RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
RFX1-207ENST00000589937 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
RFX1-207ENST00000589937 ABCC9O60706 1549 aa28.28■■■□□ 2.12
RFX1-207ENST00000589937 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
RFX1-207ENST00000589937 NACADO15069 1562 aa26.79■■□□□ 1.88
RFX1-207ENST00000589937 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
RFX1-207ENST00000589937 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
RFX1-207ENST00000589937 MYO15BQ96JP2 1530 aa26.43■■□□□ 1.82
RFX1-207ENST00000589937 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
RFX1-207ENST00000589937 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
RFX1-207ENST00000589937 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
RFX1-207ENST00000589937 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
RFX1-207ENST00000589937 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
RFX1-207ENST00000589937 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
RFX1-207ENST00000589937 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
RFX1-207ENST00000589937 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
RFX1-207ENST00000589937 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
RFX1-207ENST00000589937 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
RFX1-207ENST00000589937 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
RFX1-207ENST00000589937 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.55
RFX1-207ENST00000589937 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
RFX1-207ENST00000589937 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
RFX1-207ENST00000589937 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
RFX1-207ENST00000589937 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
RFX1-207ENST00000589937 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
RFX1-207ENST00000589937 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
RFX1-207ENST00000589937 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
RFX1-207ENST00000589937 NESP48681 1621 aa24.4■■□□□ 1.5
RFX1-207ENST00000589937 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
RFX1-207ENST00000589937 WIZO95785 1651 aa24.33■■□□□ 1.49
RFX1-207ENST00000589937 CUX2O14529 1486 aa24.2■■□□□ 1.47
RFX1-207ENST00000589937 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
RFX1-207ENST00000589937 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
RFX1-207ENST00000589937 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
RFX1-207ENST00000589937 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
RFX1-207ENST00000589937 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
RFX1-207ENST00000589937 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
RFX1-207ENST00000589937 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
RFX1-207ENST00000589937 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
RFX1-207ENST00000589937 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
RFX1-207ENST00000589937 WDR62O43379 1518 aa23.78■■□□□ 1.4
RFX1-207ENST00000589937 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
RFX1-207ENST00000589937 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
RFX1-207ENST00000589937 CFTRP13569 1480 aa23.75■■□□□ 1.39
RFX1-207ENST00000589937 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
RFX1-207ENST00000589937 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
RFX1-207ENST00000589937 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
RFX1-207ENST00000589937 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
RFX1-207ENST00000589937 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
RFX1-207ENST00000589937 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
RFX1-207ENST00000589937 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
RFX1-207ENST00000589937 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
RFX1-207ENST00000589937 TARBP1Q13395 1621 aaKnown RBP23.18■■□□□ 1.3
RFX1-207ENST00000589937 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
RFX1-207ENST00000589937 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
RFX1-207ENST00000589937 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
RFX1-207ENST00000589937 CHD1O14646 1710 aa23.06■■□□□ 1.28
RFX1-207ENST00000589937 CUX1P39880 1505 aa23.06■■□□□ 1.28
RFX1-207ENST00000589937 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
RFX1-207ENST00000589937 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.289e-7■■■■■ 31.2
RFX1-207ENST00000589937 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
RFX1-207ENST00000589937 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
RFX1-207ENST00000589937 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
RFX1-207ENST00000589937 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
RFX1-207ENST00000589937 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
RFX1-207ENST00000589937 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
RFX1-207ENST00000589937 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
RFX1-207ENST00000589937 SOGA1O94964 1423 aa22.92■■□□□ 1.26
RFX1-207ENST00000589937 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
RFX1-207ENST00000589937 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
RFX1-207ENST00000589937 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
RFX1-207ENST00000589937 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
RFX1-207ENST00000589937 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
RFX1-207ENST00000589937 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
RFX1-207ENST00000589937 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
RFX1-207ENST00000589937 FBLN2P98095 1184 aa22.75■■□□□ 1.23
RFX1-207ENST00000589937 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
RFX1-207ENST00000589937 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
RFX1-207ENST00000589937 MAGI1Q96QZ7 1491 aaPredicted RBP22.72■■□□□ 1.23
RFX1-207ENST00000589937 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
RFX1-207ENST00000589937 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
RFX1-207ENST00000589937 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
RFX1-207ENST00000589937 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
RFX1-207ENST00000589937 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
RFX1-207ENST00000589937 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
RFX1-207ENST00000589937 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
RFX1-207ENST00000589937 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
RFX1-207ENST00000589937 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
RFX1-207ENST00000589937 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
RFX1-207ENST00000589937 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
RFX1-207ENST00000589937 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
RFX1-207ENST00000589937 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
RFX1-207ENST00000589937 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
RFX1-207ENST00000589937 NUP160Q12769 1436 aa22.38■■□□□ 1.17
RFX1-207ENST00000589937 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
RFX1-207ENST00000589937 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
RFX1-207ENST00000589937 CUL7Q14999 1698 aa22.21■■□□□ 1.15
RFX1-207ENST00000589937 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
RFX1-207ENST00000589937 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
RFX1-207ENST00000589937 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms