RNA–Protein interactions for RNA: ENST00000402306.7

URGCP-202, Transcript of upregulator of cell proliferation, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene URGCP, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-202ENST00000402306 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
URGCP-202ENST00000402306 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
URGCP-202ENST00000402306 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
URGCP-202ENST00000402306 ABCC9O60706 1549 aa18.44■□□□□ 0.54
URGCP-202ENST00000402306 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
URGCP-202ENST00000402306 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
URGCP-202ENST00000402306 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
URGCP-202ENST00000402306 NACADO15069 1562 aa18.08■□□□□ 0.48
URGCP-202ENST00000402306 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
URGCP-202ENST00000402306 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
URGCP-202ENST00000402306 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
URGCP-202ENST00000402306 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
URGCP-202ENST00000402306 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
URGCP-202ENST00000402306 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
URGCP-202ENST00000402306 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
URGCP-202ENST00000402306 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
URGCP-202ENST00000402306 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
URGCP-202ENST00000402306 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
URGCP-202ENST00000402306 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
URGCP-202ENST00000402306 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
URGCP-202ENST00000402306 WIZO95785 1651 aa16.98■□□□□ 0.31
URGCP-202ENST00000402306 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
URGCP-202ENST00000402306 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
URGCP-202ENST00000402306 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
URGCP-202ENST00000402306 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
URGCP-202ENST00000402306 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
URGCP-202ENST00000402306 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
URGCP-202ENST00000402306 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
URGCP-202ENST00000402306 NCAPD3P42695 1498 aa16.71■□□□□ 0.26
URGCP-202ENST00000402306 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
URGCP-202ENST00000402306 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
URGCP-202ENST00000402306 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.25
URGCP-202ENST00000402306 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
URGCP-202ENST00000402306 TRIM41Q8WV44 630 aa16.33■□□□□ 0.21
URGCP-202ENST00000402306 CFTRP13569 1480 aa16.28■□□□□ 0.2
URGCP-202ENST00000402306 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
URGCP-202ENST00000402306 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
URGCP-202ENST00000402306 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
URGCP-202ENST00000402306 NESP48681 1621 aa16.2■□□□□ 0.18
URGCP-202ENST00000402306 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
URGCP-202ENST00000402306 HRCP23327 699 aa16.17■□□□□ 0.18
URGCP-202ENST00000402306 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
URGCP-202ENST00000402306 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
URGCP-202ENST00000402306 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
URGCP-202ENST00000402306 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
URGCP-202ENST00000402306 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
URGCP-202ENST00000402306 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
URGCP-202ENST00000402306 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
URGCP-202ENST00000402306 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.15
URGCP-202ENST00000402306 CUX1P39880 1505 aa16.02■□□□□ 0.15
URGCP-202ENST00000402306 TOP2BQ02880 1626 aa16■□□□□ 0.15
URGCP-202ENST00000402306 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
URGCP-202ENST00000402306 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
URGCP-202ENST00000402306 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
URGCP-202ENST00000402306 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
URGCP-202ENST00000402306 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
URGCP-202ENST00000402306 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
URGCP-202ENST00000402306 SOGA1O94964 1423 aa15.87■□□□□ 0.13
URGCP-202ENST00000402306 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
URGCP-202ENST00000402306 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
URGCP-202ENST00000402306 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
URGCP-202ENST00000402306 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
URGCP-202ENST00000402306 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
URGCP-202ENST00000402306 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
URGCP-202ENST00000402306 WDR62O43379 1518 aa15.8■□□□□ 0.12
URGCP-202ENST00000402306 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
URGCP-202ENST00000402306 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
URGCP-202ENST00000402306 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
URGCP-202ENST00000402306 EEA1Q15075 1411 aa15.75■□□□□ 0.11
URGCP-202ENST00000402306 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
URGCP-202ENST00000402306 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
URGCP-202ENST00000402306 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
URGCP-202ENST00000402306 CUX2O14529 1486 aa15.72■□□□□ 0.11
URGCP-202ENST00000402306 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
URGCP-202ENST00000402306 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
URGCP-202ENST00000402306 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
URGCP-202ENST00000402306 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
URGCP-202ENST00000402306 GOLGA3Q08378 1498 aa15.58■□□□□ 0.09
URGCP-202ENST00000402306 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
URGCP-202ENST00000402306 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
URGCP-202ENST00000402306 IGF1RP08069 1367 aa15.56■□□□□ 0.08
URGCP-202ENST00000402306 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
URGCP-202ENST00000402306 KIF21BO75037 1637 aa15.56■□□□□ 0.08
URGCP-202ENST00000402306 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
URGCP-202ENST00000402306 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
URGCP-202ENST00000402306 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
URGCP-202ENST00000402306 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
URGCP-202ENST00000402306 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
URGCP-202ENST00000402306 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
URGCP-202ENST00000402306 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
URGCP-202ENST00000402306 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
URGCP-202ENST00000402306 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■■■□ 21.7
URGCP-202ENST00000402306 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
URGCP-202ENST00000402306 CUL7Q14999 1698 aa15.46■□□□□ 0.07
URGCP-202ENST00000402306 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
URGCP-202ENST00000402306 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
URGCP-202ENST00000402306 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
URGCP-202ENST00000402306 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
URGCP-202ENST00000402306 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
URGCP-202ENST00000402306 CLIP1P30622 1438 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms