RNA–Protein interactions for RNA: ENST00000537140.5

CADM1-207, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 1,646 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-207ENST00000537140 NISCHQ9Y2I1 1504 aa51.34■■■■■ 5.81
CADM1-207ENST00000537140 CCDC180Q9P1Z9 1646 aa45.03■■■■■ 4.8
CADM1-207ENST00000537140 ZCCHC6Q5VYS8 1495 aaKnown RBP43.03■■■■■ 4.48
CADM1-207ENST00000537140 ABCC9O60706 1549 aa42.92■■■■■ 4.46
CADM1-207ENST00000537140 DCAF1Q9Y4B6 1507 aa42.55■■■■■ 4.4
CADM1-207ENST00000537140 DCAF8L2P0C7V8 631 aa42.41■■■■■ 4.38
CADM1-207ENST00000537140 MYO15BQ96JP2 1530 aa42.28■■■■■ 4.36
CADM1-207ENST00000537140 NACADO15069 1562 aa42.09■■■■■ 4.33
CADM1-207ENST00000537140 RB1CC1Q8TDY2 1594 aa41.82■■■■■ 4.29
CADM1-207ENST00000537140 SHROOM4Q9ULL8 1493 aa41.32■■■■■ 4.21
CADM1-207ENST00000537140 SCRIBQ14160 1630 aa41.21■■■■■ 4.19
CADM1-207ENST00000537140 UNC13AQ9UPW8 1703 aa40.8■■■■■ 4.12
CADM1-207ENST00000537140 BICRAQ9NZM4 1560 aa40.5■■■■■ 4.07
CADM1-207ENST00000537140 PABPN1Q86U42 306 aaKnown RBP eCLIP40.34■■■■■ 4.05
CADM1-207ENST00000537140 CECR2Q9BXF3 1484 aa39.85■■■■□ 3.97
CADM1-207ENST00000537140 BAZ1AQ9NRL2 1556 aaPredicted RBP39.7■■■■□ 3.95
CADM1-207ENST00000537140 RSF1Q96T23 1441 aaPredicted RBP39.61■■■■□ 3.93
CADM1-207ENST00000537140 MROH2BQ7Z745 1585 aa39.58■■■■□ 3.93
CADM1-207ENST00000537140 SUPT5HO00267 1087 aaKnown RBP39.54■■■■□ 3.92
CADM1-207ENST00000537140 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
CADM1-207ENST00000537140 EIF4G1Q04637 1599 aaKnown RBP39.35■■■■□ 3.89
CADM1-207ENST00000537140 WIZO95785 1651 aa39.19■■■■□ 3.86
CADM1-207ENST00000537140 PEG3Q9GZU2 1588 aa39.17■■■■□ 3.86
CADM1-207ENST00000537140 ATAD2BQ9ULI0 1458 aa39.06■■■■□ 3.84
CADM1-207ENST00000537140 SMARCA2P51531 1590 aa39.04■■■■□ 3.84
CADM1-207ENST00000537140 TOP2AP11388 1531 aaKnown RBP38.87■■■■□ 3.81
CADM1-207ENST00000537140 CC2D2AQ9P2K1 1620 aa38.86■■■■□ 3.81
CADM1-207ENST00000537140 NCAPD3P42695 1498 aa38.86■■■■□ 3.81
CADM1-207ENST00000537140 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
CADM1-207ENST00000537140 HMGXB3Q12766 1538 aa38.75■■■■□ 3.79
CADM1-207ENST00000537140 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
CADM1-207ENST00000537140 DNAJC5BQ9UF47 199 aa38.29■■■■□ 3.72
CADM1-207ENST00000537140 CFTRP13569 1480 aa37.83■■■■□ 3.65
CADM1-207ENST00000537140 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
CADM1-207ENST00000537140 CHIC1Q5VXU3 224 aa37.66■■■■□ 3.62
CADM1-207ENST00000537140 LAMC3Q9Y6N6 1575 aa37.6■■■■□ 3.61
CADM1-207ENST00000537140 PRDM2Q13029 1718 aa37.52■■■■□ 3.6
CADM1-207ENST00000537140 NESP48681 1621 aa37.5■■■■□ 3.59
CADM1-207ENST00000537140 ABCC8Q09428 1581 aa37.37■■■■□ 3.57
CADM1-207ENST00000537140 FANCD2Q9BXW9 1451 aa37.34■■■■□ 3.57
CADM1-207ENST00000537140 PDS5BQ9NTI5 1447 aa37.33■■■■□ 3.57
CADM1-207ENST00000537140 WRNQ14191 1432 aaPredicted RBP eCLIP37.31■■■■□ 3.56
CADM1-207ENST00000537140 TRIM41Q8WV44 630 aa37.31■■■■□ 3.56
CADM1-207ENST00000537140 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
CADM1-207ENST00000537140 SYNJ1O43426 1573 aa37.11■■■■□ 3.53
CADM1-207ENST00000537140 TOP2BQ02880 1626 aa37.07■■■■□ 3.52
CADM1-207ENST00000537140 CUX1P39880 1505 aa37.05■■■■□ 3.52
CADM1-207ENST00000537140 KIF21AQ7Z4S6 1674 aa37.04■■■■□ 3.52
CADM1-207ENST00000537140 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
CADM1-207ENST00000537140 DNMBPQ6XZF7 1577 aa36.93■■■■□ 3.5
CADM1-207ENST00000537140 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
CADM1-207ENST00000537140 TOPBP1Q92547 1522 aa36.88■■■■□ 3.49
CADM1-207ENST00000537140 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
CADM1-207ENST00000537140 MRC2Q9UBG0 1479 aa36.85■■■■□ 3.49
CADM1-207ENST00000537140 FGD5Q6ZNL6 1462 aa36.74■■■■□ 3.47
CADM1-207ENST00000537140 WDR62O43379 1518 aa36.69■■■■□ 3.46
CADM1-207ENST00000537140 POLA1P09884 1462 aaPredicted RBP36.66■■■■□ 3.46
CADM1-207ENST00000537140 THOC2Q8NI27 1593 aaKnown RBP36.64■■■■□ 3.46
CADM1-207ENST00000537140 SOGA1O94964 1423 aa36.61■■■■□ 3.45
CADM1-207ENST00000537140 EEA1Q15075 1411 aa36.58■■■■□ 3.45
CADM1-207ENST00000537140 FAM9AQ8IZU1 332 aaPredicted RBP36.48■■■■□ 3.43
CADM1-207ENST00000537140 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
CADM1-207ENST00000537140 RUSC2Q8N2Y8 1516 aa36.47■■■■□ 3.43
CADM1-207ENST00000537140 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
CADM1-207ENST00000537140 KIF27Q86VH2 1401 aa36.44■■■■□ 3.42
CADM1-207ENST00000537140 CUX2O14529 1486 aa36.41■■■■□ 3.42
CADM1-207ENST00000537140 CSRNP3Q8WYN3 585 aa36.36■■■■□ 3.41
CADM1-207ENST00000537140 IFT140Q96RY7 1462 aa36.35■■■■□ 3.41
CADM1-207ENST00000537140 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
CADM1-207ENST00000537140 WDR97A6NE52 1622 aa36.33■■■■□ 3.41
CADM1-207ENST00000537140 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
CADM1-207ENST00000537140 ABCA5Q8WWZ7 1642 aa36.17■■■■□ 3.38
CADM1-207ENST00000537140 IGF1RP08069 1367 aa36.15■■■■□ 3.38
CADM1-207ENST00000537140 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
CADM1-207ENST00000537140 LOC105371045A0A1W2PR82 267 aa36.11■■■■□ 3.37
CADM1-207ENST00000537140 KIF21BO75037 1637 aa36.06■■■■□ 3.36
CADM1-207ENST00000537140 PRXQ9BXM0 1461 aa36.06■■■■□ 3.36
CADM1-207ENST00000537140 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
CADM1-207ENST00000537140 ERICH3Q5RHP9 1530 aa36.04■■■■□ 3.36
CADM1-207ENST00000537140 AQRO60306 1485 aaKnown RBP eCLIP36.03■■■■□ 3.367e-6■■□□□ 13.1
CADM1-207ENST00000537140 GOLGA3Q08378 1498 aa35.98■■■■□ 3.35
CADM1-207ENST00000537140 CARMIL1Q5VZK9 1371 aa35.96■■■■□ 3.35
CADM1-207ENST00000537140 GRIN2BQ13224 1484 aa35.95■■■■□ 3.35
CADM1-207ENST00000537140 EIF4G3O43432 1585 aaKnown RBP35.95■■■■□ 3.35
CADM1-207ENST00000537140 CUL7Q14999 1698 aa35.92■■■■□ 3.34
CADM1-207ENST00000537140 RAPGEF2Q9Y4G8 1499 aa35.91■■■■□ 3.34
CADM1-207ENST00000537140 PBRM1Q86U86 1689 aa35.89■■■■□ 3.34
CADM1-207ENST00000537140 EHMT2Q96KQ7 1210 aa35.89■■■■□ 3.34
CADM1-207ENST00000537140 TNIKQ9UKE5 1360 aa35.79■■■■□ 3.32
CADM1-207ENST00000537140 UBTFP17480 764 aaKnown RBP35.78■■■■□ 3.32
CADM1-207ENST00000537140 FHAD1B1AJZ9 1412 aa35.77■■■■□ 3.32
CADM1-207ENST00000537140 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
CADM1-207ENST00000537140 ADAMTS12P58397 1594 aa35.73■■■■□ 3.31
CADM1-207ENST00000537140 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
CADM1-207ENST00000537140 SYNJ2O15056 1496 aa35.57■■■■□ 3.29
CADM1-207ENST00000537140 CEP162Q5TB80 1403 aa35.5■■■■□ 3.27
CADM1-207ENST00000537140 GRIN2AQ12879 1464 aa35.49■■■■□ 3.27
CADM1-207ENST00000537140 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
CADM1-207ENST00000537140 CTTNBP2Q8WZ74 1663 aa35.37■■■■□ 3.25
CADM1-207ENST00000537140 CLIP1P30622 1438 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms