RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
CLPP-202ENST00000594780 ABCC9O60706 1549 aa28.95■■■□□ 2.23
CLPP-202ENST00000594780 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
CLPP-202ENST00000594780 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
CLPP-202ENST00000594780 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
CLPP-202ENST00000594780 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
CLPP-202ENST00000594780 NACADO15069 1562 aa26.82■■□□□ 1.88
CLPP-202ENST00000594780 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
CLPP-202ENST00000594780 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
CLPP-202ENST00000594780 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
CLPP-202ENST00000594780 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
CLPP-202ENST00000594780 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
CLPP-202ENST00000594780 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
CLPP-202ENST00000594780 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
CLPP-202ENST00000594780 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
CLPP-202ENST00000594780 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
CLPP-202ENST00000594780 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
CLPP-202ENST00000594780 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
CLPP-202ENST00000594780 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
CLPP-202ENST00000594780 CUX2O14529 1486 aa25.23■■□□□ 1.63
CLPP-202ENST00000594780 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
CLPP-202ENST00000594780 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
CLPP-202ENST00000594780 NESP48681 1621 aa24.71■■□□□ 1.55
CLPP-202ENST00000594780 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
CLPP-202ENST00000594780 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
CLPP-202ENST00000594780 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
CLPP-202ENST00000594780 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
CLPP-202ENST00000594780 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
CLPP-202ENST00000594780 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CLPP-202ENST00000594780 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
CLPP-202ENST00000594780 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
CLPP-202ENST00000594780 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
CLPP-202ENST00000594780 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
CLPP-202ENST00000594780 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
CLPP-202ENST00000594780 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
CLPP-202ENST00000594780 WDR62O43379 1518 aa24.1■■□□□ 1.45
CLPP-202ENST00000594780 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
CLPP-202ENST00000594780 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
CLPP-202ENST00000594780 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
CLPP-202ENST00000594780 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
CLPP-202ENST00000594780 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
CLPP-202ENST00000594780 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
CLPP-202ENST00000594780 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
CLPP-202ENST00000594780 WIZO95785 1651 aa23.81■■□□□ 1.4
CLPP-202ENST00000594780 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
CLPP-202ENST00000594780 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
CLPP-202ENST00000594780 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
CLPP-202ENST00000594780 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
CLPP-202ENST00000594780 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
CLPP-202ENST00000594780 CFTRP13569 1480 aa23.54■■□□□ 1.36
CLPP-202ENST00000594780 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
CLPP-202ENST00000594780 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
CLPP-202ENST00000594780 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
CLPP-202ENST00000594780 CHD1O14646 1710 aa23.37■■□□□ 1.33
CLPP-202ENST00000594780 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
CLPP-202ENST00000594780 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
CLPP-202ENST00000594780 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
CLPP-202ENST00000594780 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
CLPP-202ENST00000594780 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
CLPP-202ENST00000594780 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
CLPP-202ENST00000594780 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
CLPP-202ENST00000594780 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
CLPP-202ENST00000594780 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
CLPP-202ENST00000594780 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
CLPP-202ENST00000594780 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.298e-7■■■■□ 22.4
CLPP-202ENST00000594780 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
CLPP-202ENST00000594780 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
CLPP-202ENST00000594780 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
CLPP-202ENST00000594780 FBLN2P98095 1184 aa22.94■■□□□ 1.26
CLPP-202ENST00000594780 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
CLPP-202ENST00000594780 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
CLPP-202ENST00000594780 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
CLPP-202ENST00000594780 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
CLPP-202ENST00000594780 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
CLPP-202ENST00000594780 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
CLPP-202ENST00000594780 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
CLPP-202ENST00000594780 MAGI1Q96QZ7 1491 aaPredicted RBP22.72■■□□□ 1.23
CLPP-202ENST00000594780 SOGA1O94964 1423 aa22.7■■□□□ 1.22
CLPP-202ENST00000594780 PBRM1Q86U86 1689 aa22.67■■□□□ 1.22
CLPP-202ENST00000594780 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
CLPP-202ENST00000594780 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
CLPP-202ENST00000594780 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
CLPP-202ENST00000594780 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
CLPP-202ENST00000594780 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
CLPP-202ENST00000594780 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
CLPP-202ENST00000594780 CUX1P39880 1505 aa22.57■■□□□ 1.2
CLPP-202ENST00000594780 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
CLPP-202ENST00000594780 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
CLPP-202ENST00000594780 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
CLPP-202ENST00000594780 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
CLPP-202ENST00000594780 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
CLPP-202ENST00000594780 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
CLPP-202ENST00000594780 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
CLPP-202ENST00000594780 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
CLPP-202ENST00000594780 ILDR1Q86SU0 546 aaPredicted RBP22.35■■□□□ 1.17
CLPP-202ENST00000594780 NUP160Q12769 1436 aa22.34■■□□□ 1.17
CLPP-202ENST00000594780 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
CLPP-202ENST00000594780 KDM4FA0A1W2PPD8 638 aa22.26■■□□□ 1.15
CLPP-202ENST00000594780 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
CLPP-202ENST00000594780 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms