RNA–Protein interactions for RNA: ENST00000358660.3

NTRK1-201, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NTRK1, Length 2,492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-201ENST00000358660 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.86
NTRK1-201ENST00000358660 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
NTRK1-201ENST00000358660 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
NTRK1-201ENST00000358660 SHROOM4Q9ULL8 1493 aa32.7■■■□□ 2.83
NTRK1-201ENST00000358660 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
NTRK1-201ENST00000358660 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
NTRK1-201ENST00000358660 HRCP23327 699 aa32■■■□□ 2.71
NTRK1-201ENST00000358660 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
NTRK1-201ENST00000358660 ABCC9O60706 1549 aa31.93■■■□□ 2.7
NTRK1-201ENST00000358660 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
NTRK1-201ENST00000358660 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
NTRK1-201ENST00000358660 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
NTRK1-201ENST00000358660 NACADO15069 1562 aa31.33■■■□□ 2.61
NTRK1-201ENST00000358660 PCGF6Q9BYE7 350 aa31.24■■■□□ 2.59
NTRK1-201ENST00000358660 PPARGC1BQ86YN6 1023 aaKnown RBP31.13■■■□□ 2.57
NTRK1-201ENST00000358660 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
NTRK1-201ENST00000358660 PELP1Q8IZL8 1130 aaKnown RBP30.94■■■□□ 2.54
NTRK1-201ENST00000358660 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
NTRK1-201ENST00000358660 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
NTRK1-201ENST00000358660 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
NTRK1-201ENST00000358660 TRIM26Q12899 539 aaPredicted RBP30.41■■■□□ 2.46
NTRK1-201ENST00000358660 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
NTRK1-201ENST00000358660 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
NTRK1-201ENST00000358660 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
NTRK1-201ENST00000358660 ZEB1P37275 1124 aaPredicted RBP30.25■■■□□ 2.43
NTRK1-201ENST00000358660 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
NTRK1-201ENST00000358660 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
NTRK1-201ENST00000358660 WIZO95785 1651 aa30.14■■■□□ 2.42
NTRK1-201ENST00000358660 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
NTRK1-201ENST00000358660 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
NTRK1-201ENST00000358660 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
NTRK1-201ENST00000358660 MYT1Q01538 1121 aa29.78■■■□□ 2.36
NTRK1-201ENST00000358660 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
NTRK1-201ENST00000358660 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
NTRK1-201ENST00000358660 ACIN1Q9UKV3 1341 aaKnown RBP29.52■■■□□ 2.32
NTRK1-201ENST00000358660 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
NTRK1-201ENST00000358660 FAM9AQ8IZU1 332 aaPredicted RBP29.47■■■□□ 2.31
NTRK1-201ENST00000358660 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
NTRK1-201ENST00000358660 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
NTRK1-201ENST00000358660 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
NTRK1-201ENST00000358660 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
NTRK1-201ENST00000358660 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
NTRK1-201ENST00000358660 GTF3C3Q9Y5Q9 886 aa29.2■■■□□ 2.26
NTRK1-201ENST00000358660 CENPBP07199 599 aaPredicted RBP29.18■■■□□ 2.26
NTRK1-201ENST00000358660 ABCC8Q09428 1581 aa29.17■■■□□ 2.26
NTRK1-201ENST00000358660 EHMT2Q96KQ7 1210 aa29.07■■■□□ 2.24
NTRK1-201ENST00000358660 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
NTRK1-201ENST00000358660 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
NTRK1-201ENST00000358660 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
NTRK1-201ENST00000358660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.96■■■□□ 2.23
NTRK1-201ENST00000358660 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
NTRK1-201ENST00000358660 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
NTRK1-201ENST00000358660 EEA1Q15075 1411 aa28.77■■■□□ 2.2
NTRK1-201ENST00000358660 SOGA1O94964 1423 aa28.75■■■□□ 2.19
NTRK1-201ENST00000358660 CEP162Q5TB80 1403 aa28.74■■■□□ 2.19
NTRK1-201ENST00000358660 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
NTRK1-201ENST00000358660 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
NTRK1-201ENST00000358660 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
NTRK1-201ENST00000358660 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
NTRK1-201ENST00000358660 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
NTRK1-201ENST00000358660 CFTRP13569 1480 aa28.54■■■□□ 2.16
NTRK1-201ENST00000358660 ZNF316A6NFI3 1004 aaPredicted RBP28.52■■■□□ 2.16
NTRK1-201ENST00000358660 GOLGA3Q08378 1498 aa28.52■■■□□ 2.16
NTRK1-201ENST00000358660 KIF21BO75037 1637 aa28.4■■■□□ 2.14
NTRK1-201ENST00000358660 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
NTRK1-201ENST00000358660 TOP2BQ02880 1626 aa28.39■■■□□ 2.14
NTRK1-201ENST00000358660 YTHDC1Q96MU7 727 aaKnown RBP28.36■■■□□ 2.13
NTRK1-201ENST00000358660 DNAJC5BQ9UF47 199 aa28.36■■■□□ 2.13
NTRK1-201ENST00000358660 CUX1P39880 1505 aa28.34■■■□□ 2.13
NTRK1-201ENST00000358660 UBTFP17480 764 aaKnown RBP28.34■■■□□ 2.13
NTRK1-201ENST00000358660 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
NTRK1-201ENST00000358660 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
NTRK1-201ENST00000358660 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
NTRK1-201ENST00000358660 MIER1Q8N108 512 aa28.25■■■□□ 2.11
NTRK1-201ENST00000358660 NESP48681 1621 aa28.2■■■□□ 2.11
NTRK1-201ENST00000358660 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
NTRK1-201ENST00000358660 CLIP1P30622 1438 aa28.13■■■□□ 2.09
NTRK1-201ENST00000358660 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
NTRK1-201ENST00000358660 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
NTRK1-201ENST00000358660 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
NTRK1-201ENST00000358660 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
NTRK1-201ENST00000358660 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
NTRK1-201ENST00000358660 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
NTRK1-201ENST00000358660 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
NTRK1-201ENST00000358660 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
NTRK1-201ENST00000358660 CUX2O14529 1486 aa27.9■■■□□ 2.06
NTRK1-201ENST00000358660 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.05
NTRK1-201ENST00000358660 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
NTRK1-201ENST00000358660 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
NTRK1-201ENST00000358660 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
NTRK1-201ENST00000358660 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
NTRK1-201ENST00000358660 APLP2Q06481 763 aa27.81■■■□□ 2.04
NTRK1-201ENST00000358660 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 ANP32EQ9BTT0 268 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 IGF1RP08069 1367 aa27.79■■■□□ 2.04
NTRK1-201ENST00000358660 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
NTRK1-201ENST00000358660 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
NTRK1-201ENST00000358660 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
NTRK1-201ENST00000358660 TSHZ2Q9NRE2 1034 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms