RNA–Protein interactions for RNA: ENST00000461893.5

GNB1-205, Transcript of G protein subunit beta 1, humanhuman

TSL 2

Gene GNB1, Length 2,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-205ENST00000461893 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
GNB1-205ENST00000461893 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
GNB1-205ENST00000461893 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
GNB1-205ENST00000461893 ABCC9O60706 1549 aa27.91■■■□□ 2.06
GNB1-205ENST00000461893 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
GNB1-205ENST00000461893 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
GNB1-205ENST00000461893 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
GNB1-205ENST00000461893 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
GNB1-205ENST00000461893 NACADO15069 1562 aa27.18■■□□□ 1.94
GNB1-205ENST00000461893 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
GNB1-205ENST00000461893 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
GNB1-205ENST00000461893 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
GNB1-205ENST00000461893 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
GNB1-205ENST00000461893 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
GNB1-205ENST00000461893 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
GNB1-205ENST00000461893 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
GNB1-205ENST00000461893 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
GNB1-205ENST00000461893 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
GNB1-205ENST00000461893 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
GNB1-205ENST00000461893 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
GNB1-205ENST00000461893 WIZO95785 1651 aa25.58■■□□□ 1.69
GNB1-205ENST00000461893 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
GNB1-205ENST00000461893 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
GNB1-205ENST00000461893 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
GNB1-205ENST00000461893 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
GNB1-205ENST00000461893 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
GNB1-205ENST00000461893 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
GNB1-205ENST00000461893 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
GNB1-205ENST00000461893 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
GNB1-205ENST00000461893 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
GNB1-205ENST00000461893 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
GNB1-205ENST00000461893 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
GNB1-205ENST00000461893 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
GNB1-205ENST00000461893 CFTRP13569 1480 aa24.51■■□□□ 1.51
GNB1-205ENST00000461893 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
GNB1-205ENST00000461893 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
GNB1-205ENST00000461893 NESP48681 1621 aa24.45■■□□□ 1.5
GNB1-205ENST00000461893 TRIM41Q8WV44 630 aa24.39■■□□□ 1.5
GNB1-205ENST00000461893 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
GNB1-205ENST00000461893 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
GNB1-205ENST00000461893 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
GNB1-205ENST00000461893 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
GNB1-205ENST00000461893 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
GNB1-205ENST00000461893 CUX1P39880 1505 aa24.13■■□□□ 1.45
GNB1-205ENST00000461893 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
GNB1-205ENST00000461893 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
GNB1-205ENST00000461893 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
GNB1-205ENST00000461893 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
GNB1-205ENST00000461893 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
GNB1-205ENST00000461893 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
GNB1-205ENST00000461893 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
GNB1-205ENST00000461893 SOGA1O94964 1423 aa23.96■■□□□ 1.43
GNB1-205ENST00000461893 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
GNB1-205ENST00000461893 DNMBPQ6XZF7 1577 aa23.93■■□□□ 1.42
GNB1-205ENST00000461893 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
GNB1-205ENST00000461893 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
GNB1-205ENST00000461893 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
GNB1-205ENST00000461893 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
GNB1-205ENST00000461893 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
GNB1-205ENST00000461893 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
GNB1-205ENST00000461893 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
GNB1-205ENST00000461893 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
GNB1-205ENST00000461893 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
GNB1-205ENST00000461893 WDR62O43379 1518 aa23.72■■□□□ 1.39
GNB1-205ENST00000461893 CUX2O14529 1486 aa23.7■■□□□ 1.38
GNB1-205ENST00000461893 EEA1Q15075 1411 aa23.7■■□□□ 1.38
GNB1-205ENST00000461893 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
GNB1-205ENST00000461893 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
GNB1-205ENST00000461893 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
GNB1-205ENST00000461893 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
GNB1-205ENST00000461893 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
GNB1-205ENST00000461893 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
GNB1-205ENST00000461893 IGF1RP08069 1367 aa23.51■■□□□ 1.35
GNB1-205ENST00000461893 IFT140Q96RY7 1462 aa23.5■■□□□ 1.35
GNB1-205ENST00000461893 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
GNB1-205ENST00000461893 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
GNB1-205ENST00000461893 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.351e-10■■■■■ 35.6
GNB1-205ENST00000461893 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
GNB1-205ENST00000461893 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
GNB1-205ENST00000461893 KIF21BO75037 1637 aa23.45■■□□□ 1.34
GNB1-205ENST00000461893 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
GNB1-205ENST00000461893 GOLGA3Q08378 1498 aa23.43■■□□□ 1.34
GNB1-205ENST00000461893 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
GNB1-205ENST00000461893 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
GNB1-205ENST00000461893 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
GNB1-205ENST00000461893 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
GNB1-205ENST00000461893 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
GNB1-205ENST00000461893 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
GNB1-205ENST00000461893 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
GNB1-205ENST00000461893 CUL7Q14999 1698 aa23.28■■□□□ 1.32
GNB1-205ENST00000461893 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
GNB1-205ENST00000461893 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
GNB1-205ENST00000461893 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
GNB1-205ENST00000461893 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
GNB1-205ENST00000461893 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
GNB1-205ENST00000461893 MAGI1Q96QZ7 1491 aaPredicted RBP23.1■■□□□ 1.29
GNB1-205ENST00000461893 CLIP1P30622 1438 aa23.08■■□□□ 1.29
GNB1-205ENST00000461893 FBLN2P98095 1184 aa23.08■■□□□ 1.28
GNB1-205ENST00000461893 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
GNB1-205ENST00000461893 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms