Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LSM3P62310 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LSM3P62310 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LSM3P62310 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.16■□□□□ 0.5
LSM3P62310 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LSM3P62310 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM3P62310 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.16■□□□□ 0.5
LSM3P62310 OR2I1P-207ENST00000453522 948 ntBASIC18.16■□□□□ 0.5
LSM3P62310 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 AC010525.1-201ENST00000585559 441 ntBASIC18.16■□□□□ 0.5
LSM3P62310 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM3P62310 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.16■□□□□ 0.5
LSM3P62310 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM3P62310 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LSM3P62310 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LSM3P62310 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM3P62310 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSM3P62310 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM3P62310 AC018470.1-201ENST00000624790 3129 ntBASIC18.15■□□□□ 0.5
LSM3P62310 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM3P62310 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM3P62310 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM3P62310 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 MTDHP2-201ENST00000601468 714 ntBASIC18.15■□□□□ 0.5
LSM3P62310 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LSM3P62310 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM3P62310 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LSM3P62310 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM3P62310 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LSM3P62310 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
LSM3P62310 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM3P62310 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM3P62310 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSM3P62310 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LSM3P62310 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.14■□□□□ 0.49
LSM3P62310 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 AL117332.1-201ENST00000622628 974 ntBASIC18.14■□□□□ 0.49
LSM3P62310 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM3P62310 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
LSM3P62310 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM3P62310 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 BX664725.1-201ENST00000438252 379 ntBASIC18.13■□□□□ 0.49
LSM3P62310 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.13■□□□□ 0.49
LSM3P62310 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM3P62310 AC092028.1-203ENST00000608262 953 ntBASIC18.13■□□□□ 0.49
LSM3P62310 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM3P62310 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms