RNA–Protein interactions for RNA: ENST00000431465.2

TM6SF2-202, Transcript of transmembrane 6 superfamily member 2, humanhuman

TSL 2

Gene TM6SF2, Length 1,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-202ENST00000431465 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
TM6SF2-202ENST00000431465 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
TM6SF2-202ENST00000431465 ZCCHC6Q5VYS8 1495 aaKnown RBP34.15■■■■□ 3.06
TM6SF2-202ENST00000431465 ABCC9O60706 1549 aa33.83■■■■□ 3.01
TM6SF2-202ENST00000431465 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
TM6SF2-202ENST00000431465 DCAF1Q9Y4B6 1507 aa33.64■■■□□ 2.98
TM6SF2-202ENST00000431465 MYO15BQ96JP2 1530 aa33.31■■■□□ 2.92
TM6SF2-202ENST00000431465 NACADO15069 1562 aa33.19■■■□□ 2.9
TM6SF2-202ENST00000431465 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
TM6SF2-202ENST00000431465 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
TM6SF2-202ENST00000431465 SCRIBQ14160 1630 aa32.71■■■□□ 2.83
TM6SF2-202ENST00000431465 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
TM6SF2-202ENST00000431465 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
TM6SF2-202ENST00000431465 PABPN1Q86U42 306 aaKnown RBP eCLIP31.9■■■□□ 2.7
TM6SF2-202ENST00000431465 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
TM6SF2-202ENST00000431465 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
TM6SF2-202ENST00000431465 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
TM6SF2-202ENST00000431465 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
TM6SF2-202ENST00000431465 MROH2BQ7Z745 1585 aa31.45■■■□□ 2.62
TM6SF2-202ENST00000431465 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
TM6SF2-202ENST00000431465 WIZO95785 1651 aa31.18■■■□□ 2.58
TM6SF2-202ENST00000431465 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
TM6SF2-202ENST00000431465 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
TM6SF2-202ENST00000431465 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
TM6SF2-202ENST00000431465 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
TM6SF2-202ENST00000431465 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
TM6SF2-202ENST00000431465 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
TM6SF2-202ENST00000431465 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
TM6SF2-202ENST00000431465 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
TM6SF2-202ENST00000431465 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
TM6SF2-202ENST00000431465 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
TM6SF2-202ENST00000431465 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
TM6SF2-202ENST00000431465 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
TM6SF2-202ENST00000431465 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
TM6SF2-202ENST00000431465 CFTRP13569 1480 aa29.91■■■□□ 2.38
TM6SF2-202ENST00000431465 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
TM6SF2-202ENST00000431465 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
TM6SF2-202ENST00000431465 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
TM6SF2-202ENST00000431465 WRNQ14191 1432 aaPredicted RBP eCLIP29.7■■■□□ 2.34
TM6SF2-202ENST00000431465 NESP48681 1621 aa29.63■■■□□ 2.33
TM6SF2-202ENST00000431465 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
TM6SF2-202ENST00000431465 SYNJ1O43426 1573 aa29.55■■■□□ 2.32
TM6SF2-202ENST00000431465 FANCD2Q9BXW9 1451 aa29.52■■■□□ 2.32
TM6SF2-202ENST00000431465 TOP2BQ02880 1626 aa29.45■■■□□ 2.31
TM6SF2-202ENST00000431465 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
TM6SF2-202ENST00000431465 CUX1P39880 1505 aa29.42■■■□□ 2.3
TM6SF2-202ENST00000431465 BIVM-ERCC5R4GMW8 1640 aa29.41■■■□□ 2.3
TM6SF2-202ENST00000431465 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
