Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
RIPK2O43353 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
RIPK2O43353 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RIPK2O43353 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPK2O43353 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.47■□□□□ 0.87
RIPK2O43353 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPK2O43353 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.47■□□□□ 0.87
RIPK2O43353 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.47■□□□□ 0.87
RIPK2O43353 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK2O43353 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPK2O43353 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK2O43353 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RIPK2O43353 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.46■□□□□ 0.87
RIPK2O43353 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.46■□□□□ 0.87
RIPK2O43353 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.46■□□□□ 0.87
RIPK2O43353 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RIPK2O43353 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK2O43353 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RIPK2O43353 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RIPK2O43353 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 RASA4CP-201ENST00000424092 1398 ntBASIC20.46■□□□□ 0.87
RIPK2O43353 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK2O43353 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 AC010141.2-201ENST00000452426 721 ntBASIC20.45■□□□□ 0.86
RIPK2O43353 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.45■□□□□ 0.86
RIPK2O43353 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.45■□□□□ 0.86
RIPK2O43353 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.45■□□□□ 0.86
RIPK2O43353 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RIPK2O43353 Z82202.1-201ENST00000623446 1880 ntBASIC20.45■□□□□ 0.86
RIPK2O43353 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RIPK2O43353 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK2O43353 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.44■□□□□ 0.86
RIPK2O43353 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 AL354811.1-201ENST00000610286 706 ntBASIC20.44■□□□□ 0.86
RIPK2O43353 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RIPK2O43353 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RIPK2O43353 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RIPK2O43353 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.44■□□□□ 0.86
RIPK2O43353 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.44■□□□□ 0.86
RIPK2O43353 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK2O43353 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK2O43353 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK2O43353 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 EDA-201ENST00000338901 1233 ntBASIC20.43■□□□□ 0.86
RIPK2O43353 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms