Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 USP19-209ENST00000464931 616 ntTSL 319.78■□□□□ 0.762e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-214ENST00000548993 790 ntTSL 519.74■□□□□ 0.752e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.752e-7■■■■□ 23.4
XRN2Q9H0D6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.712e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.712e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.72e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-208ENST00000565282 1247 ntTSL 1 (best)19.36■□□□□ 0.692e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-203ENST00000596070 1346 ntTSL 519.34■□□□□ 0.692e-7■■■■□ 23.4
XRN2Q9H0D6 CTTN-212ENST00000527962 587 ntTSL 219.33■□□□□ 0.683e-7■■■■□ 23.4
XRN2Q9H0D6 TM6SF2-202ENST00000431465 1829 ntTSL 219.3■□□□□ 0.682e-7■■■■□ 23.4
XRN2Q9H0D6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.25■□□□□ 0.671e-11■■■■□ 23.4
XRN2Q9H0D6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.19■□□□□ 0.662e-7■■■■□ 23.4
XRN2Q9H0D6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.633e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.622e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-206ENST00000563753 599 ntTSL 218.92■□□□□ 0.622e-7■■■■□ 23.4
XRN2Q9H0D6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.87■□□□□ 0.612e-7■■■■□ 23.4
XRN2Q9H0D6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.81■□□□□ 0.62e-7■■■■□ 23.4
XRN2Q9H0D6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.582e-7■■■■□ 23.4
XRN2Q9H0D6 FAAH-203ENST00000484697 1046 ntTSL 1 (best)18.66■□□□□ 0.582e-7■■■■□ 23.4
XRN2Q9H0D6 BAIAP2L1-203ENST00000473569 639 ntTSL 418.66■□□□□ 0.582e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.572e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-209ENST00000461611 643 ntTSL 318.61■□□□□ 0.572e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.542e-7■■■■□ 23.4
XRN2Q9H0D6 MIR6869-201ENST00000619434 62 ntBASIC18.41■□□□□ 0.542e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.532e-7■■■■□ 23.4
XRN2Q9H0D6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.522e-7■■■■□ 23.4
XRN2Q9H0D6 EXOSC4-203ENST00000527954 1065 ntTSL 218.29■□□□□ 0.522e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-213ENST00000531240 559 ntTSL 418.26■□□□□ 0.512e-7■■■■□ 23.4
XRN2Q9H0D6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.491e-6■■■■□ 23.4
XRN2Q9H0D6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.491e-6■■■■□ 23.4
XRN2Q9H0D6 POLRMT-207ENST00000592633 469 ntTSL 218.08■□□□□ 0.485e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-208ENST00000440228 620 ntTSL 418.07■□□□□ 0.482e-7■■■■□ 23.4
XRN2Q9H0D6 MYO15B-235ENST00000621743 8646 ntTSL 518.04■□□□□ 0.483e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.91■□□□□ 0.462e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.87■□□□□ 0.452e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.75■□□□□ 0.432e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-209ENST00000565325 858 ntTSL 217.74■□□□□ 0.432e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.67■□□□□ 0.422e-7■■■■□ 23.4
XRN2Q9H0D6 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 317.61■□□□□ 0.411e-6■■■■□ 23.4
XRN2Q9H0D6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.61■□□□□ 0.411e-6■■■■□ 23.4
XRN2Q9H0D6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.57■□□□□ 0.42e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-217ENST00000551886 586 ntTSL 217.48■□□□□ 0.392e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.382e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-207ENST00000564551 586 ntTSL 317.23■□□□□ 0.352e-7■■■■□ 23.4
XRN2Q9H0D6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.15■□□□□ 0.345e-6■■■■□ 23.4
XRN2Q9H0D6 TM6SF2-205ENST00000591001 1768 ntTSL 217.1■□□□□ 0.332e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-209ENST00000479266 567 ntTSL 317.09■□□□□ 0.332e-7■■■■□ 23.4
XRN2Q9H0D6 PRKCZ-214ENST00000478770 1542 ntTSL 216.96■□□□□ 0.32e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-206ENST00000589760 848 ntTSL 516.87■□□□□ 0.292e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.292e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.292e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.272e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.252e-7■■■■□ 23.4
XRN2Q9H0D6 USP42-207ENST00000521713 5017 ntTSL 516.6■□□□□ 0.252e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.252e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-212ENST00000486962 550 ntTSL 316.57■□□□□ 0.242e-7■■■■□ 23.4
XRN2Q9H0D6 BOP1-203ENST00000569160 734 ntTSL 216.5■□□□□ 0.232e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-213ENST00000548697 587 ntTSL 516.41■□□□□ 0.222e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.36■□□□□ 0.212e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-211ENST00000479073 360 ntTSL 516.28■□□□□ 0.22e-7■■■■□ 23.4
XRN2Q9H0D6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.182e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.172e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-206ENST00000597326 480 ntTSL 515.95■□□□□ 0.142e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.142e-7■■■■□ 23.4
XRN2Q9H0D6 BANP-221ENST00000497491 739 ntTSL 515.84■□□□□ 0.132e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-203ENST00000502795 580 ntTSL 415.84■□□□□ 0.132e-7■■■■□ 23.4
XRN2Q9H0D6 DNM2-219ENST00000591818 538 ntTSL 415.79■□□□□ 0.122e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-216ENST00000564468 929 ntTSL 315.73■□□□□ 0.112e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-218ENST00000566926 646 ntTSL 515.73■□□□□ 0.112e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-213ENST00000563842 860 ntTSL 515.73■□□□□ 0.112e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.49■□□□□ 0.072e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC15.46■□□□□ 0.072e-7■■■■□ 23.4
XRN2Q9H0D6 MYO15B-237ENST00000642007 4893 ntBASIC15.32■□□□□ 0.043e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-207ENST00000589937 540 ntTSL 415.28■□□□□ 0.042e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC15.19■□□□□ 0.022e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-202ENST00000594780 1007 ntTSL 215.17■□□□□ 0.022e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.022e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.022e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-208ENST00000478277 370 ntTSL 315.14■□□□□ 0.012e-7■■■■□ 23.4
XRN2Q9H0D6 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -01e-11■■■■□ 23.4
XRN2Q9H0D6 CLK3-204ENST00000483723 1749 ntTSL 214.91□□□□□ -0.022e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-209ENST00000510872 577 ntTSL 414.84□□□□□ -0.032e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.052e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.062e-7■■■■□ 23.4
XRN2Q9H0D6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.69□□□□□ -0.065e-6■■■■□ 23.4
XRN2Q9H0D6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.072e-7■■■■□ 23.4
XRN2Q9H0D6 H2AFY-206ENST00000504197 498 ntTSL 214.61□□□□□ -0.076e-14■■■■□ 23.4
XRN2Q9H0D6 DNM2-215ENST00000590806 5651 ntTSL 214.48□□□□□ -0.092e-7■■■■□ 23.4
XRN2Q9H0D6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.15e-6■■■■□ 23.4
XRN2Q9H0D6 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.43□□□□□ -0.12e-7■■■■□ 23.4
XRN2Q9H0D6 H2AFY-219ENST00000513210 775 ntTSL 214.35□□□□□ -0.116e-14■■■■□ 23.4
XRN2Q9H0D6 CTTN-210ENST00000525852 1470 ntTSL 514.3□□□□□ -0.123e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-215ENST00000496768 790 ntTSL 314.29□□□□□ -0.122e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-214ENST00000492411 823 ntTSL 514.29□□□□□ -0.122e-7■■■■□ 23.4
XRN2Q9H0D6 CARM1-208ENST00000590039 596 ntTSL 514.17□□□□□ -0.142e-7■■■■□ 23.4
XRN2Q9H0D6 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.152e-7■■■■□ 23.4
XRN2Q9H0D6 CLPP-204ENST00000596149 745 ntTSL 2 BASIC14.07□□□□□ -0.162e-7■■■■□ 23.4
XRN2Q9H0D6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.162e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-203ENST00000454830 3787 ntTSL 514.05□□□□□ -0.162e-7■■■■□ 23.4
Retrieved 100 of 21,068 protein–RNA pairs in 151.9 ms