TM6SF2-202ENST00000431465 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
TM6SF2-202ENST00000431465 SOGA1O94964 1423 aa29.27■■■□□ 2.28
TM6SF2-202ENST00000431465 KIF21AQ7Z4S6 1674 aa29.26■■■□□ 2.27
TM6SF2-202ENST00000431465 DNMBPQ6XZF7 1577 aa29.21■■■□□ 2.27
TM6SF2-202ENST00000431465 LOC105371045A0A1W2PR82 267 aa29.19■■■□□ 2.26
TM6SF2-202ENST00000431465 EEA1Q15075 1411 aa29.19■■■□□ 2.26
TM6SF2-202ENST00000431465 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
TM6SF2-202ENST00000431465 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
TM6SF2-202ENST00000431465 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.26
TM6SF2-202ENST00000431465 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.26
TM6SF2-202ENST00000431465 CSRNP3Q8WYN3 585 aa29.07■■■□□ 2.24
TM6SF2-202ENST00000431465 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
TM6SF2-202ENST00000431465 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
TM6SF2-202ENST00000431465 POLA1P09884 1462 aaPredicted RBP29.02■■■□□ 2.24
TM6SF2-202ENST00000431465 EHMT2Q96KQ7 1210 aa29.01■■■□□ 2.23
TM6SF2-202ENST00000431465 KIF27Q86VH2 1401 aa28.98■■■□□ 2.23
TM6SF2-202ENST00000431465 CUX2O14529 1486 aa28.93■■■□□ 2.22
TM6SF2-202ENST00000431465 RAD54L2Q9Y4B4 1467 aa28.93■■■□□ 2.22
TM6SF2-202ENST00000431465 WDR62O43379 1518 aa28.87■■■□□ 2.21
TM6SF2-202ENST00000431465 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
TM6SF2-202ENST00000431465 THOC2Q8NI27 1593 aaKnown RBP28.81■■■□□ 2.2
TM6SF2-202ENST00000431465 KIF21BO75037 1637 aa28.78■■■□□ 2.2
TM6SF2-202ENST00000431465 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
TM6SF2-202ENST00000431465 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
TM6SF2-202ENST00000431465 TARBP1Q13395 1621 aaKnown RBP28.73■■■□□ 2.19
TM6SF2-202ENST00000431465 UBTFP17480 764 aaKnown RBP28.72■■■□□ 2.19
TM6SF2-202ENST00000431465 IGF1RP08069 1367 aa28.72■■■□□ 2.19
TM6SF2-202ENST00000431465 PRXQ9BXM0 1461 aa28.7■■■□□ 2.19
TM6SF2-202ENST00000431465 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
TM6SF2-202ENST00000431465 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
TM6SF2-202ENST00000431465 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
TM6SF2-202ENST00000431465 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
TM6SF2-202ENST00000431465 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
TM6SF2-202ENST00000431465 ABCA5Q8WWZ7 1642 aa28.63■■■□□ 2.17
TM6SF2-202ENST00000431465 GAPVD1Q14C86 1478 aa28.62■■■□□ 2.17
TM6SF2-202ENST00000431465 CARMIL1Q5VZK9 1371 aa28.59■■■□□ 2.17
TM6SF2-202ENST00000431465 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.16
TM6SF2-202ENST00000431465 CUL7Q14999 1698 aa28.5■■■□□ 2.15
TM6SF2-202ENST00000431465 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
TM6SF2-202ENST00000431465 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
TM6SF2-202ENST00000431465 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
TM6SF2-202ENST00000431465 GRIN2BQ13224 1484 aa28.42■■■□□ 2.14
TM6SF2-202ENST00000431465 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
TM6SF2-202ENST00000431465 CLIP1P30622 1438 aa28.32■■■□□ 2.12
TM6SF2-202ENST00000431465 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
TM6SF2-202ENST00000431465 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
TM6SF2-202ENST00000431465 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
TM6SF2-202ENST00000431465 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
TM6SF2-202ENST00000431465 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
TM6SF2-202ENST00000431465 CTTNBP2Q8WZ74 1663 aa28.15■■■□□ 2.1
TM6SF2-202ENST00000431465 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
TM6SF2-202ENST00000431465 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms