RNA–Protein interactions for RNA: ENST00000536168.2

SPOCK2-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK2, Length 1,824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-209ENST00000536168 NISCHQ9Y2I1 1504 aa48.6■■■■■ 5.37
SPOCK2-209ENST00000536168 CCDC180Q9P1Z9 1646 aa42.76■■■■■ 4.44
SPOCK2-209ENST00000536168 ABCC9O60706 1549 aa41.36■■■■■ 4.21
SPOCK2-209ENST00000536168 ZCCHC6Q5VYS8 1495 aaKnown RBP40.65■■■■■ 4.1
SPOCK2-209ENST00000536168 DCAF8L2P0C7V8 631 aa40.48■■■■■ 4.07
SPOCK2-209ENST00000536168 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
SPOCK2-209ENST00000536168 NACADO15069 1562 aa40.03■■■■■ 4
SPOCK2-209ENST00000536168 MYO15BQ96JP2 1530 aa39.95■■■■□ 3.99
SPOCK2-209ENST00000536168 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
SPOCK2-209ENST00000536168 SCRIBQ14160 1630 aa39.31■■■■□ 3.88
SPOCK2-209ENST00000536168 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
SPOCK2-209ENST00000536168 SHROOM4Q9ULL8 1493 aa39.13■■■■□ 3.85
SPOCK2-209ENST00000536168 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.81
SPOCK2-209ENST00000536168 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
SPOCK2-209ENST00000536168 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
SPOCK2-209ENST00000536168 EIF4G1Q04637 1599 aaKnown RBP37.69■■■■□ 3.62
SPOCK2-209ENST00000536168 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
SPOCK2-209ENST00000536168 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.6
SPOCK2-209ENST00000536168 MROH2BQ7Z745 1585 aa37.56■■■■□ 3.6
SPOCK2-209ENST00000536168 CC2D2AQ9P2K1 1620 aa37.38■■■■□ 3.57
SPOCK2-209ENST00000536168 RSF1Q96T23 1441 aaPredicted RBP37.37■■■■□ 3.57
SPOCK2-209ENST00000536168 DNAJC5BQ9UF47 199 aa37.33■■■■□ 3.57
SPOCK2-209ENST00000536168 WIZO95785 1651 aa37.21■■■■□ 3.55
SPOCK2-209ENST00000536168 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
SPOCK2-209ENST00000536168 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
SPOCK2-209ENST00000536168 PEG3Q9GZU2 1588 aa37.09■■■■□ 3.53
SPOCK2-209ENST00000536168 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
SPOCK2-209ENST00000536168 NCAPD3P42695 1498 aa36.95■■■■□ 3.51
SPOCK2-209ENST00000536168 BAZ1BQ9UIG0 1483 aaKnown RBP36.9■■■■□ 3.5
SPOCK2-209ENST00000536168 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
SPOCK2-209ENST00000536168 TOP2AP11388 1531 aaKnown RBP36.75■■■■□ 3.47
SPOCK2-209ENST00000536168 CCDC88BA6NC98 1476 aa36.38■■■■□ 3.41
SPOCK2-209ENST00000536168 NESP48681 1621 aa36.05■■■■□ 3.36
SPOCK2-209ENST00000536168 CADPSQ9ULU8 1353 aa35.96■■■■□ 3.35
SPOCK2-209ENST00000536168 CFTRP13569 1480 aa35.91■■■■□ 3.34
SPOCK2-209ENST00000536168 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
SPOCK2-209ENST00000536168 PRDM2Q13029 1718 aa35.67■■■■□ 3.3
SPOCK2-209ENST00000536168 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
SPOCK2-209ENST00000536168 PDS5BQ9NTI5 1447 aa35.59■■■■□ 3.29
SPOCK2-209ENST00000536168 KIF21AQ7Z4S6 1674 aa35.58■■■■□ 3.29
SPOCK2-209ENST00000536168 ERCC6Q03468 1493 aa35.51■■■■□ 3.28
SPOCK2-209ENST00000536168 CEP164Q9UPV0 1460 aa35.46■■■■□ 3.27
SPOCK2-209ENST00000536168 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
SPOCK2-209ENST00000536168 URB2Q14146 1524 aaKnown RBP35.24■■■■□ 3.23
SPOCK2-209ENST00000536168 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
SPOCK2-209ENST00000536168 THOC2Q8NI27 1593 aaKnown RBP35.22■■■■□ 3.23
SPOCK2-209ENST00000536168 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
SPOCK2-209ENST00000536168 CUX1P39880 1505 aa35.18■■■■□ 3.22
SPOCK2-209ENST00000536168 SYNJ1O43426 1573 aa35.14■■■■□ 3.22
SPOCK2-209ENST00000536168 TOPBP1Q92547 1522 aa35.12■■■■□ 3.21
SPOCK2-209ENST00000536168 DNMBPQ6XZF7 1577 aa35.09■■■■□ 3.21
SPOCK2-209ENST00000536168 WDR62O43379 1518 aa35.09■■■■□ 3.21
SPOCK2-209ENST00000536168 CHIC1Q5VXU3 224 aa35.02■■■■□ 3.2
SPOCK2-209ENST00000536168 TOP2BQ02880 1626 aa35■■■■□ 3.19
SPOCK2-209ENST00000536168 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
SPOCK2-209ENST00000536168 FGD5Q6ZNL6 1462 aa34.92■■■■□ 3.18
SPOCK2-209ENST00000536168 TRIM41Q8WV44 630 aa34.91■■■■□ 3.18
SPOCK2-209ENST00000536168 POLA1P09884 1462 aaPredicted RBP34.89■■■■□ 3.18
SPOCK2-209ENST00000536168 CUX2O14529 1486 aa34.81■■■■□ 3.16
SPOCK2-209ENST00000536168 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
SPOCK2-209ENST00000536168 SOGA1O94964 1423 aa34.72■■■■□ 3.15
SPOCK2-209ENST00000536168 TARBP1Q13395 1621 aaKnown RBP34.67■■■■□ 3.14
SPOCK2-209ENST00000536168 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
SPOCK2-209ENST00000536168 ZNF608Q9ULD9 1512 aaPredicted RBP34.58■■■■□ 3.13
SPOCK2-209ENST00000536168 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
SPOCK2-209ENST00000536168 ABCA10Q8WWZ4 1543 aa34.54■■■■□ 3.12
SPOCK2-209ENST00000536168 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
SPOCK2-209ENST00000536168 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
SPOCK2-209ENST00000536168 RUSC2Q8N2Y8 1516 aa34.46■■■■□ 3.11
SPOCK2-209ENST00000536168 EIF4G3O43432 1585 aaKnown RBP34.41■■■■□ 3.1
SPOCK2-209ENST00000536168 ABCA5Q8WWZ7 1642 aa34.38■■■■□ 3.09
SPOCK2-209ENST00000536168 FAM9AQ8IZU1 332 aaPredicted RBP34.35■■■■□ 3.09
SPOCK2-209ENST00000536168 KIF27Q86VH2 1401 aa34.34■■■■□ 3.09
SPOCK2-209ENST00000536168 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
SPOCK2-209ENST00000536168 PBRM1Q86U86 1689 aa34.24■■■■□ 3.07
SPOCK2-209ENST00000536168 GRIN2BQ13224 1484 aa34.19■■■■□ 3.06
SPOCK2-209ENST00000536168 IGF1RP08069 1367 aa34.16■■■■□ 3.06
SPOCK2-209ENST00000536168 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
SPOCK2-209ENST00000536168 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
SPOCK2-209ENST00000536168 EEA1Q15075 1411 aa34.1■■■■□ 3.05
SPOCK2-209ENST00000536168 CSRNP3Q8WYN3 585 aa34.07■■■■□ 3.04
SPOCK2-209ENST00000536168 ADAMTS12P58397 1594 aa34.01■■■■□ 3.03
SPOCK2-209ENST00000536168 MAGI1Q96QZ7 1491 aaPredicted RBP33.99■■■■□ 3.03
SPOCK2-209ENST00000536168 EHMT2Q96KQ7 1210 aa33.97■■■■□ 3.03
SPOCK2-209ENST00000536168 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
SPOCK2-209ENST00000536168 CUL7Q14999 1698 aa33.95■■■■□ 3.03
SPOCK2-209ENST00000536168 FBLN2P98095 1184 aa33.93■■■■□ 3.02
SPOCK2-209ENST00000536168 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
SPOCK2-209ENST00000536168 PRXQ9BXM0 1461 aa33.91■■■■□ 3.02
SPOCK2-209ENST00000536168 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
SPOCK2-209ENST00000536168 CHMP7Q8WUX9 453 aaPredicted RBP33.86■■■■□ 3.01
SPOCK2-209ENST00000536168 CHD1O14646 1710 aa33.85■■■■□ 3.01
SPOCK2-209ENST00000536168 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
SPOCK2-209ENST00000536168 GRIN2AQ12879 1464 aa33.79■■■■□ 3
SPOCK2-209ENST00000536168 KIF21BO75037 1637 aa33.78■■■■□ 3
SPOCK2-209ENST00000536168 LOC105371045A0A1W2PR82 267 aa33.72■■■□□ 2.99
SPOCK2-209ENST00000536168 GOLGA3Q08378 1498 aa33.67■■■□□ 2.98
SPOCK2-209ENST00000536168 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
SPOCK2-209ENST00000536168 UBTFP17480 764 aaKnown RBP33.58■■■□□ 2.97
SPOCK2-209ENST00000536168 NUP160Q12769 1436 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms