RNA–Protein interactions for RNA: ENST00000626285.1

PDAP1-205, Transcript of PDGFA associated protein 1, humanhuman

TSL 5 BASIC

Gene PDAP1, Length 120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-205ENST00000626285 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
PDAP1-205ENST00000626285 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
PDAP1-205ENST00000626285 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PDAP1-205ENST00000626285 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
PDAP1-205ENST00000626285 NACADO15069 1562 aa15.13■□□□□ 0.01
PDAP1-205ENST00000626285 MYO15BQ96JP2 1530 aa14.98□□□□□ -0.01
PDAP1-205ENST00000626285 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
PDAP1-205ENST00000626285 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
PDAP1-205ENST00000626285 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
PDAP1-205ENST00000626285 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
PDAP1-205ENST00000626285 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
PDAP1-205ENST00000626285 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
PDAP1-205ENST00000626285 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
PDAP1-205ENST00000626285 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
PDAP1-205ENST00000626285 SCRIBQ14160 1630 aa14.52□□□□□ -0.08
PDAP1-205ENST00000626285 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
PDAP1-205ENST00000626285 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
PDAP1-205ENST00000626285 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
PDAP1-205ENST00000626285 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
PDAP1-205ENST00000626285 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
PDAP1-205ENST00000626285 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
PDAP1-205ENST00000626285 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
PDAP1-205ENST00000626285 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
PDAP1-205ENST00000626285 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.19
PDAP1-205ENST00000626285 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
PDAP1-205ENST00000626285 CUX2O14529 1486 aa13.79□□□□□ -0.2
PDAP1-205ENST00000626285 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
PDAP1-205ENST00000626285 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
PDAP1-205ENST00000626285 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
PDAP1-205ENST00000626285 NESP48681 1621 aa13.66□□□□□ -0.22
PDAP1-205ENST00000626285 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
PDAP1-205ENST00000626285 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
PDAP1-205ENST00000626285 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
PDAP1-205ENST00000626285 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
PDAP1-205ENST00000626285 WIZO95785 1651 aa13.52□□□□□ -0.25
PDAP1-205ENST00000626285 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
PDAP1-205ENST00000626285 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
PDAP1-205ENST00000626285 WDR62O43379 1518 aa13.44□□□□□ -0.26
PDAP1-205ENST00000626285 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
PDAP1-205ENST00000626285 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
PDAP1-205ENST00000626285 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
PDAP1-205ENST00000626285 CFTRP13569 1480 aa13.36□□□□□ -0.27
PDAP1-205ENST00000626285 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
PDAP1-205ENST00000626285 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
PDAP1-205ENST00000626285 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
PDAP1-205ENST00000626285 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
PDAP1-205ENST00000626285 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
PDAP1-205ENST00000626285 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
PDAP1-205ENST00000626285 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
PDAP1-205ENST00000626285 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
PDAP1-205ENST00000626285 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
PDAP1-205ENST00000626285 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
PDAP1-205ENST00000626285 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
PDAP1-205ENST00000626285 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
PDAP1-205ENST00000626285 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.32
PDAP1-205ENST00000626285 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
PDAP1-205ENST00000626285 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
PDAP1-205ENST00000626285 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
PDAP1-205ENST00000626285 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.33
PDAP1-205ENST00000626285 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.33
PDAP1-205ENST00000626285 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.33
PDAP1-205ENST00000626285 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
PDAP1-205ENST00000626285 CHD1O14646 1710 aa12.93□□□□□ -0.34
PDAP1-205ENST00000626285 ARHGEF11O15085 1522 aa12.92□□□□□ -0.34
PDAP1-205ENST00000626285 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■■■■■ 29.5
PDAP1-205ENST00000626285 CUX1P39880 1505 aa12.88□□□□□ -0.35
PDAP1-205ENST00000626285 FGD5Q6ZNL6 1462 aa12.86□□□□□ -0.35
PDAP1-205ENST00000626285 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
PDAP1-205ENST00000626285 SOGA1O94964 1423 aa12.84□□□□□ -0.35
PDAP1-205ENST00000626285 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
PDAP1-205ENST00000626285 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
PDAP1-205ENST00000626285 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
PDAP1-205ENST00000626285 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
PDAP1-205ENST00000626285 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
PDAP1-205ENST00000626285 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
PDAP1-205ENST00000626285 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
PDAP1-205ENST00000626285 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
PDAP1-205ENST00000626285 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
PDAP1-205ENST00000626285 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
PDAP1-205ENST00000626285 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
PDAP1-205ENST00000626285 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
PDAP1-205ENST00000626285 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
PDAP1-205ENST00000626285 FBLN2P98095 1184 aa12.7□□□□□ -0.38
PDAP1-205ENST00000626285 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
PDAP1-205ENST00000626285 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
PDAP1-205ENST00000626285 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
PDAP1-205ENST00000626285 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
PDAP1-205ENST00000626285 WRNQ14191 1432 aaPredicted RBP eCLIP12.65□□□□□ -0.38
PDAP1-205ENST00000626285 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
PDAP1-205ENST00000626285 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
PDAP1-205ENST00000626285 NUP160Q12769 1436 aa12.61□□□□□ -0.39
PDAP1-205ENST00000626285 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
PDAP1-205ENST00000626285 SHROOM2Q13796 1616 aa12.59□□□□□ -0.39
PDAP1-205ENST00000626285 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
PDAP1-205ENST00000626285 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
PDAP1-205ENST00000626285 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
PDAP1-205ENST00000626285 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-205ENST00000626285 CUL7Q14999 1698 aa12.45□□□□□ -0.42
PDAP1-205ENST00000626285 CHIC1Q5VXU3 224 aa12.42□□□□□ -0.42
PDAP1-205ENST00000626285 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms