Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 RPH3AL-214ENST00000574722 586 ntTSL 417.84■□□□□ 0.452e-6■□□□□ 11
NKRFO15226 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.99■□□□□ 0.312e-6■□□□□ 11
NKRFO15226 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.32e-6■□□□□ 11
NKRFO15226 ANKRD11-215ENST00000568512 294 ntTSL 29.95□□□□□ -0.822e-6■□□□□ 11
NKRFO15226 MAPK9-204ENST00000393362 1344 ntTSL 538.7■■■■□ 3.797e-12■□□□□ 11
NKRFO15226 MAPK9-211ENST00000523583 657 ntTSL 531.17■■■□□ 2.587e-12■□□□□ 11
NKRFO15226 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.69■■■□□ 2.027e-12■□□□□ 11
NKRFO15226 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.98■■□□□ 1.437e-12■□□□□ 11
NKRFO15226 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.3■■□□□ 17e-12■□□□□ 11
NKRFO15226 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.797e-12■□□□□ 11
NKRFO15226 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.93■□□□□ 0.787e-12■□□□□ 11
NKRFO15226 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.627e-12■□□□□ 11
NKRFO15226 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.51■■□□□ 1.834e-6■□□□□ 11
NKRFO15226 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.724e-6■□□□□ 11
NKRFO15226 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.6■□□□□ 0.574e-6■□□□□ 11
NKRFO15226 ERGIC1-209ENST00000520642 539 ntTSL 417.97■□□□□ 0.474e-6■□□□□ 11
NKRFO15226 ERGIC1-207ENST00000520326 647 ntTSL 516.55■□□□□ 0.244e-6■□□□□ 11
NKRFO15226 BRD4-208ENST00000597315 892 ntTSL 531.1■■■□□ 2.576e-8■□□□□ 11
NKRFO15226 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.35■■■□□ 2.296e-8■□□□□ 11
NKRFO15226 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.186e-8■□□□□ 11
NKRFO15226 GDPD5-206ENST00000527820 3211 ntTSL 1 (best)14.43□□□□□ -0.16e-7■□□□□ 11
NKRFO15226 IGF2BP2-208ENST00000466476 469 ntTSL 214.28□□□□□ -0.121e-10■□□□□ 11
NKRFO15226 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.372e-6■□□□□ 11
NKRFO15226 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.454e-7■□□□□ 11
NKRFO15226 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.87■■□□□ 1.251e-6■□□□□ 11
NKRFO15226 AC110285.2-202ENST00000608155 414 ntTSL 518.89■□□□□ 0.611e-6■□□□□ 11
NKRFO15226 LIN54-210ENST00000510877 4507 ntTSL 1 (best)14.01□□□□□ -0.171e-13■□□□□ 11
NKRFO15226 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-13■□□□□ 11
NKRFO15226 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC11.49□□□□□ -0.571e-13■□□□□ 11
NKRFO15226 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.62■■■□□ 2.011e-7■□□□□ 11
NKRFO15226 FKBP1B-204ENST00000438630 1137 ntTSL 1 (best)18.98■□□□□ 0.631e-7■□□□□ 11
NKRFO15226 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.351e-7■□□□□ 11
NKRFO15226 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.51■□□□□ 0.071e-7■□□□□ 11
NKRFO15226 FKBP1B-206ENST00000496149 1601 ntTSL 515.28■□□□□ 0.041e-7■□□□□ 11
NKRFO15226 MFSD2B-203ENST00000453731 674 ntTSL 312□□□□□ -0.491e-7■□□□□ 11
NKRFO15226 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.044e-7■□□□□ 11
NKRFO15226 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.024e-7■□□□□ 11
NKRFO15226 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.623e-7■□□□□ 11
NKRFO15226 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.099e-8■□□□□ 11
NKRFO15226 URGCP-203ENST00000426198 885 ntTSL 224.74■■□□□ 1.552e-6■□□□□ 11
NKRFO15226 URGCP-211ENST00000477768 500 ntTSL 424.74■■□□□ 1.552e-6■□□□□ 11
NKRFO15226 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.66■□□□□ 0.742e-6■□□□□ 11
NKRFO15226 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.082e-6■□□□□ 11
NKRFO15226 URGCP-208ENST00000455877 591 ntTSL 414.89□□□□□ -0.032e-6■□□□□ 11
NKRFO15226 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.052e-6■□□□□ 11
NKRFO15226 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.352e-6■□□□□ 11
NKRFO15226 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■□□□□ 11
NKRFO15226 URGCP-204ENST00000439702 592 ntTSL 47.37□□□□□ -1.232e-6■□□□□ 11
NKRFO15226 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.792e-6■□□□□ 11
NKRFO15226 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.22e-6■□□□□ 11
NKRFO15226 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.132e-6■□□□□ 11
NKRFO15226 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.52e-6■□□□□ 11
NKRFO15226 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.291e-6■□□□□ 11
NKRFO15226 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 01e-6■□□□□ 11
NKRFO15226 UNKL-214ENST00000515195 481 ntTSL 417.6■□□□□ 0.412e-6■□□□□ 11
NKRFO15226 UNKL-213ENST00000513783 582 ntTSL 416.39■□□□□ 0.212e-6■□□□□ 11
NKRFO15226 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.723e-7■□□□□ 11
NKRFO15226 DENND4A-208ENST00000568515 2655 ntTSL 223.98■■□□□ 1.434e-16■□□□□ 11
NKRFO15226 DENND4A-206ENST00000564674 3389 ntTSL 1 (best)20.67■□□□□ 0.94e-16■□□□□ 11
NKRFO15226 MMD-202ENST00000571578 670 ntTSL 320.15■□□□□ 0.823e-7■□□□□ 11
NKRFO15226 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.444e-16■□□□□ 11
NKRFO15226 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.91□□□□□ -1.944e-16■□□□□ 11
NKRFO15226 CADM1-207ENST00000537140 1646 ntTSL 1 (best)24.68■■□□□ 1.542e-7■□□□□ 11
NKRFO15226 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.26■■□□□ 1.472e-7■□□□□ 11
NKRFO15226 CADM1-210ENST00000540951 572 ntTSL 321.84■■□□□ 1.092e-7■□□□□ 11
NKRFO15226 CADM1-205ENST00000536781 575 ntTSL 421.84■■□□□ 1.092e-7■□□□□ 11
NKRFO15226 CADM1-218ENST00000545380 2373 ntTSL 1 (best)19.1■□□□□ 0.652e-7■□□□□ 11
NKRFO15226 CADM1-211ENST00000541434 1112 ntTSL 1 (best)17.73■□□□□ 0.432e-7■□□□□ 11
NKRFO15226 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.91□□□□□ -0.022e-7■□□□□ 11
NKRFO15226 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13.9□□□□□ -0.182e-7■□□□□ 11
NKRFO15226 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-7■□□□□ 11
NKRFO15226 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.842e-7■□□□□ 11
NKRFO15226 CADM1-214ENST00000543249 565 ntTSL 46.67□□□□□ -1.342e-7■□□□□ 11
NKRFO15226 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.871e-7■□□□□ 11
NKRFO15226 LARP1-211ENST00000521577 817 ntTSL 528.13■■■□□ 2.092e-6■□□□□ 11
NKRFO15226 LARP1-208ENST00000518892 399 ntTSL 324.48■■□□□ 1.512e-6■□□□□ 11
NKRFO15226 LARP1-204ENST00000518297 2630 ntTSL 522.83■■□□□ 1.252e-6■□□□□ 11
NKRFO15226 LARP1-210ENST00000519931 569 ntTSL 48.31□□□□□ -1.082e-6■□□□□ 11
NKRFO15226 LARP1-202ENST00000517616 501 ntTSL 54.61□□□□□ -1.672e-6■□□□□ 11
NKRFO15226 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.314e-6■□□□□ 10.9
NKRFO15226 HS3ST3B1-202ENST00000466596 2808 ntTSL 216.84■□□□□ 0.294e-6■□□□□ 10.9
NKRFO15226 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.452e-22■□□□□ 10.9
NKRFO15226 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.422e-22■□□□□ 10.9
NKRFO15226 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.35■■■□□ 2.452e-6■□□□□ 10.9
NKRFO15226 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.042e-6■□□□□ 10.9
NKRFO15226 SSBP4-205ENST00000598159 747 ntTSL 326.79■■□□□ 1.882e-6■□□□□ 10.9
NKRFO15226 SSBP4-209ENST00000601357 606 ntTSL 526.36■■□□□ 1.812e-6■□□□□ 10.9
NKRFO15226 SSBP4-204ENST00000597724 865 ntTSL 519.27■□□□□ 0.682e-6■□□□□ 10.9
NKRFO15226 SSBP4-211ENST00000601614 628 ntTSL 218.95■□□□□ 0.622e-6■□□□□ 10.9
NKRFO15226 SSBP4-214ENST00000607020 504 ntTSL 317.76■□□□□ 0.432e-6■□□□□ 10.9
NKRFO15226 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.881e-7■□□□□ 10.9
NKRFO15226 DEAF1-207ENST00000527170 1623 ntTSL 1 (best)17.86■□□□□ 0.451e-7■□□□□ 10.9
NKRFO15226 DEAF1-204ENST00000525904 797 ntTSL 314.87□□□□□ -0.031e-7■□□□□ 10.9
NKRFO15226 DEAF1-212ENST00000530813 668 ntTSL 514.87□□□□□ -0.031e-7■□□□□ 10.9
NKRFO15226 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.059e-7■□□□□ 10.9
NKRFO15226 RBM14-RBM4-202ENST00000421355 2034 ntTSL 220.99■□□□□ 0.959e-7■□□□□ 10.9
NKRFO15226 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.47■□□□□ 0.879e-7■□□□□ 10.9
NKRFO15226 RBM14-RBM4-204ENST00000511114 523 ntTSL 414.19□□□□□ -0.149e-7■□□□□ 10.9
NKRFO15226 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.22e-8■□□□□ 10.9
NKRFO15226 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.811e-7■□□□□ 10.9
Retrieved 100 of 9,198 protein–RNA pairs in 113.3 ms