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-225ENST00000638144 576 ntTSL 510.66□□□□□ -0.71e-6■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-223ENST00000637823 717 ntTSL 59.55□□□□□ -0.881e-6■■□□□ 12.3
PRPF8Q6P2Q9 DDB1-224ENST00000545894 2282 ntTSL 28.58□□□□□ -1.041e-10■■□□□ 12.3
PRPF8Q6P2Q9 CLN6-203ENST00000563917 557 ntTSL 58.2□□□□□ -1.11e-6■■□□□ 12.3
Retrieved 100 of 73,762 protein–RNA pairs in 1073.9 ms