RNA–Protein interactions for RNA: ENST00000574722.5

RPH3AL-214, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-214ENST00000574722 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
RPH3AL-214ENST00000574722 CCDC180Q9P1Z9 1646 aa33.49■■■□□ 2.95
RPH3AL-214ENST00000574722 ABCC9O60706 1549 aa32.74■■■□□ 2.83
RPH3AL-214ENST00000574722 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
RPH3AL-214ENST00000574722 NACADO15069 1562 aa31.52■■■□□ 2.64
RPH3AL-214ENST00000574722 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
RPH3AL-214ENST00000574722 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
RPH3AL-214ENST00000574722 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
RPH3AL-214ENST00000574722 DCAF1Q9Y4B6 1507 aa31.15■■■□□ 2.58
RPH3AL-214ENST00000574722 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
RPH3AL-214ENST00000574722 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
RPH3AL-214ENST00000574722 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
RPH3AL-214ENST00000574722 SCRIBQ14160 1630 aa30.42■■■□□ 2.46
RPH3AL-214ENST00000574722 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
RPH3AL-214ENST00000574722 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
RPH3AL-214ENST00000574722 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
RPH3AL-214ENST00000574722 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
RPH3AL-214ENST00000574722 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
RPH3AL-214ENST00000574722 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
RPH3AL-214ENST00000574722 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
RPH3AL-214ENST00000574722 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
RPH3AL-214ENST00000574722 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
RPH3AL-214ENST00000574722 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
RPH3AL-214ENST00000574722 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
RPH3AL-214ENST00000574722 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
RPH3AL-214ENST00000574722 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
RPH3AL-214ENST00000574722 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
RPH3AL-214ENST00000574722 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
RPH3AL-214ENST00000574722 WIZO95785 1651 aa28.52■■■□□ 2.16
RPH3AL-214ENST00000574722 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
RPH3AL-214ENST00000574722 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.12
RPH3AL-214ENST00000574722 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
RPH3AL-214ENST00000574722 NESP48681 1621 aa28.25■■■□□ 2.11
RPH3AL-214ENST00000574722 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
RPH3AL-214ENST00000574722 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
RPH3AL-214ENST00000574722 CUX2O14529 1486 aa28.1■■■□□ 2.09
RPH3AL-214ENST00000574722 CFTRP13569 1480 aa28.01■■■□□ 2.07
RPH3AL-214ENST00000574722 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
RPH3AL-214ENST00000574722 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
RPH3AL-214ENST00000574722 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
RPH3AL-214ENST00000574722 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
RPH3AL-214ENST00000574722 FANCD2Q9BXW9 1451 aa27.85■■■□□ 2.05
RPH3AL-214ENST00000574722 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
RPH3AL-214ENST00000574722 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
RPH3AL-214ENST00000574722 WDR62O43379 1518 aa27.74■■■□□ 2.03
RPH3AL-214ENST00000574722 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
RPH3AL-214ENST00000574722 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
RPH3AL-214ENST00000574722 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
RPH3AL-214ENST00000574722 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
RPH3AL-214ENST00000574722 DNMBPQ6XZF7 1577 aa27.37■■□□□ 1.97
RPH3AL-214ENST00000574722 IFT140Q96RY7 1462 aa27.3■■□□□ 1.96
RPH3AL-214ENST00000574722 DNAJC5Q9H3Z4 198 aa27.29■■□□□ 1.96
RPH3AL-214ENST00000574722 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
RPH3AL-214ENST00000574722 CUX1P39880 1505 aa27.11■■□□□ 1.93
RPH3AL-214ENST00000574722 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
RPH3AL-214ENST00000574722 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
RPH3AL-214ENST00000574722 SOGA1O94964 1423 aa27.06■■□□□ 1.92
RPH3AL-214ENST00000574722 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
RPH3AL-214ENST00000574722 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
RPH3AL-214ENST00000574722 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.91
RPH3AL-214ENST00000574722 RAD54L2Q9Y4B4 1467 aa26.97■■□□□ 1.91
RPH3AL-214ENST00000574722 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
RPH3AL-214ENST00000574722 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.9
RPH3AL-214ENST00000574722 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
RPH3AL-214ENST00000574722 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
RPH3AL-214ENST00000574722 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
RPH3AL-214ENST00000574722 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
RPH3AL-214ENST00000574722 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
RPH3AL-214ENST00000574722 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
RPH3AL-214ENST00000574722 GRIN2BQ13224 1484 aa26.78■■□□□ 1.88
RPH3AL-214ENST00000574722 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
RPH3AL-214ENST00000574722 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
RPH3AL-214ENST00000574722 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
RPH3AL-214ENST00000574722 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
RPH3AL-214ENST00000574722 PBRM1Q86U86 1689 aa26.64■■□□□ 1.86
RPH3AL-214ENST00000574722 FBLN2P98095 1184 aa26.64■■□□□ 1.86
RPH3AL-214ENST00000574722 CHD1O14646 1710 aa26.63■■□□□ 1.85
RPH3AL-214ENST00000574722 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
RPH3AL-214ENST00000574722 CHMP7Q8WUX9 453 aaPredicted RBP26.61■■□□□ 1.85
RPH3AL-214ENST00000574722 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
RPH3AL-214ENST00000574722 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
RPH3AL-214ENST00000574722 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
RPH3AL-214ENST00000574722 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
RPH3AL-214ENST00000574722 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
RPH3AL-214ENST00000574722 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
RPH3AL-214ENST00000574722 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
RPH3AL-214ENST00000574722 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
RPH3AL-214ENST00000574722 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
RPH3AL-214ENST00000574722 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
RPH3AL-214ENST00000574722 NUP160Q12769 1436 aa26.31■■□□□ 1.8
RPH3AL-214ENST00000574722 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
RPH3AL-214ENST00000574722 IGF1RP08069 1367 aa26.28■■□□□ 1.8
RPH3AL-214ENST00000574722 CUL7Q14999 1698 aa26.28■■□□□ 1.8
RPH3AL-214ENST00000574722 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
RPH3AL-214ENST00000574722 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
RPH3AL-214ENST00000574722 CYB5RLQ6IPT4 315 aa26.14■■□□□ 1.78
RPH3AL-214ENST00000574722 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
RPH3AL-214ENST00000574722 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
RPH3AL-214ENST00000574722 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
RPH3AL-214ENST00000574722 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms