RNA–Protein interactions for RNA: ENST00000405097.5

RDX-202, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-202ENST00000405097 NISCHQ9Y2I1 1504 aa42.64■■■■■ 4.42
RDX-202ENST00000405097 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
RDX-202ENST00000405097 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
RDX-202ENST00000405097 ZCCHC6Q5VYS8 1495 aaKnown RBP36.03■■■■□ 3.36
RDX-202ENST00000405097 SUPT5HO00267 1087 aaKnown RBP35.52■■■■□ 3.28
RDX-202ENST00000405097 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
RDX-202ENST00000405097 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
RDX-202ENST00000405097 CHIC1Q5VXU3 224 aa34.44■■■■□ 3.1
RDX-202ENST00000405097 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
RDX-202ENST00000405097 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
RDX-202ENST00000405097 ABCC9O60706 1549 aa33.96■■■■□ 3.03
RDX-202ENST00000405097 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.98
RDX-202ENST00000405097 NACADO15069 1562 aa33.6■■■□□ 2.97
RDX-202ENST00000405097 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
RDX-202ENST00000405097 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.92
RDX-202ENST00000405097 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
RDX-202ENST00000405097 PCGF6Q9BYE7 350 aa33.22■■■□□ 2.91
RDX-202ENST00000405097 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
RDX-202ENST00000405097 HRCP23327 699 aa33.09■■■□□ 2.89
RDX-202ENST00000405097 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
RDX-202ENST00000405097 WIZO95785 1651 aa32.97■■■□□ 2.87
RDX-202ENST00000405097 FAM9AQ8IZU1 332 aaPredicted RBP32.84■■■□□ 2.85
RDX-202ENST00000405097 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
RDX-202ENST00000405097 TRIM26Q12899 539 aaPredicted RBP32.6■■■□□ 2.81
RDX-202ENST00000405097 UNC13AQ9UPW8 1703 aa32.59■■■□□ 2.81
RDX-202ENST00000405097 EHMT2Q96KQ7 1210 aa32.58■■■□□ 2.81
RDX-202ENST00000405097 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
RDX-202ENST00000405097 PPARGC1BQ86YN6 1023 aaKnown RBP32.47■■■□□ 2.79
RDX-202ENST00000405097 EIF4G1Q04637 1599 aaKnown RBP32.43■■■□□ 2.78
RDX-202ENST00000405097 TOP2AP11388 1531 aaKnown RBP32.43■■■□□ 2.78
RDX-202ENST00000405097 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
RDX-202ENST00000405097 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
RDX-202ENST00000405097 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
RDX-202ENST00000405097 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
RDX-202ENST00000405097 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
RDX-202ENST00000405097 SOGA1O94964 1423 aa31.86■■■□□ 2.69
RDX-202ENST00000405097 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
RDX-202ENST00000405097 ZEB1P37275 1124 aaPredicted RBP31.78■■■□□ 2.68
RDX-202ENST00000405097 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
RDX-202ENST00000405097 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
RDX-202ENST00000405097 CSRNP3Q8WYN3 585 aa31.66■■■□□ 2.66
RDX-202ENST00000405097 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
RDX-202ENST00000405097 CEP162Q5TB80 1403 aa31.63■■■□□ 2.65
RDX-202ENST00000405097 BAZ1BQ9UIG0 1483 aaKnown RBP31.63■■■□□ 2.65
RDX-202ENST00000405097 EEA1Q15075 1411 aa31.63■■■□□ 2.65
RDX-202ENST00000405097 TNIKQ9UKE5 1360 aa31.58■■■□□ 2.65
RDX-202ENST00000405097 UBTFP17480 764 aaKnown RBP31.55■■■□□ 2.64
RDX-202ENST00000405097 SYNJ1O43426 1573 aa31.51■■■□□ 2.63
RDX-202ENST00000405097 TTBK1Q5TCY1 1321 aaPredicted RBP31.49■■■□□ 2.63
RDX-202ENST00000405097 GOLGA3Q08378 1498 aa31.43■■■□□ 2.62
RDX-202ENST00000405097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.37■■■□□ 2.61
RDX-202ENST00000405097 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.6
RDX-202ENST00000405097 CCER1Q8TC90 406 aaPredicted RBP31.26■■■□□ 2.6
RDX-202ENST00000405097 KIF21BO75037 1637 aa31.2■■■□□ 2.59
RDX-202ENST00000405097 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
RDX-202ENST00000405097 NCAPD3P42695 1498 aa31.11■■■□□ 2.57
RDX-202ENST00000405097 RAPGEF2Q9Y4G8 1499 aa31.09■■■□□ 2.57
RDX-202ENST00000405097 CLIP1P30622 1438 aa31.08■■■□□ 2.57
RDX-202ENST00000405097 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
RDX-202ENST00000405097 RANGAP1P46060 587 aaPredicted RBP31■■■□□ 2.55
RDX-202ENST00000405097 BIVM-ERCC5R4GMW8 1640 aa30.99■■■□□ 2.55
RDX-202ENST00000405097 VPS8Q8N3P4 1428 aa30.91■■■□□ 2.54
RDX-202ENST00000405097 CUX1P39880 1505 aa30.87■■■□□ 2.53
RDX-202ENST00000405097 CFTRP13569 1480 aa30.83■■■□□ 2.53
RDX-202ENST00000405097 PRXQ9BXM0 1461 aa30.78■■■□□ 2.52
RDX-202ENST00000405097 APLP2Q06481 763 aa30.78■■■□□ 2.52
RDX-202ENST00000405097 HNRNPUL2Q1KMD3 747 aaKnown RBP30.76■■■□□ 2.51
RDX-202ENST00000405097 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
RDX-202ENST00000405097 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
RDX-202ENST00000405097 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
RDX-202ENST00000405097 DIEXFQ68CQ4 756 aaKnown RBP30.54■■■□□ 2.48
RDX-202ENST00000405097 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
RDX-202ENST00000405097 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
RDX-202ENST00000405097 CUX2O14529 1486 aa30.45■■■□□ 2.47
RDX-202ENST00000405097 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
RDX-202ENST00000405097 CC2D2AQ9P2K1 1620 aa30.42■■■□□ 2.46
RDX-202ENST00000405097 IGF1RP08069 1367 aa30.38■■■□□ 2.45
RDX-202ENST00000405097 SCAF1Q9H7N4 1312 aaKnown RBP30.38■■■□□ 2.45
RDX-202ENST00000405097 ARHGAP35Q9NRY4 1499 aa30.36■■■□□ 2.45
RDX-202ENST00000405097 ZNF316A6NFI3 1004 aaPredicted RBP30.36■■■□□ 2.45
RDX-202ENST00000405097 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
RDX-202ENST00000405097 CARMIL1Q5VZK9 1371 aa30.25■■■□□ 2.43
RDX-202ENST00000405097 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
RDX-202ENST00000405097 RRBP1Q9P2E9 1410 aaKnown RBP30.16■■■□□ 2.42
RDX-202ENST00000405097 NEUROD1Q13562 356 aa30.15■■■□□ 2.42
RDX-202ENST00000405097 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
RDX-202ENST00000405097 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
RDX-202ENST00000405097 NESP48681 1621 aa30.1■■■□□ 2.41
RDX-202ENST00000405097 RAD54L2Q9Y4B4 1467 aa30.08■■■□□ 2.41
RDX-202ENST00000405097 CCNB3Q8WWL7 1395 aa30.07■■■□□ 2.4
RDX-202ENST00000405097 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
RDX-202ENST00000405097 ITGAEP38570 1179 aa30.03■■■□□ 2.4
RDX-202ENST00000405097 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
RDX-202ENST00000405097 POLA1P09884 1462 aaPredicted RBP30.01■■■□□ 2.39
RDX-202ENST00000405097 CENPBP07199 599 aaPredicted RBP30■■■□□ 2.39
RDX-202ENST00000405097 P3H3Q8IVL6 736 aa30■■■□□ 2.39
RDX-202ENST00000405097 CLSPNQ9HAW4 1339 aa30■■■□□ 2.39
RDX-202ENST00000405097 TIAM1Q13009 1591 aa29.99■■■□□ 2.39
RDX-202ENST00000405097 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
RDX-202ENST00000405097 MIER1Q8N108 512 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms