RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
EXOSC4-203ENST00000527954 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
EXOSC4-203ENST00000527954 ABCC9O60706 1549 aa33.54■■■□□ 2.96
EXOSC4-203ENST00000527954 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
EXOSC4-203ENST00000527954 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
EXOSC4-203ENST00000527954 NACADO15069 1562 aa31.78■■■□□ 2.68
EXOSC4-203ENST00000527954 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
EXOSC4-203ENST00000527954 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
EXOSC4-203ENST00000527954 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
EXOSC4-203ENST00000527954 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
EXOSC4-203ENST00000527954 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
EXOSC4-203ENST00000527954 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
EXOSC4-203ENST00000527954 BICRAQ9NZM4 1560 aa31.04■■■□□ 2.56
EXOSC4-203ENST00000527954 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
EXOSC4-203ENST00000527954 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
EXOSC4-203ENST00000527954 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
EXOSC4-203ENST00000527954 EIF4G1Q04637 1599 aaKnown RBP30.25■■■□□ 2.43
EXOSC4-203ENST00000527954 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
EXOSC4-203ENST00000527954 NCAPD3P42695 1498 aa29.37■■■□□ 2.29
EXOSC4-203ENST00000527954 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
EXOSC4-203ENST00000527954 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
EXOSC4-203ENST00000527954 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
EXOSC4-203ENST00000527954 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
EXOSC4-203ENST00000527954 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
EXOSC4-203ENST00000527954 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
EXOSC4-203ENST00000527954 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
EXOSC4-203ENST00000527954 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
EXOSC4-203ENST00000527954 ERCC6Q03468 1493 aa28.93■■■□□ 2.22
EXOSC4-203ENST00000527954 NESP48681 1621 aa28.87■■■□□ 2.21
EXOSC4-203ENST00000527954 CUX2O14529 1486 aa28.78■■■□□ 2.2
EXOSC4-203ENST00000527954 WIZO95785 1651 aa28.68■■■□□ 2.18
EXOSC4-203ENST00000527954 LAMC3Q9Y6N6 1575 aa28.65■■■□□ 2.18
EXOSC4-203ENST00000527954 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
EXOSC4-203ENST00000527954 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
EXOSC4-203ENST00000527954 PDS5BQ9NTI5 1447 aa28.51■■■□□ 2.15
EXOSC4-203ENST00000527954 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
EXOSC4-203ENST00000527954 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
EXOSC4-203ENST00000527954 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
EXOSC4-203ENST00000527954 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
EXOSC4-203ENST00000527954 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
EXOSC4-203ENST00000527954 CFTRP13569 1480 aa28.21■■■□□ 2.11
EXOSC4-203ENST00000527954 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
EXOSC4-203ENST00000527954 CEP164Q9UPV0 1460 aa28.17■■■□□ 2.1
EXOSC4-203ENST00000527954 WDR62O43379 1518 aa28.14■■■□□ 2.1
EXOSC4-203ENST00000527954 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
EXOSC4-203ENST00000527954 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
EXOSC4-203ENST00000527954 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
EXOSC4-203ENST00000527954 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
EXOSC4-203ENST00000527954 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
EXOSC4-203ENST00000527954 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
EXOSC4-203ENST00000527954 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
EXOSC4-203ENST00000527954 OSCARQ8IYS5 282 aa27.56■■■□□ 2
EXOSC4-203ENST00000527954 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
EXOSC4-203ENST00000527954 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
EXOSC4-203ENST00000527954 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
EXOSC4-203ENST00000527954 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
EXOSC4-203ENST00000527954 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
EXOSC4-203ENST00000527954 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
EXOSC4-203ENST00000527954 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.971e-11■■■□□ 19.1
EXOSC4-203ENST00000527954 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
EXOSC4-203ENST00000527954 SOGA1O94964 1423 aa27.3■■□□□ 1.96
EXOSC4-203ENST00000527954 CUX1P39880 1505 aa27.26■■□□□ 1.95
EXOSC4-203ENST00000527954 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
EXOSC4-203ENST00000527954 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
EXOSC4-203ENST00000527954 FBLN2P98095 1184 aa27.18■■□□□ 1.94
EXOSC4-203ENST00000527954 CHD1O14646 1710 aa27.13■■□□□ 1.93
EXOSC4-203ENST00000527954 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
EXOSC4-203ENST00000527954 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
EXOSC4-203ENST00000527954 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
EXOSC4-203ENST00000527954 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
EXOSC4-203ENST00000527954 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
EXOSC4-203ENST00000527954 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
EXOSC4-203ENST00000527954 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
EXOSC4-203ENST00000527954 CHMP7Q8WUX9 453 aaPredicted RBP26.99■■□□□ 1.91
EXOSC4-203ENST00000527954 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
EXOSC4-203ENST00000527954 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
EXOSC4-203ENST00000527954 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
EXOSC4-203ENST00000527954 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
EXOSC4-203ENST00000527954 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
EXOSC4-203ENST00000527954 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
EXOSC4-203ENST00000527954 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
EXOSC4-203ENST00000527954 TOP2BQ02880 1626 aa26.86■■□□□ 1.89
EXOSC4-203ENST00000527954 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
EXOSC4-203ENST00000527954 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
EXOSC4-203ENST00000527954 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
EXOSC4-203ENST00000527954 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
EXOSC4-203ENST00000527954 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
EXOSC4-203ENST00000527954 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
EXOSC4-203ENST00000527954 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
EXOSC4-203ENST00000527954 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
EXOSC4-203ENST00000527954 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
EXOSC4-203ENST00000527954 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
EXOSC4-203ENST00000527954 NUP160Q12769 1436 aa26.56■■□□□ 1.84
EXOSC4-203ENST00000527954 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
EXOSC4-203ENST00000527954 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
EXOSC4-203ENST00000527954 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
EXOSC4-203ENST00000527954 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
EXOSC4-203ENST00000527954 IGF1RP08069 1367 aa26.36■■□□□ 1.81
EXOSC4-203ENST00000527954 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
EXOSC4-203ENST00000527954 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms