Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.8■□□□□ 0.6
HCN1O60741 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HCN1O60741 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.8■□□□□ 0.6
HCN1O60741 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.8■□□□□ 0.6
HCN1O60741 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 AC092118.2-201ENST00000613495 667 ntBASIC18.8■□□□□ 0.6
HCN1O60741 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HCN1O60741 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.8■□□□□ 0.6
HCN1O60741 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
HCN1O60741 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCN1O60741 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCN1O60741 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
HCN1O60741 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.79■□□□□ 0.6
HCN1O60741 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 AC091799.1-201ENST00000422823 811 ntBASIC18.79■□□□□ 0.6
HCN1O60741 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.79■□□□□ 0.6
HCN1O60741 FAM21FP-204ENST00000608637 956 ntBASIC18.79■□□□□ 0.6
HCN1O60741 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCN1O60741 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HCN1O60741 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.79■□□□□ 0.6
HCN1O60741 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HCN1O60741 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCN1O60741 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
HCN1O60741 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HCN1O60741 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HCN1O60741 AC010980.2-201ENST00000587099 1412 ntBASIC18.78■□□□□ 0.6
HCN1O60741 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.78■□□□□ 0.6
HCN1O60741 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.78■□□□□ 0.6
HCN1O60741 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.78■□□□□ 0.6
HCN1O60741 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HCN1O60741 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 AC073314.1-201ENST00000568729 2216 ntBASIC18.78■□□□□ 0.6
HCN1O60741 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HCN1O60741 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HCN1O60741 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCN1O60741 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.77■□□□□ 0.6
HCN1O60741 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 AC007225.1-201ENST00000566331 1836 ntBASIC18.77■□□□□ 0.6
HCN1O60741 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HCN1O60741 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 BX276092.2-201ENST00000417668 665 ntBASIC18.77■□□□□ 0.6
HCN1O60741 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.77■□□□□ 0.6
HCN1O60741 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
HCN1O60741 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.77■□□□□ 0.6
HCN1O60741 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCN1O60741 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HCN1O60741 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HCN1O60741 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.77■□□□□ 0.6
HCN1O60741 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HCN1O60741 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCN1O60741 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCN1O60741 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.76■□□□□ 0.59
HCN1O60741 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.76■□□□□ 0.59
HCN1O60741 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 AC100791.3-201ENST00000617619 330 ntBASIC18.76■□□□□ 0.59
HCN1O60741 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 AL391422.3-201ENST00000603791 2761 ntBASIC18.76■□□□□ 0.59
HCN1O60741 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.76■□□□□ 0.59
HCN1O60741 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.76■□□□□ 0.59
HCN1O60741 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCN1O60741 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms